RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-209ENST00000474647 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
CCDC78-209ENST00000474647 MAGI2Q86UL8 1455 aa23.26■■□□□ 1.31
CCDC78-209ENST00000474647 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
CCDC78-209ENST00000474647 PLCH2O75038 1416 aa23.25■■□□□ 1.31
CCDC78-209ENST00000474647 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
CCDC78-209ENST00000474647 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
CCDC78-209ENST00000474647 FBXO41Q8TF61 875 aa23.23■■□□□ 1.31
CCDC78-209ENST00000474647 MLECQ14165 292 aa23.21■■□□□ 1.31
CCDC78-209ENST00000474647 CDC42BPBQ9Y5S2 1711 aa23.2■■□□□ 1.3
CCDC78-209ENST00000474647 PREX1Q8TCU6 1659 aa23.2■■□□□ 1.3
CCDC78-209ENST00000474647 ARHGAP5Q13017 1502 aa23.19■■□□□ 1.3
CCDC78-209ENST00000474647 HSPA2P54652 639 aa23.17■■□□□ 1.3
CCDC78-209ENST00000474647 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
CCDC78-209ENST00000474647 ATP10AO60312 1499 aa23.15■■□□□ 1.3
CCDC78-209ENST00000474647 ARHGEF12Q9NZN5 1544 aa23.14■■□□□ 1.3
CCDC78-209ENST00000474647 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
CCDC78-209ENST00000474647 CLIP1P30622 1438 aa23.14■■□□□ 1.29
CCDC78-209ENST00000474647 ZNF518AQ6AHZ1 1483 aa23.13■■□□□ 1.29
CCDC78-209ENST00000474647 PREX2Q70Z35 1606 aa23.13■■□□□ 1.29
CCDC78-209ENST00000474647 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
CCDC78-209ENST00000474647 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
CCDC78-209ENST00000474647 KDM5CP41229 1560 aa23.13■■□□□ 1.29
CCDC78-209ENST00000474647 ITSN2Q9NZM3 1697 aa23.12■■□□□ 1.29
CCDC78-209ENST00000474647 DIP2CQ9Y2E4 1556 aa23.1■■□□□ 1.29
CCDC78-209ENST00000474647 ABCA6Q8N139 1617 aa23.1■■□□□ 1.29
CCDC78-209ENST00000474647 CDC42BPAQ5VT25 1732 aa23.1■■□□□ 1.29
CCDC78-209ENST00000474647 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
CCDC78-209ENST00000474647 C3P01024 1663 aa23.05■■□□□ 1.28
CCDC78-209ENST00000474647 ABCC1P33527 1531 aa23.04■■□□□ 1.28
CCDC78-209ENST00000474647 SETD1BQ9UPS6 1966 aaKnown RBP23.04■■□□□ 1.28
CCDC78-209ENST00000474647 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
CCDC78-209ENST00000474647 CCDC18Q5T9S5 1454 aa23.04■■□□□ 1.28
CCDC78-209ENST00000474647 STRCQ7RTU9 1775 aa23.03■■□□□ 1.28
CCDC78-209ENST00000474647 REREQ9P2R6 1566 aa23.02■■□□□ 1.28
CCDC78-209ENST00000474647 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
CCDC78-209ENST00000474647 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
CCDC78-209ENST00000474647 CEBPAP49715 358 aaPredicted RBP22.99■■□□□ 1.27
CCDC78-209ENST00000474647 CASKIN1Q8WXD9 1431 aa22.98■■□□□ 1.27
CCDC78-209ENST00000474647 MLH3Q9UHC1 1453 aa22.96■■□□□ 1.27
CCDC78-209ENST00000474647 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
CCDC78-209ENST00000474647 TRAPPC8Q9Y2L5 1435 aa22.94■■□□□ 1.26
CCDC78-209ENST00000474647 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
CCDC78-209ENST00000474647 SUPT6HQ7KZ85 1726 aaKnown RBP22.93■■□□□ 1.26
CCDC78-209ENST00000474647 CERKQ8TCT0 537 aa22.92■■□□□ 1.26
CCDC78-209ENST00000474647 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
CCDC78-209ENST00000474647 AGLP35573 1532 aa22.91■■□□□ 1.26
CCDC78-209ENST00000474647 SYCP2Q9BX26 1530 aa22.88■■□□□ 1.25
CCDC78-209ENST00000474647 MROH2AA6NES4 1674 aa22.87■■□□□ 1.25
CCDC78-209ENST00000474647 ESF1Q9H501 851 aaKnown RBP22.87■■□□□ 1.25
CCDC78-209ENST00000474647 CLTCQ00610 1675 aaKnown RBP22.84■■□□□ 1.25
CCDC78-209ENST00000474647 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
CCDC78-209ENST00000474647 INO80Q9ULG1 1556 aaPredicted RBP22.8■■□□□ 1.24
CCDC78-209ENST00000474647 DMRT2Q9Y5R5 561 aa22.8■■□□□ 1.24
CCDC78-209ENST00000474647 ATP7AQ04656 1500 aa22.8■■□□□ 1.24
CCDC78-209ENST00000474647 CNTLNQ9NXG0 1405 aa22.79■■□□□ 1.24
CCDC78-209ENST00000474647 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
CCDC78-209ENST00000474647 ADGBQ8N7X0 1667 aa22.77■■□□□ 1.24
CCDC78-209ENST00000474647 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
CCDC78-209ENST00000474647 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
CCDC78-209ENST00000474647 SPAG9O60271 1321 aaKnown RBP22.74■■□□□ 1.23
CCDC78-209ENST00000474647 CAMSAP1Q5T5Y3 1602 aa22.74■■□□□ 1.23
CCDC78-209ENST00000474647 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
CCDC78-209ENST00000474647 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCDC78-209ENST00000474647 PTPRTO14522 1441 aa22.73■■□□□ 1.23
CCDC78-209ENST00000474647 PLEKHH2Q8IVE3 1493 aa22.72■■□□□ 1.23
CCDC78-209ENST00000474647 CCNB3Q8WWL7 1395 aa22.71■■□□□ 1.23
CCDC78-209ENST00000474647 TIAM1Q13009 1591 aa22.71■■□□□ 1.23
CCDC78-209ENST00000474647 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
CCDC78-209ENST00000474647 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
CCDC78-209ENST00000474647 A2MP01023 1474 aa22.68■■□□□ 1.22
CCDC78-209ENST00000474647 NPATQ14207 1427 aa22.68■■□□□ 1.22
CCDC78-209ENST00000474647 CFDP1Q9UEE9 299 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-209ENST00000474647 LTBP4Q8N2S1 1624 aa22.68■■□□□ 1.22
CCDC78-209ENST00000474647 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
CCDC78-209ENST00000474647 KIAA1107Q9UPP5 1409 aa22.67■■□□□ 1.22
CCDC78-209ENST00000474647 ZMYM3Q14202 1370 aa22.65■■□□□ 1.22
CCDC78-209ENST00000474647 CEP170BQ9Y4F5 1589 aaPredicted RBP22.65■■□□□ 1.22
CCDC78-209ENST00000474647 SPATA31D1Q6ZQQ2 1576 aa22.61■■□□□ 1.21
CCDC78-209ENST00000474647 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
CCDC78-209ENST00000474647 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
CCDC78-209ENST00000474647 GGT6Q6P531 493 aa22.59■■□□□ 1.21
CCDC78-209ENST00000474647 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
CCDC78-209ENST00000474647 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
CCDC78-209ENST00000474647 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-209ENST00000474647 NCKAP5LQ9HCH0 1330 aa22.55■■□□□ 1.2
CCDC78-209ENST00000474647 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
CCDC78-209ENST00000474647 MBD5Q9P267 1494 aa22.54■■□□□ 1.2
CCDC78-209ENST00000474647 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
CCDC78-209ENST00000474647 DNMT1P26358 1616 aaKnown RBP22.53■■□□□ 1.2
CCDC78-209ENST00000474647 CAMSAP2Q08AD1 1489 aa22.51■■□□□ 1.19
CCDC78-209ENST00000474647 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
CCDC78-209ENST00000474647 ZNF335Q9H4Z2 1342 aaPredicted RBP22.5■■□□□ 1.19
CCDC78-209ENST00000474647 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
CCDC78-209ENST00000474647 RTEL1-TNFRSF6BF6WH68 1400 aa22.48■■□□□ 1.19
CCDC78-209ENST00000474647 A2ML1A8K2U0 1454 aa22.47■■□□□ 1.19
CCDC78-209ENST00000474647 NCOA2Q15596 1464 aa22.47■■□□□ 1.19
CCDC78-209ENST00000474647 KDM5DQ9BY66 1539 aa22.47■■□□□ 1.19
CCDC78-209ENST00000474647 PKD2Q13563 968 aa22.46■■□□□ 1.19
CCDC78-209ENST00000474647 ILDR2Q71H61 639 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms