RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 HECW2Q9P2P5 1572 aa17.69■□□□□ 0.42
CALD1-217ENST00000475772 ABCA9Q8IUA7 1624 aa17.68■□□□□ 0.42
CALD1-217ENST00000475772 KIF21BO75037 1637 aa17.66■□□□□ 0.42
CALD1-217ENST00000475772 RAPGEF6Q8TEU7 1601 aa17.66■□□□□ 0.42
CALD1-217ENST00000475772 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
CALD1-217ENST00000475772 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
CALD1-217ENST00000475772 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
CALD1-217ENST00000475772 NUP153P49790 1475 aaKnown RBP17.62■□□□□ 0.41
CALD1-217ENST00000475772 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
CALD1-217ENST00000475772 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
CALD1-217ENST00000475772 NEO1Q92859 1461 aa17.57■□□□□ 0.4
CALD1-217ENST00000475772 ADAMTSL3P82987 1691 aa17.57■□□□□ 0.4
CALD1-217ENST00000475772 EEA1Q15075 1411 aa17.56■□□□□ 0.4
CALD1-217ENST00000475772 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
CALD1-217ENST00000475772 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
CALD1-217ENST00000475772 PTPRMP28827 1452 aa17.52■□□□□ 0.4
CALD1-217ENST00000475772 BCORL1Q5H9F3 1711 aa17.5■□□□□ 0.39
CALD1-217ENST00000475772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.39
CALD1-217ENST00000475772 AKNAQ7Z591 1439 aa17.48■□□□□ 0.39
CALD1-217ENST00000475772 RICTORQ6R327 1708 aa17.48■□□□□ 0.39
CALD1-217ENST00000475772 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
CALD1-217ENST00000475772 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
CALD1-217ENST00000475772 FANCAO15360 1455 aa17.44■□□□□ 0.38
CALD1-217ENST00000475772 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
CALD1-217ENST00000475772 TTC37Q6PGP7 1564 aa17.44■□□□□ 0.38
CALD1-217ENST00000475772 ARID4BQ4LE39 1312 aaPredicted RBP17.44■□□□□ 0.38
CALD1-217ENST00000475772 SIGLEC1Q9BZZ2 1709 aa17.43■□□□□ 0.38
CALD1-217ENST00000475772 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
CALD1-217ENST00000475772 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
CALD1-217ENST00000475772 YEATS2Q9ULM3 1422 aa17.39■□□□□ 0.38
CALD1-217ENST00000475772 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
CALD1-217ENST00000475772 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
CALD1-217ENST00000475772 PLCH2O75038 1416 aa17.38■□□□□ 0.37
CALD1-217ENST00000475772 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
CALD1-217ENST00000475772 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
CALD1-217ENST00000475772 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
CALD1-217ENST00000475772 UBTFP17480 764 aaKnown RBP17.36■□□□□ 0.37
CALD1-217ENST00000475772 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
CALD1-217ENST00000475772 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
CALD1-217ENST00000475772 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
CALD1-217ENST00000475772 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
CALD1-217ENST00000475772 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
CALD1-217ENST00000475772 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
CALD1-217ENST00000475772 SCAPERQ9BY12 1400 aa17.35■□□□□ 0.37
CALD1-217ENST00000475772 FBXO41Q8TF61 875 aa17.34■□□□□ 0.37
CALD1-217ENST00000475772 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.37
CALD1-217ENST00000475772 ATP1B4Q9UN42 357 aaPredicted RBP17.33■□□□□ 0.36
CALD1-217ENST00000475772 MAGI2Q86UL8 1455 aa17.32■□□□□ 0.36
CALD1-217ENST00000475772 HSPA2P54652 639 aa17.31■□□□□ 0.36
CALD1-217ENST00000475772 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
CALD1-217ENST00000475772 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
CALD1-217ENST00000475772 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
CALD1-217ENST00000475772 MLECQ14165 292 aa17.3■□□□□ 0.36
CALD1-217ENST00000475772 EFCAB2Q5VUJ9 269 aa17.29■□□□□ 0.36
CALD1-217ENST00000475772 KIF14Q15058 1648 aa17.29■□□□□ 0.36
CALD1-217ENST00000475772 MYO5CQ9NQX4 1742 aa17.28■□□□□ 0.36
CALD1-217ENST00000475772 ATP10AO60312 1499 aa17.26■□□□□ 0.35
CALD1-217ENST00000475772 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
CALD1-217ENST00000475772 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
CALD1-217ENST00000475772 TROQ12816 1431 aaPredicted RBP17.25■□□□□ 0.35
CALD1-217ENST00000475772 AFAP1Q8N556 730 aa17.25■□□□□ 0.35
CALD1-217ENST00000475772 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
CALD1-217ENST00000475772 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
CALD1-217ENST00000475772 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
CALD1-217ENST00000475772 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
CALD1-217ENST00000475772 CDC42BPBQ9Y5S2 1711 aa17.22■□□□□ 0.35
CALD1-217ENST00000475772 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
CALD1-217ENST00000475772 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
CALD1-217ENST00000475772 FKBP8Q14318 412 aa17.2■□□□□ 0.34
CALD1-217ENST00000475772 KDM5CP41229 1560 aa17.19■□□□□ 0.34
CALD1-217ENST00000475772 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
CALD1-217ENST00000475772 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
CALD1-217ENST00000475772 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
CALD1-217ENST00000475772 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
CALD1-217ENST00000475772 CLIP1P30622 1438 aa17.15■□□□□ 0.34
CALD1-217ENST00000475772 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
CALD1-217ENST00000475772 DIP2CQ9Y2E4 1556 aa17.15■□□□□ 0.34
CALD1-217ENST00000475772 CASKIN1Q8WXD9 1431 aa17.14■□□□□ 0.33
CALD1-217ENST00000475772 MLH3Q9UHC1 1453 aa17.13■□□□□ 0.33
CALD1-217ENST00000475772 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
CALD1-217ENST00000475772 ABCA6Q8N139 1617 aa17.12■□□□□ 0.33
CALD1-217ENST00000475772 PREX1Q8TCU6 1659 aa17.12■□□□□ 0.33
CALD1-217ENST00000475772 STRCQ7RTU9 1775 aa17.12■□□□□ 0.33
CALD1-217ENST00000475772 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
CALD1-217ENST00000475772 PREX2Q70Z35 1606 aa17.11■□□□□ 0.33
CALD1-217ENST00000475772 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
CALD1-217ENST00000475772 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
CALD1-217ENST00000475772 ABCC1P33527 1531 aa17.1■□□□□ 0.33
CALD1-217ENST00000475772 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
CALD1-217ENST00000475772 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
CALD1-217ENST00000475772 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
CALD1-217ENST00000475772 C3P01024 1663 aa17.07■□□□□ 0.32
CALD1-217ENST00000475772 AGLP35573 1532 aa17.07■□□□□ 0.32
CALD1-217ENST00000475772 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
CALD1-217ENST00000475772 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
CALD1-217ENST00000475772 PROM2Q8N271 834 aa17.03■□□□□ 0.32
CALD1-217ENST00000475772 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.32
CALD1-217ENST00000475772 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.32
CALD1-217ENST00000475772 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
CALD1-217ENST00000475772 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms