RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 PHLDB1Q86UU1 1377 aa15.3■□□□□ 0.04
PDPN-204ENST00000475043 NEO1Q92859 1461 aa15.3■□□□□ 0.04
PDPN-204ENST00000475043 LRRIQ1Q96JM4 1722 aa15.3■□□□□ 0.04
PDPN-204ENST00000475043 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
PDPN-204ENST00000475043 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
PDPN-204ENST00000475043 ADGRL1O94910 1474 aa15.27■□□□□ 0.04
PDPN-204ENST00000475043 CFAP74Q9C0B2 1584 aa15.27■□□□□ 0.03
PDPN-204ENST00000475043 CLIP1P30622 1438 aa15.26■□□□□ 0.03
PDPN-204ENST00000475043 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
PDPN-204ENST00000475043 FANCAO15360 1455 aa15.26■□□□□ 0.03
PDPN-204ENST00000475043 KIF14Q15058 1648 aa15.25■□□□□ 0.03
PDPN-204ENST00000475043 MYO5CQ9NQX4 1742 aa15.24■□□□□ 0.03
PDPN-204ENST00000475043 CASKIN1Q8WXD9 1431 aa15.24■□□□□ 0.03
PDPN-204ENST00000475043 AKNAQ7Z591 1439 aa15.23■□□□□ 0.03
PDPN-204ENST00000475043 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
PDPN-204ENST00000475043 CCDC18Q5T9S5 1454 aa15.21■□□□□ 0.03
PDPN-204ENST00000475043 TROQ12816 1431 aaPredicted RBP15.21■□□□□ 0.03
PDPN-204ENST00000475043 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
PDPN-204ENST00000475043 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
PDPN-204ENST00000475043 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
PDPN-204ENST00000475043 PLCH2O75038 1416 aa15.19■□□□□ 0.02
PDPN-204ENST00000475043 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
PDPN-204ENST00000475043 ARHGAP5Q13017 1502 aa15.16■□□□□ 0.02
PDPN-204ENST00000475043 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
PDPN-204ENST00000475043 SCAPERQ9BY12 1400 aa15.15■□□□□ 0.02
PDPN-204ENST00000475043 ARHGEF40Q8TER5 1519 aa15.13■□□□□ 0.01
PDPN-204ENST00000475043 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
PDPN-204ENST00000475043 ARID4BQ4LE39 1312 aaPredicted RBP15.13■□□□□ 0.01
PDPN-204ENST00000475043 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
PDPN-204ENST00000475043 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
PDPN-204ENST00000475043 PREX2Q70Z35 1606 aa15.11■□□□□ 0.01
PDPN-204ENST00000475043 ZFYVE16Q7Z3T8 1539 aa15.11■□□□□ 0.01
PDPN-204ENST00000475043 CDC42BPAQ5VT25 1732 aa15.1■□□□□ 0.01
PDPN-204ENST00000475043 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
PDPN-204ENST00000475043 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
PDPN-204ENST00000475043 BCORL1Q5H9F3 1711 aa15.09■□□□□ 0.01
PDPN-204ENST00000475043 YEATS2Q9ULM3 1422 aa15.08■□□□□ 0
PDPN-204ENST00000475043 MAGI2Q86UL8 1455 aa15.08■□□□□ 0
PDPN-204ENST00000475043 ADAMTSL3P82987 1691 aa15.07■□□□□ 0
PDPN-204ENST00000475043 MYT1LQ9UL68 1186 aa15.06■□□□□ 0
PDPN-204ENST00000475043 MTUS2Q5JR59 1369 aa15.06■□□□□ 0
PDPN-204ENST00000475043 ZNF518AQ6AHZ1 1483 aa15.06■□□□□ 0
PDPN-204ENST00000475043 CAPN15O75808 1086 aa15.05■□□□□ -0
PDPN-204ENST00000475043 SIGLEC1Q9BZZ2 1709 aa15.04■□□□□ -0
PDPN-204ENST00000475043 MADDQ8WXG6 1647 aa15.04■□□□□ -0
PDPN-204ENST00000475043 AFAP1Q8N556 730 aa15.04■□□□□ -0
PDPN-204ENST00000475043 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
PDPN-204ENST00000475043 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
PDPN-204ENST00000475043 ABCC1P33527 1531 aa15.03■□□□□ -0
PDPN-204ENST00000475043 KDM5CP41229 1560 aa15.02■□□□□ -0
PDPN-204ENST00000475043 RIMS1Q86UR5 1692 aaKnown RBP15.02□□□□□ -0.01
PDPN-204ENST00000475043 HECW2Q9P2P5 1572 aa15.02□□□□□ -0.01
PDPN-204ENST00000475043 PTPRMP28827 1452 aa15.01□□□□□ -0.01
PDPN-204ENST00000475043 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
PDPN-204ENST00000475043 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
PDPN-204ENST00000475043 ATP10AO60312 1499 aa15.01□□□□□ -0.01
PDPN-204ENST00000475043 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
PDPN-204ENST00000475043 SAMD9LQ8IVG5 1584 aa15□□□□□ -0.01
PDPN-204ENST00000475043 MLECQ14165 292 aa15□□□□□ -0.01
PDPN-204ENST00000475043 ARHGEF12Q9NZN5 1544 aa15□□□□□ -0.01
PDPN-204ENST00000475043 C9orf84Q5VXU9 1444 aa15□□□□□ -0.01
PDPN-204ENST00000475043 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
PDPN-204ENST00000475043 TRAPPC8Q9Y2L5 1435 aa14.99□□□□□ -0.01
PDPN-204ENST00000475043 FER1L4A9Z1Z3 1794 aa14.98□□□□□ -0.01
PDPN-204ENST00000475043 SYCP2Q9BX26 1530 aa14.97□□□□□ -0.01
PDPN-204ENST00000475043 ABCA6Q8N139 1617 aa14.97□□□□□ -0.01
PDPN-204ENST00000475043 DSG3P32926 999 aa14.97□□□□□ -0.01
PDPN-204ENST00000475043 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
PDPN-204ENST00000475043 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
PDPN-204ENST00000475043 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
PDPN-204ENST00000475043 MLH3Q9UHC1 1453 aa14.96□□□□□ -0.01
PDPN-204ENST00000475043 APLP2Q06481 763 aa14.96□□□□□ -0.01
PDPN-204ENST00000475043 TIAM1Q13009 1591 aa14.96□□□□□ -0.01
PDPN-204ENST00000475043 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
PDPN-204ENST00000475043 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
PDPN-204ENST00000475043 KIDINS220Q9ULH0 1771 aa14.94□□□□□ -0.02
PDPN-204ENST00000475043 PLEKHH2Q8IVE3 1493 aa14.93□□□□□ -0.02
PDPN-204ENST00000475043 REREQ9P2R6 1566 aa14.91□□□□□ -0.02
PDPN-204ENST00000475043 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
PDPN-204ENST00000475043 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
PDPN-204ENST00000475043 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
PDPN-204ENST00000475043 ZNF644Q9H582 1327 aaPredicted RBP14.9□□□□□ -0.02
PDPN-204ENST00000475043 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
PDPN-204ENST00000475043 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
PDPN-204ENST00000475043 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
PDPN-204ENST00000475043 INO80Q9ULG1 1556 aaPredicted RBP14.87□□□□□ -0.03
PDPN-204ENST00000475043 AGLP35573 1532 aa14.86□□□□□ -0.03
PDPN-204ENST00000475043 ESF1Q9H501 851 aaKnown RBP14.85□□□□□ -0.03
PDPN-204ENST00000475043 MAP3K1Q13233 1512 aa14.85□□□□□ -0.03
PDPN-204ENST00000475043 CAMSAP2Q08AD1 1489 aa14.84□□□□□ -0.03
PDPN-204ENST00000475043 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
PDPN-204ENST00000475043 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
PDPN-204ENST00000475043 KANK4Q5T7N3 995 aaPredicted RBP14.84□□□□□ -0.03
PDPN-204ENST00000475043 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
PDPN-204ENST00000475043 MBD5Q9P267 1494 aa14.83□□□□□ -0.03
PDPN-204ENST00000475043 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.04
PDPN-204ENST00000475043 ADGBQ8N7X0 1667 aa14.83□□□□□ -0.04
PDPN-204ENST00000475043 A2MP01023 1474 aa14.82□□□□□ -0.04
PDPN-204ENST00000475043 C3P01024 1663 aa14.81□□□□□ -0.04
PDPN-204ENST00000475043 PREX1Q8TCU6 1659 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms