RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TMEM92Q6UXU6 159 aa8.95□□□□□ -0.98
SF3B6-202ENST00000478050 PTGER2P43116 358 aa8.93□□□□□ -0.98
SF3B6-202ENST00000478050 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
SF3B6-202ENST00000478050 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
SF3B6-202ENST00000478050 ANKRD13DQ6ZTN6 518 aa8.92□□□□□ -0.98
SF3B6-202ENST00000478050 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
SF3B6-202ENST00000478050 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.98
SF3B6-202ENST00000478050 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-202ENST00000478050 ZFP91Q96JP5 570 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-202ENST00000478050 MS4A4AQ96JQ5 239 aa8.89□□□□□ -0.99
SF3B6-202ENST00000478050 VGFO15240 615 aaPredicted RBP8.88□□□□□ -0.99
SF3B6-202ENST00000478050 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
SF3B6-202ENST00000478050 ZNF316A6NFI3 1004 aaPredicted RBP8.86□□□□□ -0.99
SF3B6-202ENST00000478050 NLRP6P59044 892 aa8.85□□□□□ -0.99
SF3B6-202ENST00000478050 KHSRPQ92945 711 aaKnown RBP eCLIP8.84□□□□□ -0.99
SF3B6-202ENST00000478050 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
SF3B6-202ENST00000478050 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
SF3B6-202ENST00000478050 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
SF3B6-202ENST00000478050 ZCCHC6Q5VYS8 1495 aaKnown RBP8.79□□□□□ -1
SF3B6-202ENST00000478050 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
SF3B6-202ENST00000478050 BCL11BQ9C0K0 894 aaPredicted RBP8.78□□□□□ -1
SF3B6-202ENST00000478050 PBX2P40425 430 aa8.77□□□□□ -1.01
SF3B6-202ENST00000478050 STK24Q9Y6E0 443 aa8.77□□□□□ -1.01
SF3B6-202ENST00000478050 NUDT7P0C024 238 aa8.76□□□□□ -1.01
SF3B6-202ENST00000478050 FBXO22Q8NEZ5 403 aa8.75□□□□□ -1.01
SF3B6-202ENST00000478050 C2orf72A6NCS6 295 aa8.74□□□□□ -1.01
SF3B6-202ENST00000478050 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
SF3B6-202ENST00000478050 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SF3B6-202ENST00000478050 HCSTQ9UBK5 93 aa8.72□□□□□ -1.01
SF3B6-202ENST00000478050 LHX6Q9UPM6 363 aa8.72□□□□□ -1.01
SF3B6-202ENST00000478050 PCDHGA4Q9Y5G9 962 aa8.71□□□□□ -1.02
SF3B6-202ENST00000478050 STK25O00506 426 aa8.7□□□□□ -1.02
SF3B6-202ENST00000478050 KIF3CO14782 793 aa8.7□□□□□ -1.02
SF3B6-202ENST00000478050 TMC2Q8TDI7 906 aa8.7□□□□□ -1.02
SF3B6-202ENST00000478050 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
SF3B6-202ENST00000478050 SLC34A2O95436 690 aa8.68□□□□□ -1.02
SF3B6-202ENST00000478050 CUX2O14529 1486 aa8.67□□□□□ -1.02
SF3B6-202ENST00000478050 PSDA5PKW4 1024 aaPredicted RBP8.66□□□□□ -1.02
SF3B6-202ENST00000478050 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
SF3B6-202ENST00000478050 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.02
SF3B6-202ENST00000478050 ARHGAP33O14559 1287 aa8.65□□□□□ -1.02
SF3B6-202ENST00000478050 ADGRD1Q6QNK2 874 aa8.65□□□□□ -1.02
SF3B6-202ENST00000478050 STAC3Q96MF2 364 aa8.63□□□□□ -1.03
SF3B6-202ENST00000478050 SHROOM4Q9ULL8 1493 aa8.63□□□□□ -1.03
SF3B6-202ENST00000478050 DCAF1Q9Y4B6 1507 aa8.62□□□□□ -1.03
SF3B6-202ENST00000478050 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
SF3B6-202ENST00000478050 NACADO15069 1562 aa8.61□□□□□ -1.03
SF3B6-202ENST00000478050 TK2O00142 265 aa8.59□□□□□ -1.03
SF3B6-202ENST00000478050 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
SF3B6-202ENST00000478050 PSEN2P49810 448 aa8.56□□□□□ -1.04
SF3B6-202ENST00000478050 PPP4R3BQ5MIZ7 849 aa8.56□□□□□ -1.04
SF3B6-202ENST00000478050 KCNH8Q96L42 1107 aa8.56□□□□□ -1.04
SF3B6-202ENST00000478050 TBC1D12O60347 775 aa8.55□□□□□ -1.04
SF3B6-202ENST00000478050 DMRTA1Q5VZB9 504 aa8.55□□□□□ -1.04
SF3B6-202ENST00000478050 PTCD2Q8WV60 388 aaKnown RBP8.55□□□□□ -1.04
SF3B6-202ENST00000478050 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
SF3B6-202ENST00000478050 UNC13AQ9UPW8 1703 aa8.54□□□□□ -1.04
SF3B6-202ENST00000478050 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
SF3B6-202ENST00000478050 HRO43593 1189 aa8.53□□□□□ -1.04
SF3B6-202ENST00000478050 PPP1R37O75864 691 aa8.53□□□□□ -1.04
SF3B6-202ENST00000478050 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
SF3B6-202ENST00000478050 PLPP6Q8IY26 295 aa8.52□□□□□ -1.05
SF3B6-202ENST00000478050 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
SF3B6-202ENST00000478050 KDM4FA0A1W2PPD8 638 aa8.5□□□□□ -1.05
SF3B6-202ENST00000478050 RGL2O15211 777 aa8.5□□□□□ -1.05
SF3B6-202ENST00000478050 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
SF3B6-202ENST00000478050 PTPN5P54829 565 aa8.49□□□□□ -1.05
SF3B6-202ENST00000478050 FOXK1P85037 733 aa8.49□□□□□ -1.05
SF3B6-202ENST00000478050 DCAF8L2P0C7V8 631 aa8.48□□□□□ -1.05
SF3B6-202ENST00000478050 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
SF3B6-202ENST00000478050 ERCC6Q03468 1493 aa8.46□□□□□ -1.05
SF3B6-202ENST00000478050 EIF4G1Q04637 1599 aaKnown RBP8.44□□□□□ -1.06
SF3B6-202ENST00000478050 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
SF3B6-202ENST00000478050 DSG2Q14126 1118 aa8.44□□□□□ -1.06
SF3B6-202ENST00000478050 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
SF3B6-202ENST00000478050 SUPT5HO00267 1087 aaKnown RBP8.43□□□□□ -1.06
SF3B6-202ENST00000478050 PKD2Q13563 968 aa8.43□□□□□ -1.06
SF3B6-202ENST00000478050 RGS20O76081 388 aa8.42□□□□□ -1.06
SF3B6-202ENST00000478050 ZNF454Q8N9F8 522 aa8.41□□□□□ -1.06
SF3B6-202ENST00000478050 MYO15BQ96JP2 1530 aa8.4□□□□□ -1.06
SF3B6-202ENST00000478050 UPF1Q92900 1129 aaKnown RBP eCLIP8.4□□□□□ -1.06
SF3B6-202ENST00000478050 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
SF3B6-202ENST00000478050 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
SF3B6-202ENST00000478050 BCL2L12Q9HB09 334 aa8.38□□□□□ -1.07
SF3B6-202ENST00000478050 PTPREP23469 700 aa8.37□□□□□ -1.07
SF3B6-202ENST00000478050 IFFO2Q5TF58 517 aa8.37□□□□□ -1.07
SF3B6-202ENST00000478050 THSD4Q6ZMP0 1018 aa8.37□□□□□ -1.07
SF3B6-202ENST00000478050 MRPL50Q8N5N7 158 aaKnown RBP8.37□□□□□ -1.07
SF3B6-202ENST00000478050 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
SF3B6-202ENST00000478050 WNT2BQ93097 391 aa8.37□□□□□ -1.07
SF3B6-202ENST00000478050 A0A0G2JS52 829 aa8.34□□□□□ -1.07
SF3B6-202ENST00000478050 HS6ST3Q8IZP7 471 aa8.34□□□□□ -1.07
SF3B6-202ENST00000478050 FOSBP53539 338 aa8.33□□□□□ -1.08
SF3B6-202ENST00000478050 BHMG1C9JSJ3 638 aaPredicted RBP8.32□□□□□ -1.08
SF3B6-202ENST00000478050 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
SF3B6-202ENST00000478050 NBPF3Q9H094 633 aa8.32□□□□□ -1.08
SF3B6-202ENST00000478050 CHGAP10645 457 aaKnown RBP8.3□□□□□ -1.08
SF3B6-202ENST00000478050 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
SF3B6-202ENST00000478050 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
SF3B6-202ENST00000478050 RYDENQ9NUL5 291 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms