RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 ATP10BO94823 1461 aa18.69■□□□□ 0.58
CDKAL1-203ENST00000476517 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
CDKAL1-203ENST00000476517 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
CDKAL1-203ENST00000476517 HRCP23327 699 aa18.66■□□□□ 0.58
CDKAL1-203ENST00000476517 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CDKAL1-203ENST00000476517 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
CDKAL1-203ENST00000476517 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
CDKAL1-203ENST00000476517 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
CDKAL1-203ENST00000476517 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
CDKAL1-203ENST00000476517 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
CDKAL1-203ENST00000476517 KDM5BQ9UGL1 1544 aa18.6■□□□□ 0.57
CDKAL1-203ENST00000476517 PLEKHD1A6NEE1 506 aa18.6■□□□□ 0.57
CDKAL1-203ENST00000476517 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
CDKAL1-203ENST00000476517 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDKAL1-203ENST00000476517 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
CDKAL1-203ENST00000476517 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.56
CDKAL1-203ENST00000476517 PREX2Q70Z35 1606 aa18.58■□□□□ 0.56
CDKAL1-203ENST00000476517 TSPOAP1O95153 1857 aa18.58■□□□□ 0.56
CDKAL1-203ENST00000476517 DNMT1P26358 1616 aaKnown RBP18.56■□□□□ 0.56
CDKAL1-203ENST00000476517 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
CDKAL1-203ENST00000476517 GCC2Q8IWJ2 1684 aa18.56■□□□□ 0.56
CDKAL1-203ENST00000476517 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
CDKAL1-203ENST00000476517 ITGAEP38570 1179 aa18.53■□□□□ 0.56
CDKAL1-203ENST00000476517 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
CDKAL1-203ENST00000476517 CDC42BPBQ9Y5S2 1711 aa18.53■□□□□ 0.56
CDKAL1-203ENST00000476517 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
CDKAL1-203ENST00000476517 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
CDKAL1-203ENST00000476517 CAMSAP2Q08AD1 1489 aa18.51■□□□□ 0.55
CDKAL1-203ENST00000476517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDKAL1-203ENST00000476517 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
CDKAL1-203ENST00000476517 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
CDKAL1-203ENST00000476517 PPRC1Q5VV67 1664 aaKnown RBP18.45■□□□□ 0.54
CDKAL1-203ENST00000476517 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
CDKAL1-203ENST00000476517 DAPK1P53355 1430 aa18.44■□□□□ 0.54
CDKAL1-203ENST00000476517 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
CDKAL1-203ENST00000476517 HFM1A2PYH4 1435 aa18.43■□□□□ 0.54
CDKAL1-203ENST00000476517 ARHGAP5Q13017 1502 aa18.43■□□□□ 0.54
CDKAL1-203ENST00000476517 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
CDKAL1-203ENST00000476517 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
CDKAL1-203ENST00000476517 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
CDKAL1-203ENST00000476517 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
CDKAL1-203ENST00000476517 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
CDKAL1-203ENST00000476517 GLI2P10070 1586 aa18.4■□□□□ 0.54
CDKAL1-203ENST00000476517 PTPRKQ15262 1439 aa18.4■□□□□ 0.54
CDKAL1-203ENST00000476517 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
CDKAL1-203ENST00000476517 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
CDKAL1-203ENST00000476517 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
CDKAL1-203ENST00000476517 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
CDKAL1-203ENST00000476517 ABCC5O15440 1437 aa18.37■□□□□ 0.53
CDKAL1-203ENST00000476517 DHX57Q6P158 1386 aaKnown RBP18.36■□□□□ 0.53
CDKAL1-203ENST00000476517 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
CDKAL1-203ENST00000476517 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
CDKAL1-203ENST00000476517 NAIPQ13075 1403 aa18.35■□□□□ 0.53
CDKAL1-203ENST00000476517 ASXL2Q76L83 1435 aa18.35■□□□□ 0.53
CDKAL1-203ENST00000476517 CFAP74Q9C0B2 1584 aa18.34■□□□□ 0.53
CDKAL1-203ENST00000476517 ADGRL2O95490 1459 aa18.33■□□□□ 0.53
CDKAL1-203ENST00000476517 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
CDKAL1-203ENST00000476517 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.52
CDKAL1-203ENST00000476517 MAST1Q9Y2H9 1570 aa18.32■□□□□ 0.52
CDKAL1-203ENST00000476517 SYCP2Q9BX26 1530 aa18.32■□□□□ 0.52
CDKAL1-203ENST00000476517 PLCH2O75038 1416 aa18.32■□□□□ 0.52
CDKAL1-203ENST00000476517 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
CDKAL1-203ENST00000476517 ABCC1P33527 1531 aa18.31■□□□□ 0.52
CDKAL1-203ENST00000476517 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
CDKAL1-203ENST00000476517 KCNH8Q96L42 1107 aa18.29■□□□□ 0.52
CDKAL1-203ENST00000476517 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
CDKAL1-203ENST00000476517 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
CDKAL1-203ENST00000476517 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
CDKAL1-203ENST00000476517 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
CDKAL1-203ENST00000476517 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
CDKAL1-203ENST00000476517 RSPH4AQ5TD94 716 aa18.25■□□□□ 0.51
CDKAL1-203ENST00000476517 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
CDKAL1-203ENST00000476517 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
CDKAL1-203ENST00000476517 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
CDKAL1-203ENST00000476517 SOCS7O14512 581 aa18.24■□□□□ 0.51
CDKAL1-203ENST00000476517 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
CDKAL1-203ENST00000476517 RRP7BPQ9NSQ0 103 aa18.23■□□□□ 0.51
CDKAL1-203ENST00000476517 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
CDKAL1-203ENST00000476517 FANCAO15360 1455 aa18.22■□□□□ 0.51
CDKAL1-203ENST00000476517 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
CDKAL1-203ENST00000476517 TSPY4P0CV99 314 aa18.2■□□□□ 0.5
CDKAL1-203ENST00000476517 TSPY10P0CW01 314 aa18.2■□□□□ 0.5
CDKAL1-203ENST00000476517 HNRNPMP52272 730 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDKAL1-203ENST00000476517 ILDR2Q71H61 639 aa18.16■□□□□ 0.5
CDKAL1-203ENST00000476517 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
CDKAL1-203ENST00000476517 ARHGEF12Q9NZN5 1544 aa18.14■□□□□ 0.49
CDKAL1-203ENST00000476517 ANKRD50Q9ULJ7 1429 aa18.14■□□□□ 0.49
CDKAL1-203ENST00000476517 KIF15Q9NS87 1388 aa18.13■□□□□ 0.49
CDKAL1-203ENST00000476517 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
CDKAL1-203ENST00000476517 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
CDKAL1-203ENST00000476517 DUOX2Q9NRD8 1548 aa18.12■□□□□ 0.49
CDKAL1-203ENST00000476517 UNC13BO14795 1591 aa18.12■□□□□ 0.49
CDKAL1-203ENST00000476517 KDM5DQ9BY66 1539 aa18.11■□□□□ 0.49
CDKAL1-203ENST00000476517 ATP7AQ04656 1500 aa18.1■□□□□ 0.49
CDKAL1-203ENST00000476517 NEO1Q92859 1461 aa18.09■□□□□ 0.49
CDKAL1-203ENST00000476517 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
CDKAL1-203ENST00000476517 RTEL1-TNFRSF6BF6WH68 1400 aa18.08■□□□□ 0.49
CDKAL1-203ENST00000476517 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
CDKAL1-203ENST00000476517 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
CDKAL1-203ENST00000476517 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms