RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 AKNAQ7Z591 1439 aa11.98□□□□□ -0.49
UBE4B-208ENST00000475795 HECW1Q76N89 1606 aa11.97□□□□□ -0.49
UBE4B-208ENST00000475795 DENND4BO75064 1496 aaPredicted RBP11.97□□□□□ -0.49
UBE4B-208ENST00000475795 PTPRMP28827 1452 aa11.97□□□□□ -0.49
UBE4B-208ENST00000475795 MADDQ8WXG6 1647 aa11.96□□□□□ -0.5
UBE4B-208ENST00000475795 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.5
UBE4B-208ENST00000475795 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
UBE4B-208ENST00000475795 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
UBE4B-208ENST00000475795 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
UBE4B-208ENST00000475795 MYO5CQ9NQX4 1742 aa11.94□□□□□ -0.5
UBE4B-208ENST00000475795 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
UBE4B-208ENST00000475795 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
UBE4B-208ENST00000475795 ARID4BQ4LE39 1312 aaPredicted RBP11.92□□□□□ -0.5
UBE4B-208ENST00000475795 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
UBE4B-208ENST00000475795 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
UBE4B-208ENST00000475795 SIGLEC1Q9BZZ2 1709 aa11.92□□□□□ -0.5
UBE4B-208ENST00000475795 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
UBE4B-208ENST00000475795 PLCH2O75038 1416 aa11.92□□□□□ -0.5
UBE4B-208ENST00000475795 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
UBE4B-208ENST00000475795 KIF14Q15058 1648 aa11.91□□□□□ -0.5
UBE4B-208ENST00000475795 POGZQ7Z3K3 1410 aa11.9□□□□□ -0.5
UBE4B-208ENST00000475795 PCF11O94913 1555 aaKnown RBP11.89□□□□□ -0.51
UBE4B-208ENST00000475795 YEATS2Q9ULM3 1422 aa11.89□□□□□ -0.51
UBE4B-208ENST00000475795 SCAPERQ9BY12 1400 aa11.88□□□□□ -0.51
UBE4B-208ENST00000475795 FER1L4A9Z1Z3 1794 aa11.88□□□□□ -0.51
UBE4B-208ENST00000475795 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-208ENST00000475795 CDK11AQ9UQ88 783 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-208ENST00000475795 TROQ12816 1431 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-208ENST00000475795 LMTK3Q96Q04 1460 aa11.87□□□□□ -0.51
UBE4B-208ENST00000475795 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
UBE4B-208ENST00000475795 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
UBE4B-208ENST00000475795 CLIP1P30622 1438 aa11.86□□□□□ -0.51
UBE4B-208ENST00000475795 EFCAB2Q5VUJ9 269 aa11.85□□□□□ -0.51
UBE4B-208ENST00000475795 ARHGAP5Q13017 1502 aa11.85□□□□□ -0.51
UBE4B-208ENST00000475795 KDM5CP41229 1560 aa11.84□□□□□ -0.51
UBE4B-208ENST00000475795 ATP10AO60312 1499 aa11.83□□□□□ -0.52
UBE4B-208ENST00000475795 ZNF518AQ6AHZ1 1483 aa11.83□□□□□ -0.52
UBE4B-208ENST00000475795 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
UBE4B-208ENST00000475795 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
UBE4B-208ENST00000475795 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
UBE4B-208ENST00000475795 ARHGEF12Q9NZN5 1544 aa11.82□□□□□ -0.52
UBE4B-208ENST00000475795 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
UBE4B-208ENST00000475795 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
UBE4B-208ENST00000475795 ITSN2Q9NZM3 1697 aa11.8□□□□□ -0.52
UBE4B-208ENST00000475795 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
UBE4B-208ENST00000475795 MLECQ14165 292 aa11.79□□□□□ -0.52
UBE4B-208ENST00000475795 ABCC1P33527 1531 aa11.79□□□□□ -0.52
UBE4B-208ENST00000475795 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
UBE4B-208ENST00000475795 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
UBE4B-208ENST00000475795 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
UBE4B-208ENST00000475795 FYCO1Q9BQS8 1478 aa11.78□□□□□ -0.52
UBE4B-208ENST00000475795 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
UBE4B-208ENST00000475795 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.53
UBE4B-208ENST00000475795 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
UBE4B-208ENST00000475795 FBXO41Q8TF61 875 aa11.76□□□□□ -0.53
UBE4B-208ENST00000475795 HSPA2P54652 639 aa11.75□□□□□ -0.53
UBE4B-208ENST00000475795 TRAPPC8Q9Y2L5 1435 aa11.75□□□□□ -0.53
UBE4B-208ENST00000475795 KIDINS220Q9ULH0 1771 aa11.74□□□□□ -0.53
UBE4B-208ENST00000475795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBE4B-208ENST00000475795 AGLP35573 1532 aa11.73□□□□□ -0.53
UBE4B-208ENST00000475795 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
UBE4B-208ENST00000475795 C3P01024 1663 aa11.72□□□□□ -0.53
UBE4B-208ENST00000475795 SAMD9LQ8IVG5 1584 aa11.72□□□□□ -0.53
UBE4B-208ENST00000475795 CEBPAP49715 358 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-208ENST00000475795 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
UBE4B-208ENST00000475795 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
UBE4B-208ENST00000475795 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
UBE4B-208ENST00000475795 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
UBE4B-208ENST00000475795 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
UBE4B-208ENST00000475795 SUPT6HQ7KZ85 1726 aaKnown RBP11.66□□□□□ -0.54
UBE4B-208ENST00000475795 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
UBE4B-208ENST00000475795 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
UBE4B-208ENST00000475795 ZNF777Q9ULD5 760 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-208ENST00000475795 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
UBE4B-208ENST00000475795 KIAA1107Q9UPP5 1409 aa11.66□□□□□ -0.54
UBE4B-208ENST00000475795 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
UBE4B-208ENST00000475795 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.55
UBE4B-208ENST00000475795 PLXNC1O60486 1568 aa11.64□□□□□ -0.55
UBE4B-208ENST00000475795 TIAM1Q13009 1591 aa11.64□□□□□ -0.55
UBE4B-208ENST00000475795 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE4B-208ENST00000475795 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
UBE4B-208ENST00000475795 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
UBE4B-208ENST00000475795 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
UBE4B-208ENST00000475795 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
UBE4B-208ENST00000475795 ADGBQ8N7X0 1667 aa11.63□□□□□ -0.55
UBE4B-208ENST00000475795 CERKQ8TCT0 537 aa11.63□□□□□ -0.55
UBE4B-208ENST00000475795 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-208ENST00000475795 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
UBE4B-208ENST00000475795 A2MP01023 1474 aa11.61□□□□□ -0.55
UBE4B-208ENST00000475795 NPATQ14207 1427 aa11.6□□□□□ -0.55
UBE4B-208ENST00000475795 CEP162Q5TB80 1403 aa11.6□□□□□ -0.55
UBE4B-208ENST00000475795 PTPRTO14522 1441 aa11.6□□□□□ -0.55
UBE4B-208ENST00000475795 ZNF142P52746 1687 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-208ENST00000475795 MBD5Q9P267 1494 aa11.58□□□□□ -0.56
UBE4B-208ENST00000475795 ZMYM3Q14202 1370 aa11.58□□□□□ -0.56
UBE4B-208ENST00000475795 NCOA1Q15788 1441 aa11.58□□□□□ -0.56
UBE4B-208ENST00000475795 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
UBE4B-208ENST00000475795 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-208ENST00000475795 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
UBE4B-208ENST00000475795 RTEL1-TNFRSF6BF6WH68 1400 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms