RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
LSAMP-203ENST00000474851 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
LSAMP-203ENST00000474851 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
LSAMP-203ENST00000474851 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
LSAMP-203ENST00000474851 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
LSAMP-203ENST00000474851 FRMPD1Q5SYB0 1578 aa11.46□□□□□ -0.57
LSAMP-203ENST00000474851 POGZQ7Z3K3 1410 aa11.46□□□□□ -0.57
LSAMP-203ENST00000474851 YEATS2Q9ULM3 1422 aa11.46□□□□□ -0.57
LSAMP-203ENST00000474851 KIF14Q15058 1648 aa11.46□□□□□ -0.58
LSAMP-203ENST00000474851 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
LSAMP-203ENST00000474851 ARID4BQ4LE39 1312 aaPredicted RBP11.44□□□□□ -0.58
LSAMP-203ENST00000474851 MAGI2Q86UL8 1455 aa11.44□□□□□ -0.58
LSAMP-203ENST00000474851 MTUS2Q5JR59 1369 aa11.43□□□□□ -0.58
LSAMP-203ENST00000474851 CFDP1Q9UEE9 299 aaPredicted RBP11.43□□□□□ -0.58
LSAMP-203ENST00000474851 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
LSAMP-203ENST00000474851 TRAPPC8Q9Y2L5 1435 aa11.43□□□□□ -0.58
LSAMP-203ENST00000474851 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.58
LSAMP-203ENST00000474851 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
LSAMP-203ENST00000474851 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
LSAMP-203ENST00000474851 ARHGAP5Q13017 1502 aa11.41□□□□□ -0.58
LSAMP-203ENST00000474851 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
LSAMP-203ENST00000474851 VPS8Q8N3P4 1428 aa11.41□□□□□ -0.58
LSAMP-203ENST00000474851 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
LSAMP-203ENST00000474851 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.58
LSAMP-203ENST00000474851 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
LSAMP-203ENST00000474851 ATP10AO60312 1499 aa11.39□□□□□ -0.59
LSAMP-203ENST00000474851 ZNF518AQ6AHZ1 1483 aa11.39□□□□□ -0.59
LSAMP-203ENST00000474851 KIAA1107Q9UPP5 1409 aa11.39□□□□□ -0.59
LSAMP-203ENST00000474851 CACNB1Q02641 598 aaPredicted RBP11.38□□□□□ -0.59
LSAMP-203ENST00000474851 MLECQ14165 292 aa11.38□□□□□ -0.59
LSAMP-203ENST00000474851 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
LSAMP-203ENST00000474851 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
LSAMP-203ENST00000474851 ZFYVE16Q7Z3T8 1539 aa11.37□□□□□ -0.59
LSAMP-203ENST00000474851 ARHGEF40Q8TER5 1519 aa11.36□□□□□ -0.59
LSAMP-203ENST00000474851 MYT1LQ9UL68 1186 aa11.36□□□□□ -0.59
LSAMP-203ENST00000474851 PTPRMP28827 1452 aa11.36□□□□□ -0.59
LSAMP-203ENST00000474851 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
LSAMP-203ENST00000474851 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
LSAMP-203ENST00000474851 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
LSAMP-203ENST00000474851 KDM5CP41229 1560 aa11.34□□□□□ -0.59
LSAMP-203ENST00000474851 ABCC1P33527 1531 aa11.34□□□□□ -0.59
LSAMP-203ENST00000474851 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
LSAMP-203ENST00000474851 LRRC9Q6ZRR7 1453 aa11.33□□□□□ -0.6
LSAMP-203ENST00000474851 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
LSAMP-203ENST00000474851 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
LSAMP-203ENST00000474851 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
LSAMP-203ENST00000474851 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
LSAMP-203ENST00000474851 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
LSAMP-203ENST00000474851 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
LSAMP-203ENST00000474851 MYO5CQ9NQX4 1742 aa11.31□□□□□ -0.6
LSAMP-203ENST00000474851 CDC42BPBQ9Y5S2 1711 aa11.31□□□□□ -0.6
LSAMP-203ENST00000474851 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
LSAMP-203ENST00000474851 SAMD9LQ8IVG5 1584 aa11.3□□□□□ -0.6
LSAMP-203ENST00000474851 CEBPAP49715 358 aaPredicted RBP11.3□□□□□ -0.6
LSAMP-203ENST00000474851 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
LSAMP-203ENST00000474851 SYCP2Q9BX26 1530 aa11.29□□□□□ -0.6
LSAMP-203ENST00000474851 APLP2Q06481 763 aa11.28□□□□□ -0.6
LSAMP-203ENST00000474851 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
LSAMP-203ENST00000474851 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
LSAMP-203ENST00000474851 DIP2CQ9Y2E4 1556 aa11.27□□□□□ -0.61
LSAMP-203ENST00000474851 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
LSAMP-203ENST00000474851 AGLP35573 1532 aa11.26□□□□□ -0.61
LSAMP-203ENST00000474851 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
LSAMP-203ENST00000474851 HECW2Q9P2P5 1572 aa11.25□□□□□ -0.61
LSAMP-203ENST00000474851 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
LSAMP-203ENST00000474851 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
LSAMP-203ENST00000474851 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
LSAMP-203ENST00000474851 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
LSAMP-203ENST00000474851 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
LSAMP-203ENST00000474851 HSPA2P54652 639 aa11.24□□□□□ -0.61
LSAMP-203ENST00000474851 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
LSAMP-203ENST00000474851 KCNA4P22459 653 aa11.23□□□□□ -0.61
LSAMP-203ENST00000474851 GGT6Q6P531 493 aa11.23□□□□□ -0.61
LSAMP-203ENST00000474851 MYOM3Q5VTT5 1437 aa11.23□□□□□ -0.61
LSAMP-203ENST00000474851 A2MP01023 1474 aa11.23□□□□□ -0.61
LSAMP-203ENST00000474851 CAMSAP2Q08AD1 1489 aa11.22□□□□□ -0.61
LSAMP-203ENST00000474851 ZMYM3Q14202 1370 aa11.22□□□□□ -0.61
LSAMP-203ENST00000474851 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
LSAMP-203ENST00000474851 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
LSAMP-203ENST00000474851 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
LSAMP-203ENST00000474851 SCAF1Q9H7N4 1312 aaKnown RBP11.22□□□□□ -0.61
LSAMP-203ENST00000474851 KIDINS220Q9ULH0 1771 aa11.22□□□□□ -0.61
LSAMP-203ENST00000474851 ITSN2Q9NZM3 1697 aa11.21□□□□□ -0.61
LSAMP-203ENST00000474851 ATP7AQ04656 1500 aa11.21□□□□□ -0.61
LSAMP-203ENST00000474851 CCDC141Q6ZP82 1450 aa11.21□□□□□ -0.61
LSAMP-203ENST00000474851 KIF3BO15066 747 aa11.2□□□□□ -0.62
LSAMP-203ENST00000474851 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
LSAMP-203ENST00000474851 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
LSAMP-203ENST00000474851 ABCC5O15440 1437 aa11.18□□□□□ -0.62
LSAMP-203ENST00000474851 PLXNC1O60486 1568 aa11.17□□□□□ -0.62
LSAMP-203ENST00000474851 INO80Q9ULG1 1556 aaPredicted RBP11.17□□□□□ -0.62
LSAMP-203ENST00000474851 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
LSAMP-203ENST00000474851 FGD6Q6ZV73 1430 aa11.16□□□□□ -0.62
LSAMP-203ENST00000474851 ARHGEF5Q12774 1597 aa11.16□□□□□ -0.62
LSAMP-203ENST00000474851 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
LSAMP-203ENST00000474851 WASHC2CQ9Y4E1 1318 aa11.14□□□□□ -0.63
LSAMP-203ENST00000474851 FBXO31Q5XUX0 539 aaPredicted RBP11.14□□□□□ -0.63
LSAMP-203ENST00000474851 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
LSAMP-203ENST00000474851 NPATQ14207 1427 aa11.13□□□□□ -0.63
LSAMP-203ENST00000474851 PTPRKQ15262 1439 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms