RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
TMEM254-211ENST00000476173 NCOA2Q15596 1464 aa15.2■□□□□ 0.02
TMEM254-211ENST00000476173 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
TMEM254-211ENST00000476173 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
TMEM254-211ENST00000476173 MAP3K4Q9Y6R4 1608 aa15.17■□□□□ 0.02
TMEM254-211ENST00000476173 CD109Q6YHK3 1445 aa15.17■□□□□ 0.02
TMEM254-211ENST00000476173 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
TMEM254-211ENST00000476173 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
TMEM254-211ENST00000476173 PLCH2O75038 1416 aa15.14■□□□□ 0.01
TMEM254-211ENST00000476173 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
TMEM254-211ENST00000476173 CDC42BPAQ5VT25 1732 aa15.13■□□□□ 0.01
TMEM254-211ENST00000476173 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
TMEM254-211ENST00000476173 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
TMEM254-211ENST00000476173 CDC42BPBQ9Y5S2 1711 aa15.11■□□□□ 0.01
TMEM254-211ENST00000476173 ARAP3Q8WWN8 1544 aa15.11■□□□□ 0.01
TMEM254-211ENST00000476173 PREX2Q70Z35 1606 aa15.1■□□□□ 0.01
TMEM254-211ENST00000476173 MYOM3Q5VTT5 1437 aa15.1■□□□□ 0.01
TMEM254-211ENST00000476173 TSPOAP1O95153 1857 aa15.1■□□□□ 0.01
TMEM254-211ENST00000476173 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
TMEM254-211ENST00000476173 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
TMEM254-211ENST00000476173 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
TMEM254-211ENST00000476173 ARHGAP5Q13017 1502 aa15.08■□□□□ 0.01
TMEM254-211ENST00000476173 EFCAB2Q5VUJ9 269 aa15.08■□□□□ 0
TMEM254-211ENST00000476173 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
TMEM254-211ENST00000476173 FANCAO15360 1455 aa15.08■□□□□ 0
TMEM254-211ENST00000476173 MIA2Q96PC5 1412 aa15.07■□□□□ 0
TMEM254-211ENST00000476173 TEX14Q8IWB6 1497 aa15.07■□□□□ 0
TMEM254-211ENST00000476173 FGD6Q6ZV73 1430 aa15.06■□□□□ 0
TMEM254-211ENST00000476173 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
TMEM254-211ENST00000476173 NEO1Q92859 1461 aa15.04■□□□□ -0
TMEM254-211ENST00000476173 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
TMEM254-211ENST00000476173 AKNAQ7Z591 1439 aa15.03■□□□□ -0
TMEM254-211ENST00000476173 SAMD9LQ8IVG5 1584 aa15.02■□□□□ -0
TMEM254-211ENST00000476173 CFAP74Q9C0B2 1584 aa15.02□□□□□ -0.01
TMEM254-211ENST00000476173 PTPN23Q9H3S7 1636 aa15.01□□□□□ -0.01
TMEM254-211ENST00000476173 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
TMEM254-211ENST00000476173 CAMSAP2Q08AD1 1489 aa15□□□□□ -0.01
TMEM254-211ENST00000476173 TCOF1Q13428 1488 aaKnown RBP15□□□□□ -0.01
TMEM254-211ENST00000476173 KIAA1107Q9UPP5 1409 aa15□□□□□ -0.01
TMEM254-211ENST00000476173 ABCC1P33527 1531 aa14.99□□□□□ -0.01
TMEM254-211ENST00000476173 ARHGEF12Q9NZN5 1544 aa14.99□□□□□ -0.01
TMEM254-211ENST00000476173 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
TMEM254-211ENST00000476173 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
TMEM254-211ENST00000476173 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
TMEM254-211ENST00000476173 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
TMEM254-211ENST00000476173 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
TMEM254-211ENST00000476173 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
TMEM254-211ENST00000476173 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
TMEM254-211ENST00000476173 MBD5Q9P267 1494 aa14.96□□□□□ -0.01
TMEM254-211ENST00000476173 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
TMEM254-211ENST00000476173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.96□□□□□ -0.02
TMEM254-211ENST00000476173 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
TMEM254-211ENST00000476173 TRAPPC8Q9Y2L5 1435 aa14.94□□□□□ -0.02
TMEM254-211ENST00000476173 RAPGEF3O95398 923 aa14.93□□□□□ -0.02
TMEM254-211ENST00000476173 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
TMEM254-211ENST00000476173 AFAP1Q8N556 730 aa14.93□□□□□ -0.02
TMEM254-211ENST00000476173 ARHGEF5Q12774 1597 aa14.93□□□□□ -0.02
TMEM254-211ENST00000476173 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
TMEM254-211ENST00000476173 ABCC5O15440 1437 aa14.92□□□□□ -0.02
TMEM254-211ENST00000476173 RICTORQ6R327 1708 aa14.91□□□□□ -0.02
TMEM254-211ENST00000476173 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
TMEM254-211ENST00000476173 ZNF518AQ6AHZ1 1483 aa14.9□□□□□ -0.02
TMEM254-211ENST00000476173 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
TMEM254-211ENST00000476173 KDM6BO15054 1643 aa14.9□□□□□ -0.02
TMEM254-211ENST00000476173 DNMT1P26358 1616 aaKnown RBP14.89□□□□□ -0.03
TMEM254-211ENST00000476173 DAPK1P53355 1430 aa14.89□□□□□ -0.03
TMEM254-211ENST00000476173 KDM5CP41229 1560 aa14.88□□□□□ -0.03
TMEM254-211ENST00000476173 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
TMEM254-211ENST00000476173 TSPY4P0CV99 314 aa14.87□□□□□ -0.03
TMEM254-211ENST00000476173 TSPY10P0CW01 314 aa14.87□□□□□ -0.03
TMEM254-211ENST00000476173 ITGAEP38570 1179 aa14.87□□□□□ -0.03
TMEM254-211ENST00000476173 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
TMEM254-211ENST00000476173 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
TMEM254-211ENST00000476173 CROCC2H7BZ55 1655 aa14.85□□□□□ -0.03
TMEM254-211ENST00000476173 MLH3Q9UHC1 1453 aa14.85□□□□□ -0.03
TMEM254-211ENST00000476173 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
TMEM254-211ENST00000476173 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
TMEM254-211ENST00000476173 C9orf84Q5VXU9 1444 aa14.84□□□□□ -0.03
TMEM254-211ENST00000476173 MAST1Q9Y2H9 1570 aa14.84□□□□□ -0.03
TMEM254-211ENST00000476173 RTEL1-TNFRSF6BF6WH68 1400 aa14.83□□□□□ -0.03
TMEM254-211ENST00000476173 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
TMEM254-211ENST00000476173 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
TMEM254-211ENST00000476173 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
TMEM254-211ENST00000476173 HECW2Q9P2P5 1572 aa14.82□□□□□ -0.04
TMEM254-211ENST00000476173 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
TMEM254-211ENST00000476173 KIDINS220Q9ULH0 1771 aa14.82□□□□□ -0.04
TMEM254-211ENST00000476173 ATP7AQ04656 1500 aa14.82□□□□□ -0.04
TMEM254-211ENST00000476173 MYT1LQ9UL68 1186 aa14.81□□□□□ -0.04
TMEM254-211ENST00000476173 YEATS2Q9ULM3 1422 aa14.81□□□□□ -0.04
TMEM254-211ENST00000476173 ROCK1Q13464 1354 aa14.8□□□□□ -0.04
TMEM254-211ENST00000476173 NCOA1Q15788 1441 aa14.8□□□□□ -0.04
TMEM254-211ENST00000476173 ADGRL2O95490 1459 aa14.8□□□□□ -0.04
TMEM254-211ENST00000476173 ANKRD30AQ9BXX3 1397 aa14.79□□□□□ -0.04
TMEM254-211ENST00000476173 RRP7BPQ9NSQ0 103 aa14.78□□□□□ -0.04
TMEM254-211ENST00000476173 ADGBQ8N7X0 1667 aa14.77□□□□□ -0.04
TMEM254-211ENST00000476173 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
TMEM254-211ENST00000476173 PLXNC1O60486 1568 aa14.77□□□□□ -0.04
TMEM254-211ENST00000476173 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.05
TMEM254-211ENST00000476173 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
TMEM254-211ENST00000476173 ATP10AO60312 1499 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms