RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 EFCAB2Q5VUJ9 269 aa25.79■■□□□ 1.72
SRRT-209ENST00000474896 FBXO41Q8TF61 875 aa25.79■■□□□ 1.72
SRRT-209ENST00000474896 MAGI2Q86UL8 1455 aa25.79■■□□□ 1.72
SRRT-209ENST00000474896 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
SRRT-209ENST00000474896 PCF11O94913 1555 aaKnown RBP25.78■■□□□ 1.72
SRRT-209ENST00000474896 LMTK3Q96Q04 1460 aa25.77■■□□□ 1.72
SRRT-209ENST00000474896 HECW1Q76N89 1606 aa25.77■■□□□ 1.72
SRRT-209ENST00000474896 SIGLEC1Q9BZZ2 1709 aa25.74■■□□□ 1.71
SRRT-209ENST00000474896 HSPA2P54652 639 aa25.73■■□□□ 1.71
SRRT-209ENST00000474896 ATP10AO60312 1499 aa25.69■■□□□ 1.7
SRRT-209ENST00000474896 MYO5CQ9NQX4 1742 aa25.68■■□□□ 1.7
SRRT-209ENST00000474896 TROQ12816 1431 aaPredicted RBP25.67■■□□□ 1.7
SRRT-209ENST00000474896 KIF14Q15058 1648 aa25.66■■□□□ 1.7
SRRT-209ENST00000474896 AFAP1Q8N556 730 aa25.66■■□□□ 1.7
SRRT-209ENST00000474896 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.7
SRRT-209ENST00000474896 CLIP1P30622 1438 aa25.63■■□□□ 1.69
SRRT-209ENST00000474896 C9orf84Q5VXU9 1444 aa25.63■■□□□ 1.69
SRRT-209ENST00000474896 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
SRRT-209ENST00000474896 FER1L4A9Z1Z3 1794 aa25.61■■□□□ 1.69
SRRT-209ENST00000474896 ZNF518AQ6AHZ1 1483 aa25.6■■□□□ 1.69
SRRT-209ENST00000474896 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
SRRT-209ENST00000474896 LRRIQ1Q96JM4 1722 aa25.59■■□□□ 1.69
SRRT-209ENST00000474896 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
SRRT-209ENST00000474896 CASKIN1Q8WXD9 1431 aa25.52■■□□□ 1.68
SRRT-209ENST00000474896 KDM5CP41229 1560 aa25.52■■□□□ 1.68
SRRT-209ENST00000474896 CDC42BPBQ9Y5S2 1711 aa25.51■■□□□ 1.68
SRRT-209ENST00000474896 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
SRRT-209ENST00000474896 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
SRRT-209ENST00000474896 CERKQ8TCT0 537 aa25.47■■□□□ 1.67
SRRT-209ENST00000474896 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
SRRT-209ENST00000474896 DIP2CQ9Y2E4 1556 aa25.46■■□□□ 1.67
SRRT-209ENST00000474896 PREX1Q8TCU6 1659 aa25.43■■□□□ 1.66
SRRT-209ENST00000474896 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
SRRT-209ENST00000474896 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
SRRT-209ENST00000474896 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
SRRT-209ENST00000474896 SETD1BQ9UPS6 1966 aaKnown RBP25.41■■□□□ 1.66
SRRT-209ENST00000474896 ABCC1P33527 1531 aa25.41■■□□□ 1.66
SRRT-209ENST00000474896 REREQ9P2R6 1566 aa25.4■■□□□ 1.66
SRRT-209ENST00000474896 ABCA6Q8N139 1617 aa25.4■■□□□ 1.66
SRRT-209ENST00000474896 DMRT2Q9Y5R5 561 aa25.39■■□□□ 1.66
SRRT-209ENST00000474896 UHRF1BP1Q6BDS2 1440 aa25.38■■□□□ 1.65
SRRT-209ENST00000474896 ITSN2Q9NZM3 1697 aa25.37■■□□□ 1.65
SRRT-209ENST00000474896 CDC42BPAQ5VT25 1732 aa25.37■■□□□ 1.65
SRRT-209ENST00000474896 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
SRRT-209ENST00000474896 AGLP35573 1532 aa25.36■■□□□ 1.65
SRRT-209ENST00000474896 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.65
SRRT-209ENST00000474896 KIDINS220Q9ULH0 1771 aa25.33■■□□□ 1.65
SRRT-209ENST00000474896 STRCQ7RTU9 1775 aa25.32■■□□□ 1.64
SRRT-209ENST00000474896 GPATCH8Q9UKJ3 1502 aaKnown RBP25.32■■□□□ 1.64
SRRT-209ENST00000474896 C3P01024 1663 aa25.31■■□□□ 1.64
SRRT-209ENST00000474896 SPAG9O60271 1321 aaKnown RBP25.3■■□□□ 1.64
SRRT-209ENST00000474896 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
SRRT-209ENST00000474896 SAMD9LQ8IVG5 1584 aa25.28■■□□□ 1.64
SRRT-209ENST00000474896 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
SRRT-209ENST00000474896 SYCP2Q9BX26 1530 aa25.25■■□□□ 1.63
SRRT-209ENST00000474896 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
SRRT-209ENST00000474896 KIAA1107Q9UPP5 1409 aa25.21■■□□□ 1.63
SRRT-209ENST00000474896 ZMYM3Q14202 1370 aa25.21■■□□□ 1.63
SRRT-209ENST00000474896 PTPRTO14522 1441 aa25.2■■□□□ 1.63
SRRT-209ENST00000474896 MTUS2Q5JR59 1369 aa25.2■■□□□ 1.63
SRRT-209ENST00000474896 SUPT6HQ7KZ85 1726 aaKnown RBP25.19■■□□□ 1.62
SRRT-209ENST00000474896 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
SRRT-209ENST00000474896 GGT6Q6P531 493 aa25.16■■□□□ 1.62
SRRT-209ENST00000474896 ATP7AQ04656 1500 aa25.16■■□□□ 1.62
SRRT-209ENST00000474896 ZNF644Q9H582 1327 aaPredicted RBP25.15■■□□□ 1.62
SRRT-209ENST00000474896 A2MP01023 1474 aa25.15■■□□□ 1.62
SRRT-209ENST00000474896 NPATQ14207 1427 aa25.14■■□□□ 1.62
SRRT-209ENST00000474896 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
SRRT-209ENST00000474896 MROH2AA6NES4 1674 aa25.12■■□□□ 1.61
SRRT-209ENST00000474896 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
SRRT-209ENST00000474896 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
SRRT-209ENST00000474896 CLTCQ00610 1675 aaKnown RBP25.08■■□□□ 1.61
SRRT-209ENST00000474896 PLXNC1O60486 1568 aa25.08■■□□□ 1.61
SRRT-209ENST00000474896 CAMSAP1Q5T5Y3 1602 aa25.08■■□□□ 1.6
SRRT-209ENST00000474896 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
SRRT-209ENST00000474896 LTBP4Q8N2S1 1624 aa25.05■■□□□ 1.6
SRRT-209ENST00000474896 TIAM1Q13009 1591 aa25.05■■□□□ 1.6
SRRT-209ENST00000474896 MBD5Q9P267 1494 aa25.04■■□□□ 1.6
SRRT-209ENST00000474896 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
SRRT-209ENST00000474896 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
SRRT-209ENST00000474896 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
SRRT-209ENST00000474896 ADGBQ8N7X0 1667 aa25.01■■□□□ 1.59
SRRT-209ENST00000474896 RTEL1-TNFRSF6BF6WH68 1400 aa25.01■■□□□ 1.59
SRRT-209ENST00000474896 PKD2Q13563 968 aa25■■□□□ 1.59
SRRT-209ENST00000474896 DHX29Q7Z478 1369 aaKnown RBP24.99■■□□□ 1.59
SRRT-209ENST00000474896 DISP3Q9P2K9 1392 aa24.99■■□□□ 1.59
SRRT-209ENST00000474896 ZNF335Q9H4Z2 1342 aaPredicted RBP24.97■■□□□ 1.59
SRRT-209ENST00000474896 KIF3BO15066 747 aa24.96■■□□□ 1.59
SRRT-209ENST00000474896 MYO3AQ8NEV4 1616 aa24.96■■□□□ 1.59
SRRT-209ENST00000474896 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.58
SRRT-209ENST00000474896 IQSEC2Q5JU85 1478 aa24.95■■□□□ 1.58
SRRT-209ENST00000474896 CEP170BQ9Y4F5 1589 aaPredicted RBP24.94■■□□□ 1.58
SRRT-209ENST00000474896 PLA2R1Q13018 1463 aa24.93■■□□□ 1.58
SRRT-209ENST00000474896 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
SRRT-209ENST00000474896 NCOA2Q15596 1464 aa24.92■■□□□ 1.58
SRRT-209ENST00000474896 FBXO31Q5XUX0 539 aaPredicted RBP24.92■■□□□ 1.58
SRRT-209ENST00000474896 ILDR2Q71H61 639 aa24.92■■□□□ 1.58
SRRT-209ENST00000474896 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
SRRT-209ENST00000474896 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.58
SRRT-209ENST00000474896 CAMSAP2Q08AD1 1489 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms