RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 BCORL1Q5H9F3 1711 aa27.75■■■□□ 2.03
SREBF1-211ENST00000476994 MYO5CQ9NQX4 1742 aa27.72■■■□□ 2.03
SREBF1-211ENST00000476994 PTPRMP28827 1452 aa27.69■■■□□ 2.02
SREBF1-211ENST00000476994 PLCH2O75038 1416 aa27.67■■■□□ 2.02
SREBF1-211ENST00000476994 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
SREBF1-211ENST00000476994 KIF14Q15058 1648 aa27.67■■■□□ 2.02
SREBF1-211ENST00000476994 MADDQ8WXG6 1647 aa27.66■■■□□ 2.02
SREBF1-211ENST00000476994 ZFYVE16Q7Z3T8 1539 aa27.66■■■□□ 2.02
SREBF1-211ENST00000476994 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
SREBF1-211ENST00000476994 POGZQ7Z3K3 1410 aa27.65■■■□□ 2.02
SREBF1-211ENST00000476994 MAGI2Q86UL8 1455 aa27.64■■■□□ 2.02
SREBF1-211ENST00000476994 EHBP1L1Q8N3D4 1523 aa27.64■■■□□ 2.02
SREBF1-211ENST00000476994 EFCAB2Q5VUJ9 269 aa27.62■■■□□ 2.01
SREBF1-211ENST00000476994 SCAPERQ9BY12 1400 aa27.61■■■□□ 2.01
SREBF1-211ENST00000476994 RIMS1Q86UR5 1692 aaKnown RBP27.61■■■□□ 2.01
SREBF1-211ENST00000476994 TROQ12816 1431 aaPredicted RBP27.6■■■□□ 2.01
SREBF1-211ENST00000476994 KANK4Q5T7N3 995 aaPredicted RBP27.6■■■□□ 2.01
SREBF1-211ENST00000476994 APLP2Q06481 763 aa27.55■■■□□ 2
SREBF1-211ENST00000476994 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
SREBF1-211ENST00000476994 ARHGAP5Q13017 1502 aa27.55■■■□□ 2
SREBF1-211ENST00000476994 SUPT6HQ7KZ85 1726 aaKnown RBP27.54■■■□□ 2
SREBF1-211ENST00000476994 YEATS2Q9ULM3 1422 aa27.53■■■□□ 2
SREBF1-211ENST00000476994 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
SREBF1-211ENST00000476994 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
SREBF1-211ENST00000476994 ZNF518AQ6AHZ1 1483 aa27.49■■□□□ 1.99
SREBF1-211ENST00000476994 ATP10AO60312 1499 aa27.47■■□□□ 1.99
SREBF1-211ENST00000476994 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
SREBF1-211ENST00000476994 MLECQ14165 292 aa27.46■■□□□ 1.99
SREBF1-211ENST00000476994 MYT1LQ9UL68 1186 aa27.46■■□□□ 1.99
SREBF1-211ENST00000476994 SIGLEC1Q9BZZ2 1709 aa27.46■■□□□ 1.99
SREBF1-211ENST00000476994 NCOA2Q15596 1464 aa27.45■■□□□ 1.99
SREBF1-211ENST00000476994 C9orf84Q5VXU9 1444 aa27.45■■□□□ 1.98
SREBF1-211ENST00000476994 PLPPR3Q6T4P5 718 aa27.44■■□□□ 1.98
SREBF1-211ENST00000476994 CDC42BPAQ5VT25 1732 aa27.44■■□□□ 1.98
SREBF1-211ENST00000476994 PREX2Q70Z35 1606 aa27.43■■□□□ 1.98
SREBF1-211ENST00000476994 PPARGC1BQ86YN6 1023 aaKnown RBP27.4■■□□□ 1.98
SREBF1-211ENST00000476994 KDM5CP41229 1560 aa27.39■■□□□ 1.98
SREBF1-211ENST00000476994 LMTK3Q96Q04 1460 aa27.39■■□□□ 1.98
SREBF1-211ENST00000476994 AFAP1Q8N556 730 aa27.36■■□□□ 1.97
SREBF1-211ENST00000476994 ITSN2Q9NZM3 1697 aa27.36■■□□□ 1.97
SREBF1-211ENST00000476994 ARHGEF12Q9NZN5 1544 aa27.33■■□□□ 1.97
SREBF1-211ENST00000476994 ABCC1P33527 1531 aa27.32■■□□□ 1.96
SREBF1-211ENST00000476994 GPATCH8Q9UKJ3 1502 aaKnown RBP27.32■■□□□ 1.96
SREBF1-211ENST00000476994 DIP2CQ9Y2E4 1556 aa27.31■■□□□ 1.96
SREBF1-211ENST00000476994 MLH3Q9UHC1 1453 aa27.3■■□□□ 1.96
SREBF1-211ENST00000476994 REREQ9P2R6 1566 aa27.29■■□□□ 1.96
SREBF1-211ENST00000476994 MYOM3Q5VTT5 1437 aa27.28■■□□□ 1.96
SREBF1-211ENST00000476994 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
SREBF1-211ENST00000476994 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
SREBF1-211ENST00000476994 CCNB3Q8WWL7 1395 aa27.25■■□□□ 1.95
SREBF1-211ENST00000476994 HSPA2P54652 639 aa27.24■■□□□ 1.95
SREBF1-211ENST00000476994 ESF1Q9H501 851 aaKnown RBP27.24■■□□□ 1.95
SREBF1-211ENST00000476994 SETD1BQ9UPS6 1966 aaKnown RBP27.24■■□□□ 1.95
SREBF1-211ENST00000476994 ZNF777Q9ULD5 760 aaPredicted RBP27.23■■□□□ 1.95
SREBF1-211ENST00000476994 TRAPPC8Q9Y2L5 1435 aa27.23■■□□□ 1.95
SREBF1-211ENST00000476994 FBXO41Q8TF61 875 aa27.22■■□□□ 1.95
SREBF1-211ENST00000476994 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.95
SREBF1-211ENST00000476994 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.94
SREBF1-211ENST00000476994 MIA2Q96PC5 1412 aa27.19■■□□□ 1.94
SREBF1-211ENST00000476994 AGLP35573 1532 aa27.18■■□□□ 1.94
SREBF1-211ENST00000476994 PTPN23Q9H3S7 1636 aa27.18■■□□□ 1.94
SREBF1-211ENST00000476994 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
SREBF1-211ENST00000476994 RRBP1Q9P2E9 1410 aaKnown RBP27.17■■□□□ 1.94
SREBF1-211ENST00000476994 PLEKHH2Q8IVE3 1493 aa27.16■■□□□ 1.94
SREBF1-211ENST00000476994 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
SREBF1-211ENST00000476994 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
SREBF1-211ENST00000476994 CEBPAP49715 358 aaPredicted RBP27.15■■□□□ 1.94
SREBF1-211ENST00000476994 CFDP1Q9UEE9 299 aaPredicted RBP27.15■■□□□ 1.94
SREBF1-211ENST00000476994 C3P01024 1663 aa27.13■■□□□ 1.93
SREBF1-211ENST00000476994 UHRF1BP1Q6BDS2 1440 aa27.12■■□□□ 1.93
SREBF1-211ENST00000476994 SPAG9O60271 1321 aaKnown RBP27.12■■□□□ 1.93
SREBF1-211ENST00000476994 CAMSAP2Q08AD1 1489 aa27.11■■□□□ 1.93
SREBF1-211ENST00000476994 CNTLNQ9NXG0 1405 aa27.08■■□□□ 1.93
SREBF1-211ENST00000476994 KIAA1107Q9UPP5 1409 aa27.08■■□□□ 1.93
SREBF1-211ENST00000476994 HNRNPMP52272 730 aaKnown RBP eCLIP27.08■■□□□ 1.93
SREBF1-211ENST00000476994 ATP7AQ04656 1500 aa27.06■■□□□ 1.92
SREBF1-211ENST00000476994 DMRT2Q9Y5R5 561 aa27.05■■□□□ 1.92
SREBF1-211ENST00000476994 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
SREBF1-211ENST00000476994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
SREBF1-211ENST00000476994 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
SREBF1-211ENST00000476994 INO80Q9ULG1 1556 aaPredicted RBP27.02■■□□□ 1.92
SREBF1-211ENST00000476994 ARHGEF5Q12774 1597 aa27.01■■□□□ 1.92
SREBF1-211ENST00000476994 CROCC2H7BZ55 1655 aa27.01■■□□□ 1.91
SREBF1-211ENST00000476994 DNMT1P26358 1616 aaKnown RBP27.01■■□□□ 1.91
SREBF1-211ENST00000476994 MBD5Q9P267 1494 aa27■■□□□ 1.91
SREBF1-211ENST00000476994 ADGBQ8N7X0 1667 aa27■■□□□ 1.91
SREBF1-211ENST00000476994 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
SREBF1-211ENST00000476994 A2MP01023 1474 aa26.97■■□□□ 1.91
SREBF1-211ENST00000476994 CERKQ8TCT0 537 aa26.95■■□□□ 1.9
SREBF1-211ENST00000476994 PLXNC1O60486 1568 aa26.94■■□□□ 1.9
SREBF1-211ENST00000476994 CLTCQ00610 1675 aaKnown RBP26.94■■□□□ 1.9
SREBF1-211ENST00000476994 NPATQ14207 1427 aa26.91■■□□□ 1.9
SREBF1-211ENST00000476994 ABCC5O15440 1437 aa26.9■■□□□ 1.9
SREBF1-211ENST00000476994 ZMYM3Q14202 1370 aa26.9■■□□□ 1.9
SREBF1-211ENST00000476994 FAM50AQ14320 339 aaKnown RBP26.9■■□□□ 1.9
SREBF1-211ENST00000476994 DAPK1P53355 1430 aa26.9■■□□□ 1.9
SREBF1-211ENST00000476994 CCDC141Q6ZP82 1450 aa26.89■■□□□ 1.9
SREBF1-211ENST00000476994 GGT6Q6P531 493 aa26.88■■□□□ 1.89
SREBF1-211ENST00000476994 PTPRKQ15262 1439 aa26.88■■□□□ 1.89
SREBF1-211ENST00000476994 MAST1Q9Y2H9 1570 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms