RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 PREX2Q70Z35 1606 aa31.41■■■□□ 2.62
NPM3-204ENST00000474993 CDC42BPAQ5VT25 1732 aa31.4■■■□□ 2.62
NPM3-204ENST00000474993 KIF13AQ9H1H9 1805 aa31.39■■■□□ 2.62
NPM3-204ENST00000474993 ZNF777Q9ULD5 760 aaPredicted RBP31.37■■■□□ 2.61
NPM3-204ENST00000474993 TEX14Q8IWB6 1497 aa31.37■■■□□ 2.61
NPM3-204ENST00000474993 FANCAO15360 1455 aa31.34■■■□□ 2.61
NPM3-204ENST00000474993 RRBP1Q9P2E9 1410 aaKnown RBP31.34■■■□□ 2.61
NPM3-204ENST00000474993 CDC42BPBQ9Y5S2 1711 aa31.32■■■□□ 2.61
NPM3-204ENST00000474993 PLEKHH2Q8IVE3 1493 aa31.32■■■□□ 2.6
NPM3-204ENST00000474993 NEO1Q92859 1461 aa31.32■■■□□ 2.6
NPM3-204ENST00000474993 CFAP74Q9C0B2 1584 aa31.31■■■□□ 2.6
NPM3-204ENST00000474993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.3■■■□□ 2.6
NPM3-204ENST00000474993 FAM50AQ14320 339 aaKnown RBP31.3■■■□□ 2.6
NPM3-204ENST00000474993 TCOF1Q13428 1488 aaKnown RBP31.28■■■□□ 2.6
NPM3-204ENST00000474993 PTPN23Q9H3S7 1636 aa31.28■■■□□ 2.6
NPM3-204ENST00000474993 AKNAQ7Z591 1439 aa31.26■■■□□ 2.6
NPM3-204ENST00000474993 KIAA1107Q9UPP5 1409 aa31.25■■■□□ 2.59
NPM3-204ENST00000474993 RSPH4AQ5TD94 716 aa31.25■■■□□ 2.59
NPM3-204ENST00000474993 CAMSAP2Q08AD1 1489 aa31.25■■■□□ 2.59
NPM3-204ENST00000474993 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
NPM3-204ENST00000474993 TRIM26Q12899 539 aaPredicted RBP31.23■■■□□ 2.59
NPM3-204ENST00000474993 TSPOAP1O95153 1857 aa31.22■■■□□ 2.59
NPM3-204ENST00000474993 SAMD9LQ8IVG5 1584 aa31.2■■■□□ 2.58
NPM3-204ENST00000474993 ADGRL1O94910 1474 aa31.2■■■□□ 2.58
NPM3-204ENST00000474993 PPRC1Q5VV67 1664 aaKnown RBP31.18■■■□□ 2.58
NPM3-204ENST00000474993 SCAPERQ9BY12 1400 aa31.16■■■□□ 2.58
NPM3-204ENST00000474993 HNRNPMP52272 730 aaKnown RBP eCLIP31.16■■■□□ 2.58
NPM3-204ENST00000474993 ABCC1P33527 1531 aa31.15■■■□□ 2.58
NPM3-204ENST00000474993 TSPY4P0CV99 314 aa31.11■■■□□ 2.57
NPM3-204ENST00000474993 TSPY10P0CW01 314 aa31.11■■■□□ 2.57
NPM3-204ENST00000474993 SYCP2Q9BX26 1530 aa31.11■■■□□ 2.57
NPM3-204ENST00000474993 DENND4BO75064 1496 aaPredicted RBP31.1■■■□□ 2.57
NPM3-204ENST00000474993 MBD5Q9P267 1494 aa31.1■■■□□ 2.57
NPM3-204ENST00000474993 ARHGEF5Q12774 1597 aa31.09■■■□□ 2.57
NPM3-204ENST00000474993 CCDC141Q6ZP82 1450 aa31.08■■■□□ 2.57
NPM3-204ENST00000474993 ARHGEF12Q9NZN5 1544 aa31.07■■■□□ 2.56
NPM3-204ENST00000474993 DAPK1P53355 1430 aa31.06■■■□□ 2.56
NPM3-204ENST00000474993 ITGAEP38570 1179 aa31.05■■■□□ 2.56
NPM3-204ENST00000474993 ZNF518AQ6AHZ1 1483 aa31.05■■■□□ 2.56
NPM3-204ENST00000474993 DNMT1P26358 1616 aaKnown RBP31.04■■■□□ 2.56
NPM3-204ENST00000474993 ABCC5O15440 1437 aa31.04■■■□□ 2.56
NPM3-204ENST00000474993 POGZQ7Z3K3 1410 aa31.04■■■□□ 2.56
NPM3-204ENST00000474993 TRAPPC8Q9Y2L5 1435 aa31.03■■■□□ 2.56
NPM3-204ENST00000474993 AFAP1Q8N556 730 aa31.01■■■□□ 2.55
NPM3-204ENST00000474993 SHANK2Q9UPX8 1470 aa30.99■■■□□ 2.55
NPM3-204ENST00000474993 SPAG9O60271 1321 aaKnown RBP30.98■■■□□ 2.55
NPM3-204ENST00000474993 RAPGEF3O95398 923 aa30.98■■■□□ 2.55
NPM3-204ENST00000474993 MYT1LQ9UL68 1186 aa30.95■■■□□ 2.55
NPM3-204ENST00000474993 C9orf84Q5VXU9 1444 aa30.95■■■□□ 2.54
NPM3-204ENST00000474993 RTEL1-TNFRSF6BF6WH68 1400 aa30.94■■■□□ 2.54
NPM3-204ENST00000474993 CHIC2Q9UKJ5 165 aa30.92■■■□□ 2.54
NPM3-204ENST00000474993 ANKRD30AQ9BXX3 1397 aa30.92■■■□□ 2.54
NPM3-204ENST00000474993 KDM5CP41229 1560 aa30.91■■■□□ 2.54
NPM3-204ENST00000474993 MAST1Q9Y2H9 1570 aa30.91■■■□□ 2.54
NPM3-204ENST00000474993 ROCK1Q13464 1354 aa30.91■■■□□ 2.54
NPM3-204ENST00000474993 KDM6BO15054 1643 aa30.9■■■□□ 2.54
NPM3-204ENST00000474993 CROCC2H7BZ55 1655 aa30.9■■■□□ 2.54
NPM3-204ENST00000474993 PTPRKQ15262 1439 aa30.9■■■□□ 2.54
NPM3-204ENST00000474993 MLH3Q9UHC1 1453 aa30.89■■■□□ 2.54
NPM3-204ENST00000474993 COL17A1Q9UMD9 1497 aaPredicted RBP30.89■■■□□ 2.54
NPM3-204ENST00000474993 RICTORQ6R327 1708 aa30.89■■■□□ 2.54
NPM3-204ENST00000474993 MAGI2Q86UL8 1455 aa30.88■■■□□ 2.53
NPM3-204ENST00000474993 PCGF6Q9BYE7 350 aa30.86■■■□□ 2.53
NPM3-204ENST00000474993 ADGRL2O95490 1459 aa30.86■■■□□ 2.53
NPM3-204ENST00000474993 ZMYM4Q5VZL5 1548 aa30.85■■■□□ 2.53
NPM3-204ENST00000474993 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
NPM3-204ENST00000474993 ATP7AQ04656 1500 aa30.83■■■□□ 2.53
NPM3-204ENST00000474993 NCOA1Q15788 1441 aa30.83■■■□□ 2.53
NPM3-204ENST00000474993 HECW2Q9P2P5 1572 aa30.83■■■□□ 2.53
NPM3-204ENST00000474993 ZFYVE16Q7Z3T8 1539 aa30.81■■■□□ 2.52
NPM3-204ENST00000474993 INO80Q9ULG1 1556 aaPredicted RBP30.8■■■□□ 2.52
NPM3-204ENST00000474993 ADGBQ8N7X0 1667 aa30.8■■■□□ 2.52
NPM3-204ENST00000474993 RRP7BPQ9NSQ0 103 aa30.79■■■□□ 2.52
NPM3-204ENST00000474993 KIF15Q9NS87 1388 aa30.78■■■□□ 2.52
NPM3-204ENST00000474993 PLXNC1O60486 1568 aa30.77■■■□□ 2.52
NPM3-204ENST00000474993 HFM1A2PYH4 1435 aa30.75■■■□□ 2.51
NPM3-204ENST00000474993 KIDINS220Q9ULH0 1771 aa30.74■■■□□ 2.51
NPM3-204ENST00000474993 ACIN1Q9UKV3 1341 aaKnown RBP30.71■■■□□ 2.51
NPM3-204ENST00000474993 DUOX2Q9NRD8 1548 aa30.7■■■□□ 2.51
NPM3-204ENST00000474993 NAIPQ13075 1403 aa30.69■■■□□ 2.5
NPM3-204ENST00000474993 SETD5Q9C0A6 1442 aa30.69■■■□□ 2.5
NPM3-204ENST00000474993 YEATS2Q9ULM3 1422 aa30.69■■■□□ 2.5
NPM3-204ENST00000474993 ATP10AO60312 1499 aa30.69■■■□□ 2.5
NPM3-204ENST00000474993 DHX29Q7Z478 1369 aaKnown RBP30.68■■■□□ 2.5
NPM3-204ENST00000474993 ANKRD50Q9ULJ7 1429 aa30.66■■■□□ 2.5
NPM3-204ENST00000474993 A2MP01023 1474 aa30.66■■■□□ 2.5
NPM3-204ENST00000474993 DIP2CQ9Y2E4 1556 aa30.65■■■□□ 2.5
NPM3-204ENST00000474993 ERBINQ96RT1 1412 aa30.64■■■□□ 2.5
NPM3-204ENST00000474993 ARHGEF40Q8TER5 1519 aa30.64■■■□□ 2.5
NPM3-204ENST00000474993 ABCA6Q8N139 1617 aa30.63■■■□□ 2.49
NPM3-204ENST00000474993 HRCP23327 699 aa30.63■■■□□ 2.49
NPM3-204ENST00000474993 GCC2Q8IWJ2 1684 aa30.62■■■□□ 2.49
NPM3-204ENST00000474993 REREQ9P2R6 1566 aa30.58■■■□□ 2.49
NPM3-204ENST00000474993 RAB3GAP2Q9H2M9 1393 aa30.55■■■□□ 2.48
NPM3-204ENST00000474993 KIF3BO15066 747 aa30.53■■■□□ 2.48
NPM3-204ENST00000474993 EIF2AK4Q9P2K8 1649 aaKnown RBP30.51■■■□□ 2.48
NPM3-204ENST00000474993 AGLP35573 1532 aa30.51■■■□□ 2.47
NPM3-204ENST00000474993 ARID4BQ4LE39 1312 aaPredicted RBP30.47■■■□□ 2.47
NPM3-204ENST00000474993 TRIM52Q96A61 297 aa30.46■■■□□ 2.47
NPM3-204ENST00000474993 KANK1Q14678 1352 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms