RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 CEP162Q5TB80 1403 aa15.07■□□□□ 0
SEMA3C-208ENST00000475955 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
SEMA3C-208ENST00000475955 ZMYM4Q5VZL5 1548 aa15.06■□□□□ 0
SEMA3C-208ENST00000475955 ARHGEF40Q8TER5 1519 aa15.06■□□□□ 0
SEMA3C-208ENST00000475955 PREX2Q70Z35 1606 aa15.05■□□□□ -0
SEMA3C-208ENST00000475955 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
SEMA3C-208ENST00000475955 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
SEMA3C-208ENST00000475955 BCORL1Q5H9F3 1711 aa15.03■□□□□ -0
SEMA3C-208ENST00000475955 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
SEMA3C-208ENST00000475955 POGZQ7Z3K3 1410 aa15.02■□□□□ -0
SEMA3C-208ENST00000475955 YEATS2Q9ULM3 1422 aa15.02■□□□□ -0
SEMA3C-208ENST00000475955 EFCAB2Q5VUJ9 269 aa15.02■□□□□ -0
SEMA3C-208ENST00000475955 TRIM26Q12899 539 aaPredicted RBP15□□□□□ -0.01
SEMA3C-208ENST00000475955 ZFYVE16Q7Z3T8 1539 aa15□□□□□ -0.01
SEMA3C-208ENST00000475955 ARHGEF12Q9NZN5 1544 aa14.99□□□□□ -0.01
SEMA3C-208ENST00000475955 ITSN2Q9NZM3 1697 aa14.98□□□□□ -0.01
SEMA3C-208ENST00000475955 KDM5CP41229 1560 aa14.98□□□□□ -0.01
SEMA3C-208ENST00000475955 ABCC1P33527 1531 aa14.97□□□□□ -0.01
SEMA3C-208ENST00000475955 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
SEMA3C-208ENST00000475955 MADDQ8WXG6 1647 aa14.97□□□□□ -0.01
SEMA3C-208ENST00000475955 GPATCH8Q9UKJ3 1502 aaKnown RBP14.96□□□□□ -0.02
SEMA3C-208ENST00000475955 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
SEMA3C-208ENST00000475955 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
SEMA3C-208ENST00000475955 TRAPPC8Q9Y2L5 1435 aa14.94□□□□□ -0.02
SEMA3C-208ENST00000475955 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
SEMA3C-208ENST00000475955 ZNF518AQ6AHZ1 1483 aa14.94□□□□□ -0.02
SEMA3C-208ENST00000475955 RIMS1Q86UR5 1692 aaKnown RBP14.93□□□□□ -0.02
SEMA3C-208ENST00000475955 PTPRMP28827 1452 aa14.93□□□□□ -0.02
SEMA3C-208ENST00000475955 HECW2Q9P2P5 1572 aa14.93□□□□□ -0.02
SEMA3C-208ENST00000475955 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
SEMA3C-208ENST00000475955 ATP10AO60312 1499 aa14.92□□□□□ -0.02
SEMA3C-208ENST00000475955 KIDINS220Q9ULH0 1771 aa14.92□□□□□ -0.02
SEMA3C-208ENST00000475955 ABCA6Q8N139 1617 aa14.92□□□□□ -0.02
SEMA3C-208ENST00000475955 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
SEMA3C-208ENST00000475955 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
SEMA3C-208ENST00000475955 MTUS2Q5JR59 1369 aa14.91□□□□□ -0.02
SEMA3C-208ENST00000475955 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
SEMA3C-208ENST00000475955 FER1L4A9Z1Z3 1794 aa14.89□□□□□ -0.03
SEMA3C-208ENST00000475955 SYCP2Q9BX26 1530 aa14.89□□□□□ -0.03
SEMA3C-208ENST00000475955 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
SEMA3C-208ENST00000475955 MLH3Q9UHC1 1453 aa14.89□□□□□ -0.03
SEMA3C-208ENST00000475955 ZNF777Q9ULD5 760 aaPredicted RBP14.88□□□□□ -0.03
SEMA3C-208ENST00000475955 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
SEMA3C-208ENST00000475955 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
SEMA3C-208ENST00000475955 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
SEMA3C-208ENST00000475955 REREQ9P2R6 1566 aa14.85□□□□□ -0.03
SEMA3C-208ENST00000475955 HNRNPMP52272 730 aaKnown RBP eCLIP14.85□□□□□ -0.03
SEMA3C-208ENST00000475955 MLECQ14165 292 aa14.85□□□□□ -0.03
SEMA3C-208ENST00000475955 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
SEMA3C-208ENST00000475955 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
SEMA3C-208ENST00000475955 NCOA2Q15596 1464 aa14.83□□□□□ -0.03
SEMA3C-208ENST00000475955 KIAA1107Q9UPP5 1409 aa14.83□□□□□ -0.04
SEMA3C-208ENST00000475955 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
SEMA3C-208ENST00000475955 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
SEMA3C-208ENST00000475955 MYT1LQ9UL68 1186 aa14.81□□□□□ -0.04
SEMA3C-208ENST00000475955 PLEKHH2Q8IVE3 1493 aa14.81□□□□□ -0.04
SEMA3C-208ENST00000475955 MBD5Q9P267 1494 aa14.81□□□□□ -0.04
SEMA3C-208ENST00000475955 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
SEMA3C-208ENST00000475955 AGLP35573 1532 aa14.8□□□□□ -0.04
SEMA3C-208ENST00000475955 ATP7AQ04656 1500 aa14.8□□□□□ -0.04
SEMA3C-208ENST00000475955 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
SEMA3C-208ENST00000475955 LMTK3Q96Q04 1460 aa14.77□□□□□ -0.04
SEMA3C-208ENST00000475955 SPAG9O60271 1321 aaKnown RBP14.77□□□□□ -0.04
SEMA3C-208ENST00000475955 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
SEMA3C-208ENST00000475955 C3P01024 1663 aa14.76□□□□□ -0.05
SEMA3C-208ENST00000475955 PLXNC1O60486 1568 aa14.76□□□□□ -0.05
SEMA3C-208ENST00000475955 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
SEMA3C-208ENST00000475955 ADGBQ8N7X0 1667 aa14.75□□□□□ -0.05
SEMA3C-208ENST00000475955 CEBPAP49715 358 aaPredicted RBP14.74□□□□□ -0.05
SEMA3C-208ENST00000475955 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
SEMA3C-208ENST00000475955 PREX1Q8TCU6 1659 aa14.71□□□□□ -0.05
SEMA3C-208ENST00000475955 A2MP01023 1474 aa14.71□□□□□ -0.05
SEMA3C-208ENST00000475955 ARHGEF5Q12774 1597 aa14.71□□□□□ -0.05
SEMA3C-208ENST00000475955 CCDC141Q6ZP82 1450 aa14.7□□□□□ -0.06
SEMA3C-208ENST00000475955 RTEL1-TNFRSF6BF6WH68 1400 aa14.69□□□□□ -0.06
SEMA3C-208ENST00000475955 CLTCQ00610 1675 aaKnown RBP14.69□□□□□ -0.06
SEMA3C-208ENST00000475955 MROH2AA6NES4 1674 aa14.68□□□□□ -0.06
SEMA3C-208ENST00000475955 HSPA2P54652 639 aa14.68□□□□□ -0.06
SEMA3C-208ENST00000475955 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
SEMA3C-208ENST00000475955 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
SEMA3C-208ENST00000475955 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
SEMA3C-208ENST00000475955 MAST1Q9Y2H9 1570 aa14.64□□□□□ -0.07
SEMA3C-208ENST00000475955 DHX29Q7Z478 1369 aaKnown RBP14.63□□□□□ -0.07
SEMA3C-208ENST00000475955 STRCQ7RTU9 1775 aa14.63□□□□□ -0.07
SEMA3C-208ENST00000475955 RSPH4AQ5TD94 716 aa14.63□□□□□ -0.07
SEMA3C-208ENST00000475955 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
SEMA3C-208ENST00000475955 PTPN23Q9H3S7 1636 aa14.63□□□□□ -0.07
SEMA3C-208ENST00000475955 CROCC2H7BZ55 1655 aa14.61□□□□□ -0.07
SEMA3C-208ENST00000475955 ZMYM3Q14202 1370 aa14.61□□□□□ -0.07
SEMA3C-208ENST00000475955 GGT6Q6P531 493 aa14.61□□□□□ -0.07
SEMA3C-208ENST00000475955 APLP2Q06481 763 aa14.6□□□□□ -0.07
SEMA3C-208ENST00000475955 ESF1Q9H501 851 aaKnown RBP14.6□□□□□ -0.07
SEMA3C-208ENST00000475955 UHRF1BP1Q6BDS2 1440 aa14.58□□□□□ -0.07
SEMA3C-208ENST00000475955 TSPY4P0CV99 314 aa14.58□□□□□ -0.08
SEMA3C-208ENST00000475955 TSPY10P0CW01 314 aa14.58□□□□□ -0.08
SEMA3C-208ENST00000475955 ABCC5O15440 1437 aa14.58□□□□□ -0.08
SEMA3C-208ENST00000475955 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.08
SEMA3C-208ENST00000475955 TCOF1Q13428 1488 aaKnown RBP14.57□□□□□ -0.08
SEMA3C-208ENST00000475955 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
SEMA3C-208ENST00000475955 KIF3BO15066 747 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms