RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 ADAMTSL3P82987 1691 aa22.59■■□□□ 1.21
DNMT3A-211ENST00000474887 ZFYVE16Q7Z3T8 1539 aa22.59■■□□□ 1.21
DNMT3A-211ENST00000474887 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
DNMT3A-211ENST00000474887 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
DNMT3A-211ENST00000474887 PTPRMP28827 1452 aa22.57■■□□□ 1.2
DNMT3A-211ENST00000474887 ZNF518AQ6AHZ1 1483 aa22.57■■□□□ 1.2
DNMT3A-211ENST00000474887 BCORL1Q5H9F3 1711 aa22.54■■□□□ 1.2
DNMT3A-211ENST00000474887 YEATS2Q9ULM3 1422 aa22.54■■□□□ 1.2
DNMT3A-211ENST00000474887 LRRIQ1Q96JM4 1722 aa22.54■■□□□ 1.2
DNMT3A-211ENST00000474887 ATP10AO60312 1499 aa22.54■■□□□ 1.2
DNMT3A-211ENST00000474887 AFAP1Q8N556 730 aa22.51■■□□□ 1.19
DNMT3A-211ENST00000474887 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
DNMT3A-211ENST00000474887 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
DNMT3A-211ENST00000474887 MLH3Q9UHC1 1453 aa22.47■■□□□ 1.19
DNMT3A-211ENST00000474887 KDM5CP41229 1560 aa22.46■■□□□ 1.19
DNMT3A-211ENST00000474887 PREX2Q70Z35 1606 aa22.46■■□□□ 1.19
DNMT3A-211ENST00000474887 MYT1LQ9UL68 1186 aa22.45■■□□□ 1.18
DNMT3A-211ENST00000474887 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
DNMT3A-211ENST00000474887 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
DNMT3A-211ENST00000474887 MADDQ8WXG6 1647 aa22.45■■□□□ 1.18
DNMT3A-211ENST00000474887 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
DNMT3A-211ENST00000474887 GPATCH8Q9UKJ3 1502 aaKnown RBP22.42■■□□□ 1.18
DNMT3A-211ENST00000474887 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
DNMT3A-211ENST00000474887 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
DNMT3A-211ENST00000474887 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
DNMT3A-211ENST00000474887 CFDP1Q9UEE9 299 aaPredicted RBP22.41■■□□□ 1.18
DNMT3A-211ENST00000474887 ABCC1P33527 1531 aa22.41■■□□□ 1.18
DNMT3A-211ENST00000474887 REREQ9P2R6 1566 aa22.39■■□□□ 1.18
DNMT3A-211ENST00000474887 MLECQ14165 292 aa22.39■■□□□ 1.17
DNMT3A-211ENST00000474887 TRAPPC8Q9Y2L5 1435 aa22.39■■□□□ 1.17
DNMT3A-211ENST00000474887 ARHGEF12Q9NZN5 1544 aa22.37■■□□□ 1.17
DNMT3A-211ENST00000474887 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
DNMT3A-211ENST00000474887 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
DNMT3A-211ENST00000474887 RIMS1Q86UR5 1692 aaKnown RBP22.34■■□□□ 1.17
DNMT3A-211ENST00000474887 AGLP35573 1532 aa22.34■■□□□ 1.17
DNMT3A-211ENST00000474887 SPAG9O60271 1321 aaKnown RBP22.33■■□□□ 1.17
DNMT3A-211ENST00000474887 EHBP1L1Q8N3D4 1523 aa22.32■■□□□ 1.16
DNMT3A-211ENST00000474887 DIP2CQ9Y2E4 1556 aa22.32■■□□□ 1.16
DNMT3A-211ENST00000474887 ITSN2Q9NZM3 1697 aa22.32■■□□□ 1.16
DNMT3A-211ENST00000474887 HNRNPMP52272 730 aaKnown RBP eCLIP22.31■■□□□ 1.16
DNMT3A-211ENST00000474887 SIGLEC1Q9BZZ2 1709 aa22.31■■□□□ 1.16
DNMT3A-211ENST00000474887 ESF1Q9H501 851 aaKnown RBP22.3■■□□□ 1.16
DNMT3A-211ENST00000474887 LMTK3Q96Q04 1460 aa22.29■■□□□ 1.16
DNMT3A-211ENST00000474887 SAMD9LQ8IVG5 1584 aa22.29■■□□□ 1.16
DNMT3A-211ENST00000474887 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
DNMT3A-211ENST00000474887 RSPH4AQ5TD94 716 aa22.28■■□□□ 1.16
DNMT3A-211ENST00000474887 FER1L4A9Z1Z3 1794 aa22.27■■□□□ 1.16
DNMT3A-211ENST00000474887 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
DNMT3A-211ENST00000474887 ABCA6Q8N139 1617 aa22.25■■□□□ 1.15
DNMT3A-211ENST00000474887 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
DNMT3A-211ENST00000474887 CNTLNQ9NXG0 1405 aa22.24■■□□□ 1.15
DNMT3A-211ENST00000474887 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
DNMT3A-211ENST00000474887 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
DNMT3A-211ENST00000474887 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
DNMT3A-211ENST00000474887 SETD1BQ9UPS6 1966 aaKnown RBP22.2■■□□□ 1.14
DNMT3A-211ENST00000474887 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
DNMT3A-211ENST00000474887 MAP3K1Q13233 1512 aa22.2■■□□□ 1.14
DNMT3A-211ENST00000474887 TIAM1Q13009 1591 aa22.2■■□□□ 1.14
DNMT3A-211ENST00000474887 ATP7AQ04656 1500 aa22.19■■□□□ 1.14
DNMT3A-211ENST00000474887 NCOA2Q15596 1464 aa22.18■■□□□ 1.14
DNMT3A-211ENST00000474887 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
DNMT3A-211ENST00000474887 CEBPAP49715 358 aaPredicted RBP22.18■■□□□ 1.14
DNMT3A-211ENST00000474887 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
DNMT3A-211ENST00000474887 ZNF644Q9H582 1327 aaPredicted RBP22.17■■□□□ 1.14
DNMT3A-211ENST00000474887 A2MP01023 1474 aa22.16■■□□□ 1.14
DNMT3A-211ENST00000474887 HSPA2P54652 639 aa22.16■■□□□ 1.14
DNMT3A-211ENST00000474887 SUPT6HQ7KZ85 1726 aaKnown RBP22.16■■□□□ 1.14
DNMT3A-211ENST00000474887 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
DNMT3A-211ENST00000474887 INO80Q9ULG1 1556 aaPredicted RBP22.14■■□□□ 1.13
DNMT3A-211ENST00000474887 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.13
DNMT3A-211ENST00000474887 UHRF1BP1Q6BDS2 1440 aa22.14■■□□□ 1.13
DNMT3A-211ENST00000474887 TSPY4P0CV99 314 aa22.11■■□□□ 1.13
DNMT3A-211ENST00000474887 TSPY10P0CW01 314 aa22.11■■□□□ 1.13
DNMT3A-211ENST00000474887 PREX1Q8TCU6 1659 aa22.11■■□□□ 1.13
DNMT3A-211ENST00000474887 PLXNC1O60486 1568 aa22.1■■□□□ 1.13
DNMT3A-211ENST00000474887 APLP2Q06481 763 aa22.1■■□□□ 1.13
DNMT3A-211ENST00000474887 NPATQ14207 1427 aa22.1■■□□□ 1.13
DNMT3A-211ENST00000474887 DHX29Q7Z478 1369 aaKnown RBP22.1■■□□□ 1.13
DNMT3A-211ENST00000474887 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
DNMT3A-211ENST00000474887 ZMYM3Q14202 1370 aa22.09■■□□□ 1.13
DNMT3A-211ENST00000474887 FBXO41Q8TF61 875 aa22.07■■□□□ 1.12
DNMT3A-211ENST00000474887 CAMSAP2Q08AD1 1489 aa22.07■■□□□ 1.12
DNMT3A-211ENST00000474887 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
DNMT3A-211ENST00000474887 GGT6Q6P531 493 aa22.06■■□□□ 1.12
DNMT3A-211ENST00000474887 ADGBQ8N7X0 1667 aa22.06■■□□□ 1.12
DNMT3A-211ENST00000474887 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
DNMT3A-211ENST00000474887 C3P01024 1663 aa22.04■■□□□ 1.12
DNMT3A-211ENST00000474887 ARHGEF5Q12774 1597 aa22.04■■□□□ 1.12
DNMT3A-211ENST00000474887 KANK4Q5T7N3 995 aaPredicted RBP22.03■■□□□ 1.12
DNMT3A-211ENST00000474887 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
DNMT3A-211ENST00000474887 KIF3BO15066 747 aa21.99■■□□□ 1.11
DNMT3A-211ENST00000474887 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
DNMT3A-211ENST00000474887 PTPRTO14522 1441 aa21.96■■□□□ 1.11
DNMT3A-211ENST00000474887 PTPRKQ15262 1439 aa21.95■■□□□ 1.1
DNMT3A-211ENST00000474887 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
DNMT3A-211ENST00000474887 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
DNMT3A-211ENST00000474887 MAST1Q9Y2H9 1570 aa21.91■■□□□ 1.1
DNMT3A-211ENST00000474887 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
DNMT3A-211ENST00000474887 NCOA1Q15788 1441 aa21.89■■□□□ 1.1
DNMT3A-211ENST00000474887 PKD2Q13563 968 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms