RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 TIAM1Q13009 1591 aa6.48□□□□□ -1.37
GAPVD1-216ENST00000474637 MTUS2Q5JR59 1369 aa6.48□□□□□ -1.37
GAPVD1-216ENST00000474637 MYO5CQ9NQX4 1742 aa6.48□□□□□ -1.37
GAPVD1-216ENST00000474637 PLCH2O75038 1416 aa6.47□□□□□ -1.37
GAPVD1-216ENST00000474637 PIAS4Q8N2W9 510 aaPredicted RBP6.47□□□□□ -1.37
GAPVD1-216ENST00000474637 APLP2Q06481 763 aa6.46□□□□□ -1.37
GAPVD1-216ENST00000474637 SUPT6HQ7KZ85 1726 aaKnown RBP6.45□□□□□ -1.38
GAPVD1-216ENST00000474637 FANCAO15360 1455 aa6.45□□□□□ -1.38
GAPVD1-216ENST00000474637 PREX2Q70Z35 1606 aa6.45□□□□□ -1.38
GAPVD1-216ENST00000474637 EFCAB2Q5VUJ9 269 aa6.45□□□□□ -1.38
GAPVD1-216ENST00000474637 AKNAQ7Z591 1439 aa6.45□□□□□ -1.38
GAPVD1-216ENST00000474637 CCNB3Q8WWL7 1395 aa6.44□□□□□ -1.38
GAPVD1-216ENST00000474637 LRRC9Q6ZRR7 1453 aa6.44□□□□□ -1.38
GAPVD1-216ENST00000474637 ARHGAP5Q13017 1502 aa6.44□□□□□ -1.38
GAPVD1-216ENST00000474637 ITSN2Q9NZM3 1697 aa6.44□□□□□ -1.38
GAPVD1-216ENST00000474637 CDC42BPAQ5VT25 1732 aa6.43□□□□□ -1.38
GAPVD1-216ENST00000474637 CDC42BPBQ9Y5S2 1711 aa6.43□□□□□ -1.38
GAPVD1-216ENST00000474637 GPATCH8Q9UKJ3 1502 aaKnown RBP6.43□□□□□ -1.38
GAPVD1-216ENST00000474637 DENND4BO75064 1496 aaPredicted RBP6.43□□□□□ -1.38
GAPVD1-216ENST00000474637 ADGRL1O94910 1474 aa6.42□□□□□ -1.38
GAPVD1-216ENST00000474637 PLEKHH2Q8IVE3 1493 aa6.42□□□□□ -1.38
GAPVD1-216ENST00000474637 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-216ENST00000474637 NCOA2Q15596 1464 aa6.42□□□□□ -1.38
GAPVD1-216ENST00000474637 CFDP1Q9UEE9 299 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-216ENST00000474637 SCAPERQ9BY12 1400 aa6.41□□□□□ -1.38
GAPVD1-216ENST00000474637 RICTORQ6R327 1708 aa6.4□□□□□ -1.38
GAPVD1-216ENST00000474637 ABCC1P33527 1531 aa6.4□□□□□ -1.38
GAPVD1-216ENST00000474637 POGZQ7Z3K3 1410 aa6.4□□□□□ -1.38
GAPVD1-216ENST00000474637 FRMPD1Q5SYB0 1578 aa6.4□□□□□ -1.38
GAPVD1-216ENST00000474637 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.38
GAPVD1-216ENST00000474637 MAGI2Q86UL8 1455 aa6.4□□□□□ -1.39
GAPVD1-216ENST00000474637 PELP1Q8IZL8 1130 aaKnown RBP6.4□□□□□ -1.39
GAPVD1-216ENST00000474637 KIAA1107Q9UPP5 1409 aa6.4□□□□□ -1.39
GAPVD1-216ENST00000474637 ZNF518AQ6AHZ1 1483 aa6.39□□□□□ -1.39
GAPVD1-216ENST00000474637 KANK4Q5T7N3 995 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-216ENST00000474637 SAMD9LQ8IVG5 1584 aa6.39□□□□□ -1.39
GAPVD1-216ENST00000474637 MIA2Q96PC5 1412 aa6.39□□□□□ -1.39
GAPVD1-216ENST00000474637 MYOM3Q5VTT5 1437 aa6.38□□□□□ -1.39
GAPVD1-216ENST00000474637 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
GAPVD1-216ENST00000474637 KDM5CP41229 1560 aa6.38□□□□□ -1.39
GAPVD1-216ENST00000474637 ZNF777Q9ULD5 760 aaPredicted RBP6.38□□□□□ -1.39
GAPVD1-216ENST00000474637 ZFYVE16Q7Z3T8 1539 aa6.37□□□□□ -1.39
GAPVD1-216ENST00000474637 ARHGEF40Q8TER5 1519 aa6.37□□□□□ -1.39
GAPVD1-216ENST00000474637 RSPH4AQ5TD94 716 aa6.37□□□□□ -1.39
GAPVD1-216ENST00000474637 SYCP2Q9BX26 1530 aa6.37□□□□□ -1.39
GAPVD1-216ENST00000474637 HECW2Q9P2P5 1572 aa6.37□□□□□ -1.39
GAPVD1-216ENST00000474637 CAMSAP2Q08AD1 1489 aa6.36□□□□□ -1.39
GAPVD1-216ENST00000474637 MLH3Q9UHC1 1453 aa6.36□□□□□ -1.39
GAPVD1-216ENST00000474637 ARHGEF12Q9NZN5 1544 aa6.36□□□□□ -1.39
GAPVD1-216ENST00000474637 TRAPPC8Q9Y2L5 1435 aa6.36□□□□□ -1.39
GAPVD1-216ENST00000474637 ARHGEF5Q12774 1597 aa6.36□□□□□ -1.39
GAPVD1-216ENST00000474637 HNRNPMP52272 730 aaKnown RBP eCLIP6.35□□□□□ -1.39
GAPVD1-216ENST00000474637 AFAP1Q8N556 730 aa6.35□□□□□ -1.39
GAPVD1-216ENST00000474637 PTPN23Q9H3S7 1636 aa6.35□□□□□ -1.39
GAPVD1-216ENST00000474637 ATP10AO60312 1499 aa6.35□□□□□ -1.39
GAPVD1-216ENST00000474637 CCDC141Q6ZP82 1450 aa6.35□□□□□ -1.39
GAPVD1-216ENST00000474637 RTEL1-TNFRSF6BF6WH68 1400 aa6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 C9orf84Q5VXU9 1444 aa6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 FGD6Q6ZV73 1430 aa6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 MYT1LQ9UL68 1186 aa6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 TCOF1Q13428 1488 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 MBD5Q9P267 1494 aa6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 SPAG9O60271 1321 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 REREQ9P2R6 1566 aa6.34□□□□□ -1.39
GAPVD1-216ENST00000474637 INO80Q9ULG1 1556 aaPredicted RBP6.34□□□□□ -1.4
GAPVD1-216ENST00000474637 ATP7AQ04656 1500 aa6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 DIP2CQ9Y2E4 1556 aa6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 ZNF644Q9H582 1327 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 YEATS2Q9ULM3 1422 aa6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 KIDINS220Q9ULH0 1771 aa6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 MAST1Q9Y2H9 1570 aa6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 ZEB1P37275 1124 aaPredicted RBP6.33□□□□□ -1.4
GAPVD1-216ENST00000474637 ABCA6Q8N139 1617 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 ADGBQ8N7X0 1667 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 TSPY4P0CV99 314 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 TSPY10P0CW01 314 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 SHANK2Q9UPX8 1470 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 AGLP35573 1532 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 CROCC2H7BZ55 1655 aa6.32□□□□□ -1.4
GAPVD1-216ENST00000474637 ARID4BQ4LE39 1312 aaPredicted RBP6.31□□□□□ -1.4
GAPVD1-216ENST00000474637 DNMT1P26358 1616 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-216ENST00000474637 BCORL1Q5H9F3 1711 aa6.31□□□□□ -1.4
GAPVD1-216ENST00000474637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
GAPVD1-216ENST00000474637 PLXNC1O60486 1568 aa6.3□□□□□ -1.4
GAPVD1-216ENST00000474637 A2MP01023 1474 aa6.3□□□□□ -1.4
GAPVD1-216ENST00000474637 ADAMTSL3P82987 1691 aa6.3□□□□□ -1.4
GAPVD1-216ENST00000474637 DAPK1P53355 1430 aa6.29□□□□□ -1.4
GAPVD1-216ENST00000474637 ABCC5O15440 1437 aa6.29□□□□□ -1.4
GAPVD1-216ENST00000474637 FAM50AQ14320 339 aaKnown RBP6.29□□□□□ -1.4
GAPVD1-216ENST00000474637 DHX29Q7Z478 1369 aaKnown RBP6.28□□□□□ -1.4
GAPVD1-216ENST00000474637 KDM4FA0A1W2PPD8 638 aa6.28□□□□□ -1.4
GAPVD1-216ENST00000474637 SIGLEC1Q9BZZ2 1709 aa6.28□□□□□ -1.4
GAPVD1-216ENST00000474637 RRBP1Q9P2E9 1410 aaKnown RBP6.28□□□□□ -1.4
GAPVD1-216ENST00000474637 ANKRD30AQ9BXX3 1397 aa6.27□□□□□ -1.41
GAPVD1-216ENST00000474637 DUOX2Q9NRD8 1548 aa6.27□□□□□ -1.41
GAPVD1-216ENST00000474637 SCAF1Q9H7N4 1312 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-216ENST00000474637 ADGRL2O95490 1459 aa6.27□□□□□ -1.41
GAPVD1-216ENST00000474637 EIF2AK4Q9P2K8 1649 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-216ENST00000474637 FER1L4A9Z1Z3 1794 aa6.27□□□□□ -1.41
GAPVD1-216ENST00000474637 FAM135AQ9P2D6 1515 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms