RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 MAP3K1Q13233 1512 aa16.39■□□□□ 0.22
KCNIP3-206ENST00000475491 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
KCNIP3-206ENST00000475491 POLR3GLQ9BT43 218 aa16.39■□□□□ 0.21
KCNIP3-206ENST00000475491 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
KCNIP3-206ENST00000475491 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
KCNIP3-206ENST00000475491 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
KCNIP3-206ENST00000475491 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
KCNIP3-206ENST00000475491 KIF14Q15058 1648 aa16.37■□□□□ 0.21
KCNIP3-206ENST00000475491 MPHOSPH9Q99550 1183 aa16.37■□□□□ 0.21
KCNIP3-206ENST00000475491 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
KCNIP3-206ENST00000475491 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
KCNIP3-206ENST00000475491 PTPN23Q9H3S7 1636 aa16.35■□□□□ 0.21
KCNIP3-206ENST00000475491 KDM2AQ9Y2K7 1162 aa16.35■□□□□ 0.21
KCNIP3-206ENST00000475491 NAIPQ13075 1403 aa16.34■□□□□ 0.21
KCNIP3-206ENST00000475491 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
KCNIP3-206ENST00000475491 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
KCNIP3-206ENST00000475491 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
KCNIP3-206ENST00000475491 GPATCH8Q9UKJ3 1502 aaKnown RBP16.3■□□□□ 0.2
KCNIP3-206ENST00000475491 ABCC5O15440 1437 aa16.3■□□□□ 0.2
KCNIP3-206ENST00000475491 PKD2Q13563 968 aa16.3■□□□□ 0.2
KCNIP3-206ENST00000475491 DAPK1P53355 1430 aa16.27■□□□□ 0.2
KCNIP3-206ENST00000475491 KDM6BO15054 1643 aa16.27■□□□□ 0.2
KCNIP3-206ENST00000475491 MAPKBP1O60336 1514 aa16.26■□□□□ 0.19
KCNIP3-206ENST00000475491 CAMSAP2Q08AD1 1489 aa16.25■□□□□ 0.19
KCNIP3-206ENST00000475491 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
KCNIP3-206ENST00000475491 L3MBTL2Q969R5 705 aa16.24■□□□□ 0.19
KCNIP3-206ENST00000475491 NUP155O75694 1391 aa16.24■□□□□ 0.19
KCNIP3-206ENST00000475491 PRKCSHP14314 528 aaPredicted RBP16.22■□□□□ 0.19
KCNIP3-206ENST00000475491 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
KCNIP3-206ENST00000475491 ABCA8O94911 1581 aa16.21■□□□□ 0.19
KCNIP3-206ENST00000475491 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
KCNIP3-206ENST00000475491 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.18
KCNIP3-206ENST00000475491 EFCAB2Q5VUJ9 269 aa16.21■□□□□ 0.18
KCNIP3-206ENST00000475491 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
KCNIP3-206ENST00000475491 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
KCNIP3-206ENST00000475491 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
KCNIP3-206ENST00000475491 RAPGEF3O95398 923 aa16.18■□□□□ 0.18
KCNIP3-206ENST00000475491 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
KCNIP3-206ENST00000475491 KIF15Q9NS87 1388 aa16.17■□□□□ 0.18
KCNIP3-206ENST00000475491 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
KCNIP3-206ENST00000475491 C9orf84Q5VXU9 1444 aa16.15■□□□□ 0.18
KCNIP3-206ENST00000475491 GGT6Q6P531 493 aa16.15■□□□□ 0.18
KCNIP3-206ENST00000475491 NCOA1Q15788 1441 aa16.14■□□□□ 0.17
KCNIP3-206ENST00000475491 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
KCNIP3-206ENST00000475491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.17
KCNIP3-206ENST00000475491 KIF3BO15066 747 aa16.13■□□□□ 0.17
KCNIP3-206ENST00000475491 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
KCNIP3-206ENST00000475491 SPAG9O60271 1321 aaKnown RBP16.12■□□□□ 0.17
KCNIP3-206ENST00000475491 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
KCNIP3-206ENST00000475491 DCAF11Q8TEB1 546 aa16.11■□□□□ 0.17
KCNIP3-206ENST00000475491 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
KCNIP3-206ENST00000475491 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
KCNIP3-206ENST00000475491 MLECQ14165 292 aa16.11■□□□□ 0.17
KCNIP3-206ENST00000475491 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
KCNIP3-206ENST00000475491 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
KCNIP3-206ENST00000475491 TTC37Q6PGP7 1564 aa16.1■□□□□ 0.17
KCNIP3-206ENST00000475491 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
KCNIP3-206ENST00000475491 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
KCNIP3-206ENST00000475491 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
KCNIP3-206ENST00000475491 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
KCNIP3-206ENST00000475491 TRAPPC8Q9Y2L5 1435 aa16.09■□□□□ 0.17
KCNIP3-206ENST00000475491 ASXL2Q76L83 1435 aa16.09■□□□□ 0.17
KCNIP3-206ENST00000475491 SCAPERQ9BY12 1400 aa16.08■□□□□ 0.17
KCNIP3-206ENST00000475491 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
KCNIP3-206ENST00000475491 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
KCNIP3-206ENST00000475491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
KCNIP3-206ENST00000475491 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
KCNIP3-206ENST00000475491 PLEKHH2Q8IVE3 1493 aa16.04■□□□□ 0.16
KCNIP3-206ENST00000475491 ARHGEF12Q9NZN5 1544 aa16.03■□□□□ 0.16
KCNIP3-206ENST00000475491 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
KCNIP3-206ENST00000475491 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
KCNIP3-206ENST00000475491 SHROOM2Q13796 1616 aa16.01■□□□□ 0.15
KCNIP3-206ENST00000475491 DNMT1P26358 1616 aaKnown RBP16■□□□□ 0.15
KCNIP3-206ENST00000475491 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
KCNIP3-206ENST00000475491 MBD5Q9P267 1494 aa16■□□□□ 0.15
KCNIP3-206ENST00000475491 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
KCNIP3-206ENST00000475491 C11orf95C9JLR9 678 aaPredicted RBP15.99■□□□□ 0.15
KCNIP3-206ENST00000475491 SAMD9LQ8IVG5 1584 aa15.99■□□□□ 0.15
KCNIP3-206ENST00000475491 ANKRD30BQ9BXX2 1392 aa15.99■□□□□ 0.15
KCNIP3-206ENST00000475491 CCDC141Q6ZP82 1450 aa15.98■□□□□ 0.15
KCNIP3-206ENST00000475491 ROCK1Q13464 1354 aa15.98■□□□□ 0.15
KCNIP3-206ENST00000475491 PLCH2O75038 1416 aa15.98■□□□□ 0.15
KCNIP3-206ENST00000475491 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
KCNIP3-206ENST00000475491 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
KCNIP3-206ENST00000475491 FANCAO15360 1455 aa15.97■□□□□ 0.15
KCNIP3-206ENST00000475491 KDM5BQ9UGL1 1544 aa15.96■□□□□ 0.15
KCNIP3-206ENST00000475491 CD109Q6YHK3 1445 aa15.96■□□□□ 0.15
KCNIP3-206ENST00000475491 CDC42BPBQ9Y5S2 1711 aa15.95■□□□□ 0.14
KCNIP3-206ENST00000475491 NBPF1Q3BBV0 1214 aa15.95■□□□□ 0.14
KCNIP3-206ENST00000475491 CARD11Q9BXL7 1154 aa15.95■□□□□ 0.14
KCNIP3-206ENST00000475491 PZPP20742 1482 aa15.95■□□□□ 0.14
KCNIP3-206ENST00000475491 ITSN2Q9NZM3 1697 aa15.94■□□□□ 0.14
KCNIP3-206ENST00000475491 BCANQ96GW7 911 aa15.93■□□□□ 0.14
KCNIP3-206ENST00000475491 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
KCNIP3-206ENST00000475491 RSPH4AQ5TD94 716 aa15.92■□□□□ 0.14
KCNIP3-206ENST00000475491 KIAA1107Q9UPP5 1409 aa15.89■□□□□ 0.13
KCNIP3-206ENST00000475491 ANP32EQ9BTT0 268 aa15.89■□□□□ 0.13
KCNIP3-206ENST00000475491 ANP32CO43423 234 aa15.88■□□□□ 0.13
KCNIP3-206ENST00000475491 WASHC2AQ641Q2 1341 aa15.88■□□□□ 0.13
KCNIP3-206ENST00000475491 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms