RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 ADGRL1O94910 1474 aa18.44■□□□□ 0.54
HLA-DOB-208ENST00000475235 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
HLA-DOB-208ENST00000475235 EFCAB2Q5VUJ9 269 aa18.42■□□□□ 0.54
HLA-DOB-208ENST00000475235 LRRIQ1Q96JM4 1722 aa18.39■□□□□ 0.53
HLA-DOB-208ENST00000475235 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.53
HLA-DOB-208ENST00000475235 MSH5O43196 834 aa18.37■□□□□ 0.53
HLA-DOB-208ENST00000475235 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
HLA-DOB-208ENST00000475235 MYO5CQ9NQX4 1742 aa18.36■□□□□ 0.53
HLA-DOB-208ENST00000475235 ARHGAP5Q13017 1502 aa18.35■□□□□ 0.53
HLA-DOB-208ENST00000475235 POGZQ7Z3K3 1410 aa18.34■□□□□ 0.53
HLA-DOB-208ENST00000475235 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.53
HLA-DOB-208ENST00000475235 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
HLA-DOB-208ENST00000475235 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.53
HLA-DOB-208ENST00000475235 RICTORQ6R327 1708 aa18.33■□□□□ 0.52
HLA-DOB-208ENST00000475235 ARHGEF40Q8TER5 1519 aa18.31■□□□□ 0.52
HLA-DOB-208ENST00000475235 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
HLA-DOB-208ENST00000475235 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
HLA-DOB-208ENST00000475235 ZNF518AQ6AHZ1 1483 aa18.28■□□□□ 0.52
HLA-DOB-208ENST00000475235 ARID4BQ4LE39 1312 aaPredicted RBP18.28■□□□□ 0.52
HLA-DOB-208ENST00000475235 PREX2Q70Z35 1606 aa18.28■□□□□ 0.52
HLA-DOB-208ENST00000475235 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
HLA-DOB-208ENST00000475235 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
HLA-DOB-208ENST00000475235 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
HLA-DOB-208ENST00000475235 GPATCH8Q9UKJ3 1502 aaKnown RBP18.24■□□□□ 0.51
HLA-DOB-208ENST00000475235 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
HLA-DOB-208ENST00000475235 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
HLA-DOB-208ENST00000475235 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
HLA-DOB-208ENST00000475235 ABCC1P33527 1531 aa18.22■□□□□ 0.51
HLA-DOB-208ENST00000475235 KDM5CP41229 1560 aa18.22■□□□□ 0.51
HLA-DOB-208ENST00000475235 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
HLA-DOB-208ENST00000475235 ATP10AO60312 1499 aa18.2■□□□□ 0.5
HLA-DOB-208ENST00000475235 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
HLA-DOB-208ENST00000475235 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
HLA-DOB-208ENST00000475235 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
HLA-DOB-208ENST00000475235 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
HLA-DOB-208ENST00000475235 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
HLA-DOB-208ENST00000475235 ADAMTSL3P82987 1691 aa18.19■□□□□ 0.5
HLA-DOB-208ENST00000475235 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
HLA-DOB-208ENST00000475235 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
HLA-DOB-208ENST00000475235 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
HLA-DOB-208ENST00000475235 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
HLA-DOB-208ENST00000475235 HECW2Q9P2P5 1572 aa18.17■□□□□ 0.5
HLA-DOB-208ENST00000475235 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
HLA-DOB-208ENST00000475235 PTPRMP28827 1452 aa18.16■□□□□ 0.5
HLA-DOB-208ENST00000475235 TIAM1Q13009 1591 aa18.15■□□□□ 0.5
HLA-DOB-208ENST00000475235 SAMD9LQ8IVG5 1584 aa18.15■□□□□ 0.5
HLA-DOB-208ENST00000475235 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.5
HLA-DOB-208ENST00000475235 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
HLA-DOB-208ENST00000475235 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
HLA-DOB-208ENST00000475235 MADDQ8WXG6 1647 aa18.13■□□□□ 0.49
HLA-DOB-208ENST00000475235 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
HLA-DOB-208ENST00000475235 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
HLA-DOB-208ENST00000475235 REREQ9P2R6 1566 aa18.11■□□□□ 0.49
HLA-DOB-208ENST00000475235 MLECQ14165 292 aa18.11■□□□□ 0.49
HLA-DOB-208ENST00000475235 DIP2CQ9Y2E4 1556 aa18.1■□□□□ 0.49
HLA-DOB-208ENST00000475235 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
HLA-DOB-208ENST00000475235 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
HLA-DOB-208ENST00000475235 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
HLA-DOB-208ENST00000475235 SIGLEC1Q9BZZ2 1709 aa18.08■□□□□ 0.49
HLA-DOB-208ENST00000475235 ABCA6Q8N139 1617 aa18.07■□□□□ 0.48
HLA-DOB-208ENST00000475235 APLP2Q06481 763 aa18.07■□□□□ 0.48
HLA-DOB-208ENST00000475235 AGLP35573 1532 aa18.06■□□□□ 0.48
HLA-DOB-208ENST00000475235 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
HLA-DOB-208ENST00000475235 RIMS1Q86UR5 1692 aaKnown RBP18.04■□□□□ 0.48
HLA-DOB-208ENST00000475235 MBD5Q9P267 1494 aa18.04■□□□□ 0.48
HLA-DOB-208ENST00000475235 KIDINS220Q9ULH0 1771 aa18.03■□□□□ 0.48
HLA-DOB-208ENST00000475235 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
HLA-DOB-208ENST00000475235 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
HLA-DOB-208ENST00000475235 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
HLA-DOB-208ENST00000475235 INO80Q9ULG1 1556 aaPredicted RBP18.01■□□□□ 0.47
HLA-DOB-208ENST00000475235 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
HLA-DOB-208ENST00000475235 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
HLA-DOB-208ENST00000475235 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
HLA-DOB-208ENST00000475235 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
HLA-DOB-208ENST00000475235 CCDC141Q6ZP82 1450 aa17.99■□□□□ 0.47
HLA-DOB-208ENST00000475235 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
HLA-DOB-208ENST00000475235 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
HLA-DOB-208ENST00000475235 A2MP01023 1474 aa17.97■□□□□ 0.47
HLA-DOB-208ENST00000475235 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
HLA-DOB-208ENST00000475235 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
HLA-DOB-208ENST00000475235 PLXNC1O60486 1568 aa17.94■□□□□ 0.46
HLA-DOB-208ENST00000475235 TSPY4P0CV99 314 aa17.94■□□□□ 0.46
HLA-DOB-208ENST00000475235 TSPY10P0CW01 314 aa17.94■□□□□ 0.46
HLA-DOB-208ENST00000475235 LMTK3Q96Q04 1460 aa17.94■□□□□ 0.46
HLA-DOB-208ENST00000475235 ARHGEF5Q12774 1597 aa17.93■□□□□ 0.46
HLA-DOB-208ENST00000475235 CEBPAP49715 358 aaPredicted RBP17.92■□□□□ 0.46
HLA-DOB-208ENST00000475235 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
HLA-DOB-208ENST00000475235 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
HLA-DOB-208ENST00000475235 GGT6Q6P531 493 aa17.88■□□□□ 0.45
HLA-DOB-208ENST00000475235 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
HLA-DOB-208ENST00000475235 MAST1Q9Y2H9 1570 aa17.84■□□□□ 0.45
HLA-DOB-208ENST00000475235 ZMYM3Q14202 1370 aa17.84■□□□□ 0.45
HLA-DOB-208ENST00000475235 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.45
HLA-DOB-208ENST00000475235 HSPA2P54652 639 aa17.83■□□□□ 0.45
HLA-DOB-208ENST00000475235 DAXXQ9UER7 740 aaPredicted RBP17.83■□□□□ 0.45
HLA-DOB-208ENST00000475235 KIF3BO15066 747 aa17.82■□□□□ 0.44
HLA-DOB-208ENST00000475235 C3P01024 1663 aa17.82■□□□□ 0.44
HLA-DOB-208ENST00000475235 PREX1Q8TCU6 1659 aa17.82■□□□□ 0.44
HLA-DOB-208ENST00000475235 NPATQ14207 1427 aa17.82■□□□□ 0.44
HLA-DOB-208ENST00000475235 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms