RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 SPRYD3Q8NCJ5 442 aa18.08■□□□□ 0.48
SSPO-205ENST00000475488 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
SSPO-205ENST00000475488 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
SSPO-205ENST00000475488 APBB1O00213 710 aa18.07■□□□□ 0.48
SSPO-205ENST00000475488 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
SSPO-205ENST00000475488 TPM4P67936 248 aa18.05■□□□□ 0.48
SSPO-205ENST00000475488 CEP89Q96ST8 783 aa18.05■□□□□ 0.48
SSPO-205ENST00000475488 RASSF8Q8NHQ8 419 aa18.04■□□□□ 0.48
SSPO-205ENST00000475488 STK26Q9P289 416 aa18.04■□□□□ 0.48
SSPO-205ENST00000475488 MIER1Q8N108 512 aa18.04■□□□□ 0.48
SSPO-205ENST00000475488 TMF1P82094 1093 aa18.03■□□□□ 0.48
SSPO-205ENST00000475488 CREBRFQ8IUR6 639 aa18.03■□□□□ 0.48
SSPO-205ENST00000475488 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
SSPO-205ENST00000475488 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
SSPO-205ENST00000475488 GPATCH3Q96I76 525 aa18.02■□□□□ 0.48
SSPO-205ENST00000475488 CLIP1P30622 1438 aa18.02■□□□□ 0.48
SSPO-205ENST00000475488 HTATSF1O43719 755 aaKnown RBP18.01■□□□□ 0.47
SSPO-205ENST00000475488 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
SSPO-205ENST00000475488 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
SSPO-205ENST00000475488 MARCH6O60337 910 aa18■□□□□ 0.47
SSPO-205ENST00000475488 FRAT2O75474 233 aaPredicted RBP18■□□□□ 0.47
SSPO-205ENST00000475488 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
SSPO-205ENST00000475488 CCDC34Q96HJ3 373 aa17.99■□□□□ 0.47
SSPO-205ENST00000475488 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
SSPO-205ENST00000475488 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
SSPO-205ENST00000475488 GOLGA6L1Q8N7Z2 621 aa17.96■□□□□ 0.47
SSPO-205ENST00000475488 TCEAL9Q9UHQ7 104 aa17.94■□□□□ 0.46
SSPO-205ENST00000475488 SPAG9O60271 1321 aaKnown RBP17.94■□□□□ 0.46
SSPO-205ENST00000475488 MSH5O43196 834 aa17.94■□□□□ 0.46
SSPO-205ENST00000475488 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
SSPO-205ENST00000475488 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
SSPO-205ENST00000475488 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
SSPO-205ENST00000475488 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
SSPO-205ENST00000475488 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
SSPO-205ENST00000475488 CTDP1Q9Y5B0 961 aaPredicted RBP17.91■□□□□ 0.46
SSPO-205ENST00000475488 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
SSPO-205ENST00000475488 GGT6Q6P531 493 aa17.9■□□□□ 0.46
SSPO-205ENST00000475488 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
SSPO-205ENST00000475488 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
SSPO-205ENST00000475488 PTMSP20962 102 aa17.89■□□□□ 0.45
SSPO-205ENST00000475488 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.45
SSPO-205ENST00000475488 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
SSPO-205ENST00000475488 CWC22Q9HCG8 908 aaKnown RBP17.88■□□□□ 0.45
SSPO-205ENST00000475488 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
SSPO-205ENST00000475488 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
SSPO-205ENST00000475488 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
SSPO-205ENST00000475488 SYAP1Q96A49 352 aaPredicted RBP17.87■□□□□ 0.45
SSPO-205ENST00000475488 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
SSPO-205ENST00000475488 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
SSPO-205ENST00000475488 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
SSPO-205ENST00000475488 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
SSPO-205ENST00000475488 STK31Q9BXU1 1019 aa17.86■□□□□ 0.45
SSPO-205ENST00000475488 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
SSPO-205ENST00000475488 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
SSPO-205ENST00000475488 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
SSPO-205ENST00000475488 GBP4Q96PP9 640 aa17.85■□□□□ 0.45
SSPO-205ENST00000475488 TPD52L1Q16890 204 aaPredicted RBP17.84■□□□□ 0.45
SSPO-205ENST00000475488 CSPP1Q1MSJ5 1256 aa17.84■□□□□ 0.45
SSPO-205ENST00000475488 EVA1CP58658 441 aa17.83■□□□□ 0.45
SSPO-205ENST00000475488 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.45
SSPO-205ENST00000475488 RAD21O60216 631 aa17.83■□□□□ 0.45
SSPO-205ENST00000475488 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
SSPO-205ENST00000475488 TPM3P06753 285 aa17.83■□□□□ 0.44
SSPO-205ENST00000475488 ARID3AQ99856 593 aa17.83■□□□□ 0.44
SSPO-205ENST00000475488 HDAC5Q9UQL6 1122 aa17.82■□□□□ 0.44
SSPO-205ENST00000475488 TNNT3P45378 269 aaPredicted RBP17.81■□□□□ 0.44
SSPO-205ENST00000475488 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
SSPO-205ENST00000475488 NOL10Q9BSC4 688 aaKnown RBP17.8■□□□□ 0.44
SSPO-205ENST00000475488 SLC4A10Q6U841 1118 aa17.79■□□□□ 0.44
SSPO-205ENST00000475488 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
SSPO-205ENST00000475488 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSPO-205ENST00000475488 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
SSPO-205ENST00000475488 TSR1Q2NL82 804 aaKnown RBP17.78■□□□□ 0.44
SSPO-205ENST00000475488 TPM2P07951 284 aa17.78■□□□□ 0.44
SSPO-205ENST00000475488 AMOTL1Q8IY63 956 aa17.78■□□□□ 0.44
SSPO-205ENST00000475488 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
SSPO-205ENST00000475488 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
SSPO-205ENST00000475488 FBXW7Q969H0 707 aa17.77■□□□□ 0.43
SSPO-205ENST00000475488 AMPHP49418 695 aa17.76■□□□□ 0.43
SSPO-205ENST00000475488 SF3A1Q15459 793 aaKnown RBP17.76■□□□□ 0.43
SSPO-205ENST00000475488 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
SSPO-205ENST00000475488 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
SSPO-205ENST00000475488 AKAP17AQ02040 695 aaKnown RBP17.76■□□□□ 0.43
SSPO-205ENST00000475488 GZF1Q9H116 711 aaPredicted RBP17.76■□□□□ 0.43
SSPO-205ENST00000475488 HMMRO75330 724 aa17.74■□□□□ 0.43
SSPO-205ENST00000475488 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
SSPO-205ENST00000475488 NOL8Q76FK4 1167 aaKnown RBP17.74■□□□□ 0.43
SSPO-205ENST00000475488 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
SSPO-205ENST00000475488 RWDD1Q9H446 243 aaPredicted RBP17.73■□□□□ 0.43
SSPO-205ENST00000475488 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
SSPO-205ENST00000475488 H3BQV1 296 aa17.71■□□□□ 0.43
SSPO-205ENST00000475488 IFFO2Q5TF58 517 aa17.71■□□□□ 0.43
SSPO-205ENST00000475488 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
SSPO-205ENST00000475488 ROCK2O75116 1388 aaKnown RBP17.7■□□□□ 0.42
SSPO-205ENST00000475488 SETQ01105 290 aaPredicted RBP17.7■□□□□ 0.42
SSPO-205ENST00000475488 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
SSPO-205ENST00000475488 EIF3AQ14152 1382 aaKnown RBP17.69■□□□□ 0.42
SSPO-205ENST00000475488 PHF14O94880 888 aa17.69■□□□□ 0.42
SSPO-205ENST00000475488 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
SSPO-205ENST00000475488 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms