RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
CCDC57-208ENST00000475635 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
CCDC57-208ENST00000475635 POGZQ7Z3K3 1410 aa20.56■□□□□ 0.88
CCDC57-208ENST00000475635 KIF14Q15058 1648 aa20.56■□□□□ 0.88
CCDC57-208ENST00000475635 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
CCDC57-208ENST00000475635 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
CCDC57-208ENST00000475635 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
CCDC57-208ENST00000475635 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
CCDC57-208ENST00000475635 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
CCDC57-208ENST00000475635 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
CCDC57-208ENST00000475635 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
CCDC57-208ENST00000475635 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
CCDC57-208ENST00000475635 MLECQ14165 292 aa20.47■□□□□ 0.87
CCDC57-208ENST00000475635 ARHGAP5Q13017 1502 aa20.47■□□□□ 0.87
CCDC57-208ENST00000475635 ATP10AO60312 1499 aa20.46■□□□□ 0.87
CCDC57-208ENST00000475635 CLIP1P30622 1438 aa20.45■□□□□ 0.86
CCDC57-208ENST00000475635 C9orf84Q5VXU9 1444 aa20.44■□□□□ 0.86
CCDC57-208ENST00000475635 FBXO41Q8TF61 875 aa20.44■□□□□ 0.86
CCDC57-208ENST00000475635 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
CCDC57-208ENST00000475635 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
CCDC57-208ENST00000475635 KDM5CP41229 1560 aa20.42■□□□□ 0.86
CCDC57-208ENST00000475635 HSPA2P54652 639 aa20.41■□□□□ 0.86
CCDC57-208ENST00000475635 PREX2Q70Z35 1606 aa20.41■□□□□ 0.86
CCDC57-208ENST00000475635 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
CCDC57-208ENST00000475635 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
CCDC57-208ENST00000475635 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
CCDC57-208ENST00000475635 CDC42BPAQ5VT25 1732 aa20.38■□□□□ 0.85
CCDC57-208ENST00000475635 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
CCDC57-208ENST00000475635 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
CCDC57-208ENST00000475635 ITSN2Q9NZM3 1697 aa20.37■□□□□ 0.85
CCDC57-208ENST00000475635 DIP2CQ9Y2E4 1556 aa20.37■□□□□ 0.85
CCDC57-208ENST00000475635 ABCA6Q8N139 1617 aa20.35■□□□□ 0.85
CCDC57-208ENST00000475635 ABCC1P33527 1531 aa20.34■□□□□ 0.85
CCDC57-208ENST00000475635 MYT1LQ9UL68 1186 aa20.34■□□□□ 0.85
CCDC57-208ENST00000475635 REREQ9P2R6 1566 aa20.33■□□□□ 0.84
CCDC57-208ENST00000475635 MLH3Q9UHC1 1453 aa20.31■□□□□ 0.84
CCDC57-208ENST00000475635 CEBPAP49715 358 aaPredicted RBP20.3■□□□□ 0.84
CCDC57-208ENST00000475635 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
CCDC57-208ENST00000475635 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
CCDC57-208ENST00000475635 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
CCDC57-208ENST00000475635 C3P01024 1663 aa20.29■□□□□ 0.84
CCDC57-208ENST00000475635 STRCQ7RTU9 1775 aa20.27■□□□□ 0.84
CCDC57-208ENST00000475635 AGLP35573 1532 aa20.25■□□□□ 0.83
CCDC57-208ENST00000475635 SAMD9LQ8IVG5 1584 aa20.24■□□□□ 0.83
CCDC57-208ENST00000475635 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
CCDC57-208ENST00000475635 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
CCDC57-208ENST00000475635 SYCP2Q9BX26 1530 aa20.2■□□□□ 0.82
CCDC57-208ENST00000475635 SUPT6HQ7KZ85 1726 aaKnown RBP20.19■□□□□ 0.82
CCDC57-208ENST00000475635 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
CCDC57-208ENST00000475635 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
CCDC57-208ENST00000475635 ESF1Q9H501 851 aaKnown RBP20.17■□□□□ 0.82
CCDC57-208ENST00000475635 MROH2AA6NES4 1674 aa20.16■□□□□ 0.82
CCDC57-208ENST00000475635 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
CCDC57-208ENST00000475635 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
CCDC57-208ENST00000475635 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
CCDC57-208ENST00000475635 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
CCDC57-208ENST00000475635 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
CCDC57-208ENST00000475635 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCDC57-208ENST00000475635 PLEKHH2Q8IVE3 1493 aa20.11■□□□□ 0.81
CCDC57-208ENST00000475635 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
CCDC57-208ENST00000475635 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
CCDC57-208ENST00000475635 CLTCQ00610 1675 aaKnown RBP20.1■□□□□ 0.81
CCDC57-208ENST00000475635 CFDP1Q9UEE9 299 aaPredicted RBP20.1■□□□□ 0.81
CCDC57-208ENST00000475635 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
CCDC57-208ENST00000475635 PLXNC1O60486 1568 aa20.09■□□□□ 0.81
CCDC57-208ENST00000475635 ADGBQ8N7X0 1667 aa20.08■□□□□ 0.81
CCDC57-208ENST00000475635 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
CCDC57-208ENST00000475635 PTPRTO14522 1441 aa20.06■□□□□ 0.8
CCDC57-208ENST00000475635 A2MP01023 1474 aa20.05■□□□□ 0.8
CCDC57-208ENST00000475635 NPATQ14207 1427 aa20.05■□□□□ 0.8
CCDC57-208ENST00000475635 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
CCDC57-208ENST00000475635 ZMYM3Q14202 1370 aa20.04■□□□□ 0.8
CCDC57-208ENST00000475635 NCOA1Q15788 1441 aa20.03■□□□□ 0.8
CCDC57-208ENST00000475635 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.8
CCDC57-208ENST00000475635 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.79
CCDC57-208ENST00000475635 ZNF142P52746 1687 aaPredicted RBP20.01■□□□□ 0.79
CCDC57-208ENST00000475635 ZNF644Q9H582 1327 aaPredicted RBP20■□□□□ 0.79
CCDC57-208ENST00000475635 LTBP4Q8N2S1 1624 aa19.98■□□□□ 0.79
CCDC57-208ENST00000475635 MBD5Q9P267 1494 aa19.98■□□□□ 0.79
CCDC57-208ENST00000475635 CEP162Q5TB80 1403 aa19.97■□□□□ 0.79
CCDC57-208ENST00000475635 GGT6Q6P531 493 aa19.97■□□□□ 0.79
CCDC57-208ENST00000475635 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
CCDC57-208ENST00000475635 CEP170BQ9Y4F5 1589 aaPredicted RBP19.95■□□□□ 0.78
CCDC57-208ENST00000475635 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
CCDC57-208ENST00000475635 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
CCDC57-208ENST00000475635 NCKAP5LQ9HCH0 1330 aa19.91■□□□□ 0.78
CCDC57-208ENST00000475635 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
CCDC57-208ENST00000475635 IQSEC2Q5JU85 1478 aa19.91■□□□□ 0.78
CCDC57-208ENST00000475635 CAMSAP2Q08AD1 1489 aa19.9■□□□□ 0.78
CCDC57-208ENST00000475635 PLA2R1Q13018 1463 aa19.9■□□□□ 0.78
CCDC57-208ENST00000475635 CCDC141Q6ZP82 1450 aa19.9■□□□□ 0.78
CCDC57-208ENST00000475635 DHX29Q7Z478 1369 aaKnown RBP19.88■□□□□ 0.77
CCDC57-208ENST00000475635 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
CCDC57-208ENST00000475635 DNMT1P26358 1616 aaKnown RBP19.86■□□□□ 0.77
CCDC57-208ENST00000475635 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
CCDC57-208ENST00000475635 PKD2Q13563 968 aa19.85■□□□□ 0.77
CCDC57-208ENST00000475635 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
CCDC57-208ENST00000475635 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
CCDC57-208ENST00000475635 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.77
CCDC57-208ENST00000475635 ZNF335Q9H4Z2 1342 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms