RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 UBTFP17480 764 aaKnown RBP29.59■■■□□ 2.33
PCGF3-209ENST00000475288 CDK11AQ9UQ88 783 aaPredicted RBP29.57■■■□□ 2.32
PCGF3-209ENST00000475288 FBXO41Q8TF61 875 aa29.56■■■□□ 2.32
PCGF3-209ENST00000475288 KIF14Q15058 1648 aa29.54■■■□□ 2.32
PCGF3-209ENST00000475288 EFCAB2Q5VUJ9 269 aa29.53■■■□□ 2.32
PCGF3-209ENST00000475288 TROQ12816 1431 aaPredicted RBP29.52■■■□□ 2.32
PCGF3-209ENST00000475288 ATP10AO60312 1499 aa29.5■■■□□ 2.31
PCGF3-209ENST00000475288 FER1L4A9Z1Z3 1794 aa29.5■■■□□ 2.31
PCGF3-209ENST00000475288 C9orf84Q5VXU9 1444 aa29.48■■■□□ 2.31
PCGF3-209ENST00000475288 ZNF518AQ6AHZ1 1483 aa29.48■■■□□ 2.31
PCGF3-209ENST00000475288 ARHGEF12Q9NZN5 1544 aa29.47■■■□□ 2.31
PCGF3-209ENST00000475288 CLIP1P30622 1438 aa29.46■■■□□ 2.31
PCGF3-209ENST00000475288 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
PCGF3-209ENST00000475288 ATP1B4Q9UN42 357 aaPredicted RBP29.46■■■□□ 2.31
PCGF3-209ENST00000475288 KDM5CP41229 1560 aa29.45■■■□□ 2.31
PCGF3-209ENST00000475288 LRRIQ1Q96JM4 1722 aa29.45■■■□□ 2.3
PCGF3-209ENST00000475288 ARHGAP5Q13017 1502 aa29.42■■■□□ 2.3
PCGF3-209ENST00000475288 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.3
PCGF3-209ENST00000475288 REREQ9P2R6 1566 aa29.38■■■□□ 2.29
PCGF3-209ENST00000475288 CCDC18Q5T9S5 1454 aa29.37■■■□□ 2.29
PCGF3-209ENST00000475288 MLECQ14165 292 aa29.37■■■□□ 2.29
PCGF3-209ENST00000475288 CASKIN1Q8WXD9 1431 aa29.36■■■□□ 2.29
PCGF3-209ENST00000475288 CDC42BPBQ9Y5S2 1711 aa29.35■■■□□ 2.29
PCGF3-209ENST00000475288 HSPA2P54652 639 aa29.35■■■□□ 2.29
PCGF3-209ENST00000475288 PREX2Q70Z35 1606 aa29.34■■■□□ 2.29
PCGF3-209ENST00000475288 MLH3Q9UHC1 1453 aa29.33■■■□□ 2.29
PCGF3-209ENST00000475288 PREX1Q8TCU6 1659 aa29.33■■■□□ 2.29
PCGF3-209ENST00000475288 DIP2CQ9Y2E4 1556 aa29.32■■■□□ 2.28
PCGF3-209ENST00000475288 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
PCGF3-209ENST00000475288 PLPPR3Q6T4P5 718 aa29.29■■■□□ 2.28
PCGF3-209ENST00000475288 ABCC1P33527 1531 aa29.29■■■□□ 2.28
PCGF3-209ENST00000475288 ABCA6Q8N139 1617 aa29.26■■■□□ 2.27
PCGF3-209ENST00000475288 AGLP35573 1532 aa29.25■■■□□ 2.27
PCGF3-209ENST00000475288 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
PCGF3-209ENST00000475288 FYCO1Q9BQS8 1478 aa29.23■■■□□ 2.27
PCGF3-209ENST00000475288 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.27
PCGF3-209ENST00000475288 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.27
PCGF3-209ENST00000475288 SETD1BQ9UPS6 1966 aaKnown RBP29.19■■■□□ 2.26
PCGF3-209ENST00000475288 CEBPAP49715 358 aaPredicted RBP29.17■■■□□ 2.26
PCGF3-209ENST00000475288 KIDINS220Q9ULH0 1771 aa29.16■■■□□ 2.26
PCGF3-209ENST00000475288 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
PCGF3-209ENST00000475288 UHRF1BP1Q6BDS2 1440 aa29.16■■■□□ 2.26
PCGF3-209ENST00000475288 CERKQ8TCT0 537 aa29.14■■■□□ 2.26
PCGF3-209ENST00000475288 C3P01024 1663 aa29.14■■■□□ 2.26
PCGF3-209ENST00000475288 STRCQ7RTU9 1775 aa29.12■■■□□ 2.25
PCGF3-209ENST00000475288 DMRT2Q9Y5R5 561 aa29.11■■■□□ 2.25
PCGF3-209ENST00000475288 CNTLNQ9NXG0 1405 aa29.09■■■□□ 2.25
PCGF3-209ENST00000475288 SAMD9LQ8IVG5 1584 aa29.09■■■□□ 2.25
PCGF3-209ENST00000475288 GPATCH8Q9UKJ3 1502 aaKnown RBP29.07■■■□□ 2.24
PCGF3-209ENST00000475288 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
PCGF3-209ENST00000475288 SYCP2Q9BX26 1530 aa29.04■■■□□ 2.24
PCGF3-209ENST00000475288 KIAA1107Q9UPP5 1409 aa29.03■■■□□ 2.24
PCGF3-209ENST00000475288 MROH2AA6NES4 1674 aa29.02■■■□□ 2.24
PCGF3-209ENST00000475288 PLEKHH2Q8IVE3 1493 aa29.02■■■□□ 2.24
PCGF3-209ENST00000475288 PTPRTO14522 1441 aa29.01■■■□□ 2.23
PCGF3-209ENST00000475288 NPATQ14207 1427 aa28.98■■■□□ 2.23
PCGF3-209ENST00000475288 SPAG9O60271 1321 aaKnown RBP28.97■■■□□ 2.23
PCGF3-209ENST00000475288 INO80Q9ULG1 1556 aaPredicted RBP28.96■■■□□ 2.23
PCGF3-209ENST00000475288 ATP7AQ04656 1500 aa28.96■■■□□ 2.23
PCGF3-209ENST00000475288 PLXNC1O60486 1568 aa28.96■■■□□ 2.23
PCGF3-209ENST00000475288 ZNF777Q9ULD5 760 aaPredicted RBP28.95■■■□□ 2.22
PCGF3-209ENST00000475288 CCNB3Q8WWL7 1395 aa28.92■■■□□ 2.22
PCGF3-209ENST00000475288 CFDP1Q9UEE9 299 aaPredicted RBP28.92■■■□□ 2.22
PCGF3-209ENST00000475288 HNRNPMP52272 730 aaKnown RBP eCLIP28.91■■■□□ 2.224e-7■■■■■ 41.2
PCGF3-209ENST00000475288 NCOA1Q15788 1441 aa28.91■■■□□ 2.22
PCGF3-209ENST00000475288 MTUS2Q5JR59 1369 aa28.89■■■□□ 2.22
PCGF3-209ENST00000475288 SUPT6HQ7KZ85 1726 aaKnown RBP28.89■■■□□ 2.22
PCGF3-209ENST00000475288 A2MP01023 1474 aa28.89■■■□□ 2.22
PCGF3-209ENST00000475288 ZMYM3Q14202 1370 aa28.88■■■□□ 2.21
PCGF3-209ENST00000475288 EHBP1L1Q8N3D4 1523 aa28.84■■■□□ 2.21
PCGF3-209ENST00000475288 TIAM1Q13009 1591 aa28.84■■■□□ 2.21
PCGF3-209ENST00000475288 ADGBQ8N7X0 1667 aa28.84■■■□□ 2.21
PCGF3-209ENST00000475288 LTBP4Q8N2S1 1624 aa28.83■■■□□ 2.21
PCGF3-209ENST00000475288 IQSEC2Q5JU85 1478 aa28.83■■■□□ 2.21
PCGF3-209ENST00000475288 CLTCQ00610 1675 aaKnown RBP28.83■■■□□ 2.21
PCGF3-209ENST00000475288 ZNF142P52746 1687 aaPredicted RBP28.82■■■□□ 2.2
PCGF3-209ENST00000475288 CAMSAP1Q5T5Y3 1602 aa28.81■■■□□ 2.2
PCGF3-209ENST00000475288 PPP6R1Q9UPN7 881 aa28.81■■■□□ 2.2
PCGF3-209ENST00000475288 MBD5Q9P267 1494 aa28.79■■■□□ 2.2
PCGF3-209ENST00000475288 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
PCGF3-209ENST00000475288 RTEL1-TNFRSF6BF6WH68 1400 aa28.78■■■□□ 2.2
PCGF3-209ENST00000475288 MYO3AQ8NEV4 1616 aa28.78■■■□□ 2.2
PCGF3-209ENST00000475288 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
PCGF3-209ENST00000475288 PLA2R1Q13018 1463 aa28.76■■■□□ 2.19
PCGF3-209ENST00000475288 CEP170BQ9Y4F5 1589 aaPredicted RBP28.73■■■□□ 2.19
PCGF3-209ENST00000475288 ZNF644Q9H582 1327 aaPredicted RBP28.71■■■□□ 2.19
PCGF3-209ENST00000475288 GGT6Q6P531 493 aa28.7■■■□□ 2.18
PCGF3-209ENST00000475288 TCOF1Q13428 1488 aaKnown RBP28.69■■■□□ 2.18
PCGF3-209ENST00000475288 FAM135AQ9P2D6 1515 aa28.69■■■□□ 2.18
PCGF3-209ENST00000475288 DHX29Q7Z478 1369 aaKnown RBP28.68■■■□□ 2.18
PCGF3-209ENST00000475288 PKD2Q13563 968 aa28.68■■■□□ 2.18
PCGF3-209ENST00000475288 CCDC141Q6ZP82 1450 aa28.65■■■□□ 2.18
PCGF3-209ENST00000475288 RSPH4AQ5TD94 716 aa28.63■■■□□ 2.17
PCGF3-209ENST00000475288 NCOA2Q15596 1464 aa28.63■■■□□ 2.17
PCGF3-209ENST00000475288 A2ML1A8K2U0 1454 aa28.62■■■□□ 2.17
PCGF3-209ENST00000475288 NCKAP5LQ9HCH0 1330 aa28.62■■■□□ 2.17
PCGF3-209ENST00000475288 CAMSAP2Q08AD1 1489 aa28.6■■■□□ 2.17
PCGF3-209ENST00000475288 KDM5DQ9BY66 1539 aa28.58■■■□□ 2.17
PCGF3-209ENST00000475288 ARHGEF5Q12774 1597 aa28.58■■■□□ 2.17
PCGF3-209ENST00000475288 DNMT1P26358 1616 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms