RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
PCCB-213ENST00000475214 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
PCCB-213ENST00000475214 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
PCCB-213ENST00000475214 ATP10BO94823 1461 aa15.25■□□□□ 0.03
PCCB-213ENST00000475214 CD109Q6YHK3 1445 aa15.24■□□□□ 0.03
PCCB-213ENST00000475214 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
PCCB-213ENST00000475214 ILDR1Q86SU0 546 aaPredicted RBP15.23■□□□□ 0.03
PCCB-213ENST00000475214 PTPN23Q9H3S7 1636 aa15.22■□□□□ 0.03
PCCB-213ENST00000475214 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
PCCB-213ENST00000475214 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
PCCB-213ENST00000475214 KIF14Q15058 1648 aa15.17■□□□□ 0.02
PCCB-213ENST00000475214 ITSN2Q9NZM3 1697 aa15.17■□□□□ 0.02
PCCB-213ENST00000475214 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
PCCB-213ENST00000475214 CFDP1Q9UEE9 299 aaPredicted RBP15.13■□□□□ 0.01
PCCB-213ENST00000475214 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
PCCB-213ENST00000475214 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
PCCB-213ENST00000475214 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
PCCB-213ENST00000475214 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
PCCB-213ENST00000475214 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
PCCB-213ENST00000475214 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
PCCB-213ENST00000475214 ARAP3Q8WWN8 1544 aa15.08■□□□□ 0.01
PCCB-213ENST00000475214 CDC42BPAQ5VT25 1732 aa15.08■□□□□ 0
PCCB-213ENST00000475214 HFM1A2PYH4 1435 aa15.07■□□□□ 0
PCCB-213ENST00000475214 CAMSAP2Q08AD1 1489 aa15.07■□□□□ 0
PCCB-213ENST00000475214 NEO1Q92859 1461 aa15.07■□□□□ 0
PCCB-213ENST00000475214 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
PCCB-213ENST00000475214 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
PCCB-213ENST00000475214 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
PCCB-213ENST00000475214 DAPK1P53355 1430 aa15.05■□□□□ -0
PCCB-213ENST00000475214 AKNAQ7Z591 1439 aa15.04■□□□□ -0
PCCB-213ENST00000475214 ABCC5O15440 1437 aa15.03■□□□□ -0
PCCB-213ENST00000475214 CHIC2Q9UKJ5 165 aa15.03■□□□□ -0
PCCB-213ENST00000475214 NAIPQ13075 1403 aa15.02■□□□□ -0
PCCB-213ENST00000475214 PREX2Q70Z35 1606 aa15.02□□□□□ -0.01
PCCB-213ENST00000475214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.02□□□□□ -0.01
PCCB-213ENST00000475214 ROCK1Q13464 1354 aa15.01□□□□□ -0.01
PCCB-213ENST00000475214 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
PCCB-213ENST00000475214 ACIN1Q9UKV3 1341 aaKnown RBP15□□□□□ -0.01
PCCB-213ENST00000475214 RRP7BPQ9NSQ0 103 aa15□□□□□ -0.01
PCCB-213ENST00000475214 CDC42BPBQ9Y5S2 1711 aa15□□□□□ -0.01
PCCB-213ENST00000475214 TTC37Q6PGP7 1564 aa14.99□□□□□ -0.01
PCCB-213ENST00000475214 MYO5CQ9NQX4 1742 aa14.99□□□□□ -0.01
PCCB-213ENST00000475214 ADAMTSL3P82987 1691 aa14.99□□□□□ -0.01
PCCB-213ENST00000475214 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
PCCB-213ENST00000475214 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
PCCB-213ENST00000475214 RAPGEF3O95398 923 aa14.97□□□□□ -0.01
PCCB-213ENST00000475214 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
PCCB-213ENST00000475214 CROCC2H7BZ55 1655 aa14.97□□□□□ -0.01
PCCB-213ENST00000475214 ADGBQ8N7X0 1667 aa14.97□□□□□ -0.01
PCCB-213ENST00000475214 PTPRMP28827 1452 aa14.96□□□□□ -0.01
PCCB-213ENST00000475214 FANCAO15360 1455 aa14.95□□□□□ -0.02
PCCB-213ENST00000475214 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
PCCB-213ENST00000475214 ARHGEF5Q12774 1597 aa14.95□□□□□ -0.02
PCCB-213ENST00000475214 PLCH2O75038 1416 aa14.95□□□□□ -0.02
PCCB-213ENST00000475214 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
PCCB-213ENST00000475214 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
PCCB-213ENST00000475214 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
PCCB-213ENST00000475214 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
PCCB-213ENST00000475214 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
PCCB-213ENST00000475214 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
PCCB-213ENST00000475214 SHANK2Q9UPX8 1470 aa14.94□□□□□ -0.02
PCCB-213ENST00000475214 BCORL1Q5H9F3 1711 aa14.93□□□□□ -0.02
PCCB-213ENST00000475214 EFCAB2Q5VUJ9 269 aa14.93□□□□□ -0.02
PCCB-213ENST00000475214 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
PCCB-213ENST00000475214 HNRNPMP52272 730 aaKnown RBP eCLIP14.92□□□□□ -0.021e-7■■■□□ 18.3
PCCB-213ENST00000475214 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
PCCB-213ENST00000475214 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
PCCB-213ENST00000475214 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
PCCB-213ENST00000475214 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
PCCB-213ENST00000475214 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
PCCB-213ENST00000475214 TRIM52Q96A61 297 aa14.9□□□□□ -0.02
PCCB-213ENST00000475214 C9orf84Q5VXU9 1444 aa14.9□□□□□ -0.02
PCCB-213ENST00000475214 KIAA1107Q9UPP5 1409 aa14.9□□□□□ -0.02
PCCB-213ENST00000475214 MADDQ8WXG6 1647 aa14.89□□□□□ -0.03
PCCB-213ENST00000475214 MAGI2Q86UL8 1455 aa14.89□□□□□ -0.03
PCCB-213ENST00000475214 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
PCCB-213ENST00000475214 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
PCCB-213ENST00000475214 RICTORQ6R327 1708 aa14.86□□□□□ -0.03
PCCB-213ENST00000475214 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
PCCB-213ENST00000475214 LMTK3Q96Q04 1460 aa14.86□□□□□ -0.03
PCCB-213ENST00000475214 SCAPERQ9BY12 1400 aa14.85□□□□□ -0.03
PCCB-213ENST00000475214 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
PCCB-213ENST00000475214 MAST1Q9Y2H9 1570 aa14.85□□□□□ -0.03
PCCB-213ENST00000475214 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
PCCB-213ENST00000475214 ABCC1P33527 1531 aa14.83□□□□□ -0.04
PCCB-213ENST00000475214 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
PCCB-213ENST00000475214 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
PCCB-213ENST00000475214 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
PCCB-213ENST00000475214 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
PCCB-213ENST00000475214 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
PCCB-213ENST00000475214 NEUROD1Q13562 356 aa14.8□□□□□ -0.04
PCCB-213ENST00000475214 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
PCCB-213ENST00000475214 ARHGEF12Q9NZN5 1544 aa14.8□□□□□ -0.04
PCCB-213ENST00000475214 ZNF518AQ6AHZ1 1483 aa14.79□□□□□ -0.04
PCCB-213ENST00000475214 SIGLEC1Q9BZZ2 1709 aa14.78□□□□□ -0.04
PCCB-213ENST00000475214 PLXNC1O60486 1568 aa14.78□□□□□ -0.04
PCCB-213ENST00000475214 YEATS2Q9ULM3 1422 aa14.77□□□□□ -0.04
PCCB-213ENST00000475214 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
PCCB-213ENST00000475214 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.05
PCCB-213ENST00000475214 ATP10AO60312 1499 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms