RNA–Protein interactions for RNA: ENST00000477240.1

ARPC1A-205, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 2

Gene ARPC1A, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-205ENST00000477240 TTC37Q6PGP7 1564 aa13.65□□□□□ -0.22
ARPC1A-205ENST00000477240 CLIP1P30622 1438 aa13.64□□□□□ -0.23
ARPC1A-205ENST00000477240 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
ARPC1A-205ENST00000477240 FANCAO15360 1455 aa13.64□□□□□ -0.23
ARPC1A-205ENST00000477240 ADGRL1O94910 1474 aa13.64□□□□□ -0.23
ARPC1A-205ENST00000477240 RAPGEF3O95398 923 aa13.64□□□□□ -0.23
ARPC1A-205ENST00000477240 AKNAQ7Z591 1439 aa13.63□□□□□ -0.23
ARPC1A-205ENST00000477240 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
ARPC1A-205ENST00000477240 PLCH2O75038 1416 aa13.62□□□□□ -0.23
ARPC1A-205ENST00000477240 TROQ12816 1431 aaPredicted RBP13.62□□□□□ -0.23
ARPC1A-205ENST00000477240 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
ARPC1A-205ENST00000477240 LRRIQ1Q96JM4 1722 aa13.61□□□□□ -0.23
ARPC1A-205ENST00000477240 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
ARPC1A-205ENST00000477240 KIF14Q15058 1648 aa13.6□□□□□ -0.23
ARPC1A-205ENST00000477240 DENND4BO75064 1496 aaPredicted RBP13.6□□□□□ -0.23
ARPC1A-205ENST00000477240 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
ARPC1A-205ENST00000477240 FRMPD1Q5SYB0 1578 aa13.59□□□□□ -0.23
ARPC1A-205ENST00000477240 RICTORQ6R327 1708 aa13.57□□□□□ -0.24
ARPC1A-205ENST00000477240 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
ARPC1A-205ENST00000477240 EFCAB2Q5VUJ9 269 aa13.57□□□□□ -0.24
ARPC1A-205ENST00000477240 SCAPERQ9BY12 1400 aa13.55□□□□□ -0.24
ARPC1A-205ENST00000477240 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
ARPC1A-205ENST00000477240 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
ARPC1A-205ENST00000477240 ZMYM4Q5VZL5 1548 aa13.53□□□□□ -0.24
ARPC1A-205ENST00000477240 POGZQ7Z3K3 1410 aa13.52□□□□□ -0.25
ARPC1A-205ENST00000477240 MAGI2Q86UL8 1455 aa13.52□□□□□ -0.25
ARPC1A-205ENST00000477240 ARHGEF40Q8TER5 1519 aa13.52□□□□□ -0.25
ARPC1A-205ENST00000477240 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
ARPC1A-205ENST00000477240 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
ARPC1A-205ENST00000477240 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
ARPC1A-205ENST00000477240 PREX2Q70Z35 1606 aa13.49□□□□□ -0.25
ARPC1A-205ENST00000477240 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
ARPC1A-205ENST00000477240 LOC105371045A0A1W2PR82 267 aa13.48□□□□□ -0.25
ARPC1A-205ENST00000477240 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
ARPC1A-205ENST00000477240 ADAMTSL3P82987 1691 aa13.47□□□□□ -0.25
ARPC1A-205ENST00000477240 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
ARPC1A-205ENST00000477240 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
ARPC1A-205ENST00000477240 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
ARPC1A-205ENST00000477240 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
ARPC1A-205ENST00000477240 AFAP1Q8N556 730 aa13.45□□□□□ -0.26
ARPC1A-205ENST00000477240 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
ARPC1A-205ENST00000477240 KDM5CP41229 1560 aa13.45□□□□□ -0.26
ARPC1A-205ENST00000477240 ABCC1P33527 1531 aa13.44□□□□□ -0.26
ARPC1A-205ENST00000477240 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
ARPC1A-205ENST00000477240 ATP10AO60312 1499 aa13.43□□□□□ -0.26
ARPC1A-205ENST00000477240 PTPRMP28827 1452 aa13.43□□□□□ -0.26
ARPC1A-205ENST00000477240 C9orf84Q5VXU9 1444 aa13.42□□□□□ -0.26
ARPC1A-205ENST00000477240 ARHGEF12Q9NZN5 1544 aa13.42□□□□□ -0.26
ARPC1A-205ENST00000477240 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
ARPC1A-205ENST00000477240 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
ARPC1A-205ENST00000477240 ITSN2Q9NZM3 1697 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 TRAPPC8Q9Y2L5 1435 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 EHBP1L1Q8N3D4 1523 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 SIGLEC1Q9BZZ2 1709 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 MLH3Q9UHC1 1453 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
ARPC1A-205ENST00000477240 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
ARPC1A-205ENST00000477240 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
ARPC1A-205ENST00000477240 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
ARPC1A-205ENST00000477240 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
ARPC1A-205ENST00000477240 MLECQ14165 292 aa13.37□□□□□ -0.27
ARPC1A-205ENST00000477240 SYCP2Q9BX26 1530 aa13.37□□□□□ -0.27
ARPC1A-205ENST00000477240 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
ARPC1A-205ENST00000477240 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
ARPC1A-205ENST00000477240 DIP2CQ9Y2E4 1556 aa13.37□□□□□ -0.27
ARPC1A-205ENST00000477240 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
ARPC1A-205ENST00000477240 TIAM1Q13009 1591 aa13.36□□□□□ -0.27
ARPC1A-205ENST00000477240 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
ARPC1A-205ENST00000477240 ABCA6Q8N139 1617 aa13.35□□□□□ -0.27
ARPC1A-205ENST00000477240 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
ARPC1A-205ENST00000477240 FER1L4A9Z1Z3 1794 aa13.34□□□□□ -0.27
ARPC1A-205ENST00000477240 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
ARPC1A-205ENST00000477240 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.27
ARPC1A-205ENST00000477240 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
ARPC1A-205ENST00000477240 CAPN15O75808 1086 aa13.32□□□□□ -0.28
ARPC1A-205ENST00000477240 AGLP35573 1532 aa13.32□□□□□ -0.28
ARPC1A-205ENST00000477240 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
ARPC1A-205ENST00000477240 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
ARPC1A-205ENST00000477240 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
ARPC1A-205ENST00000477240 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
ARPC1A-205ENST00000477240 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
ARPC1A-205ENST00000477240 MBD5Q9P267 1494 aa13.29□□□□□ -0.28
ARPC1A-205ENST00000477240 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
ARPC1A-205ENST00000477240 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
ARPC1A-205ENST00000477240 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.29
ARPC1A-205ENST00000477240 LMTK3Q96Q04 1460 aa13.27□□□□□ -0.29
ARPC1A-205ENST00000477240 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
ARPC1A-205ENST00000477240 RSPH4AQ5TD94 716 aa13.26□□□□□ -0.29
ARPC1A-205ENST00000477240 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
ARPC1A-205ENST00000477240 RTEL1-TNFRSF6BF6WH68 1400 aa13.25□□□□□ -0.29
ARPC1A-205ENST00000477240 APLP2Q06481 763 aa13.25□□□□□ -0.29
ARPC1A-205ENST00000477240 A2MP01023 1474 aa13.24□□□□□ -0.29
ARPC1A-205ENST00000477240 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
ARPC1A-205ENST00000477240 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
ARPC1A-205ENST00000477240 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
ARPC1A-205ENST00000477240 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
ARPC1A-205ENST00000477240 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
ARPC1A-205ENST00000477240 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms