RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ABCA9Q8IUA7 1624 aa15.58■□□□□ 0.09
COL12A1-206ENST00000474564 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.08
COL12A1-206ENST00000474564 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
COL12A1-206ENST00000474564 ITGAEP38570 1179 aa15.57■□□□□ 0.08
COL12A1-206ENST00000474564 GLI2P10070 1586 aa15.57■□□□□ 0.08
COL12A1-206ENST00000474564 TSPY4P0CV99 314 aa15.56■□□□□ 0.08
COL12A1-206ENST00000474564 TSPY10P0CW01 314 aa15.56■□□□□ 0.08
COL12A1-206ENST00000474564 ARAP3Q8WWN8 1544 aa15.56■□□□□ 0.08
COL12A1-206ENST00000474564 TTC37Q6PGP7 1564 aa15.55■□□□□ 0.08
COL12A1-206ENST00000474564 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
COL12A1-206ENST00000474564 PTPN23Q9H3S7 1636 aa15.54■□□□□ 0.08
COL12A1-206ENST00000474564 FANCAO15360 1455 aa15.53■□□□□ 0.08
COL12A1-206ENST00000474564 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
COL12A1-206ENST00000474564 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.08
COL12A1-206ENST00000474564 TEX14Q8IWB6 1497 aa15.52■□□□□ 0.08
COL12A1-206ENST00000474564 CFAP74Q9C0B2 1584 aa15.52■□□□□ 0.07
COL12A1-206ENST00000474564 DIP2BQ9P265 1576 aa15.52■□□□□ 0.07
COL12A1-206ENST00000474564 CAMSAP2Q08AD1 1489 aa15.51■□□□□ 0.07
COL12A1-206ENST00000474564 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
COL12A1-206ENST00000474564 ZNF644Q9H582 1327 aaPredicted RBP15.5■□□□□ 0.07
COL12A1-206ENST00000474564 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL12A1-206ENST00000474564 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
COL12A1-206ENST00000474564 NEO1Q92859 1461 aa15.49■□□□□ 0.07
COL12A1-206ENST00000474564 AKNAQ7Z591 1439 aa15.48■□□□□ 0.07
COL12A1-206ENST00000474564 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
COL12A1-206ENST00000474564 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
COL12A1-206ENST00000474564 ADGRL1O94910 1474 aa15.46■□□□□ 0.07
COL12A1-206ENST00000474564 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
COL12A1-206ENST00000474564 SCAPERQ9BY12 1400 aa15.45■□□□□ 0.06
COL12A1-206ENST00000474564 DAPK1P53355 1430 aa15.44■□□□□ 0.06
COL12A1-206ENST00000474564 CHIC2Q9UKJ5 165 aa15.44■□□□□ 0.06
COL12A1-206ENST00000474564 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
COL12A1-206ENST00000474564 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
COL12A1-206ENST00000474564 SAMD9LQ8IVG5 1584 aa15.43■□□□□ 0.06
COL12A1-206ENST00000474564 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
COL12A1-206ENST00000474564 ARHGEF5Q12774 1597 aa15.42■□□□□ 0.06
COL12A1-206ENST00000474564 DENND4BO75064 1496 aaPredicted RBP15.41■□□□□ 0.06
COL12A1-206ENST00000474564 DNMT1P26358 1616 aaKnown RBP15.41■□□□□ 0.06
COL12A1-206ENST00000474564 SYCP2Q9BX26 1530 aa15.41■□□□□ 0.06
COL12A1-206ENST00000474564 ABCC5O15440 1437 aa15.41■□□□□ 0.06
COL12A1-206ENST00000474564 ABCC1P33527 1531 aa15.4■□□□□ 0.06
COL12A1-206ENST00000474564 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
COL12A1-206ENST00000474564 AFAP1Q8N556 730 aa15.39■□□□□ 0.05
COL12A1-206ENST00000474564 MBD5Q9P267 1494 aa15.39■□□□□ 0.05
COL12A1-206ENST00000474564 KIF13AQ9H1H9 1805 aa15.38■□□□□ 0.05
COL12A1-206ENST00000474564 ROCK1Q13464 1354 aa15.38■□□□□ 0.05
COL12A1-206ENST00000474564 TSPOAP1O95153 1857 aa15.38■□□□□ 0.05
COL12A1-206ENST00000474564 C9orf84Q5VXU9 1444 aa15.38■□□□□ 0.05
COL12A1-206ENST00000474564 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
COL12A1-206ENST00000474564 RRP7BPQ9NSQ0 103 aa15.37■□□□□ 0.05
COL12A1-206ENST00000474564 RTEL1-TNFRSF6BF6WH68 1400 aa15.36■□□□□ 0.05
COL12A1-206ENST00000474564 SETD5Q9C0A6 1442 aa15.35■□□□□ 0.05
COL12A1-206ENST00000474564 TRAPPC8Q9Y2L5 1435 aa15.34■□□□□ 0.05
COL12A1-206ENST00000474564 HRCP23327 699 aa15.34■□□□□ 0.05
COL12A1-206ENST00000474564 POGZQ7Z3K3 1410 aa15.34■□□□□ 0.05
COL12A1-206ENST00000474564 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.05
COL12A1-206ENST00000474564 RAPGEF3O95398 923 aa15.33■□□□□ 0.04
COL12A1-206ENST00000474564 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
COL12A1-206ENST00000474564 PTPRKQ15262 1439 aa15.32■□□□□ 0.04
COL12A1-206ENST00000474564 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
COL12A1-206ENST00000474564 ADGRL2O95490 1459 aa15.31■□□□□ 0.04
COL12A1-206ENST00000474564 MAST1Q9Y2H9 1570 aa15.31■□□□□ 0.04
COL12A1-206ENST00000474564 CROCC2H7BZ55 1655 aa15.3■□□□□ 0.04
COL12A1-206ENST00000474564 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
COL12A1-206ENST00000474564 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
COL12A1-206ENST00000474564 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
COL12A1-206ENST00000474564 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
COL12A1-206ENST00000474564 MLH3Q9UHC1 1453 aa15.28■□□□□ 0.04
COL12A1-206ENST00000474564 TRIM52Q96A61 297 aa15.28■□□□□ 0.04
COL12A1-206ENST00000474564 ATP7AQ04656 1500 aa15.27■□□□□ 0.04
COL12A1-206ENST00000474564 NAIPQ13075 1403 aa15.27■□□□□ 0.04
COL12A1-206ENST00000474564 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
COL12A1-206ENST00000474564 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
COL12A1-206ENST00000474564 KDM5CP41229 1560 aa15.25■□□□□ 0.03
COL12A1-206ENST00000474564 HECW2Q9P2P5 1572 aa15.25■□□□□ 0.03
COL12A1-206ENST00000474564 DUOX2Q9NRD8 1548 aa15.25■□□□□ 0.03
COL12A1-206ENST00000474564 PLXNC1O60486 1568 aa15.24■□□□□ 0.03
COL12A1-206ENST00000474564 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
COL12A1-206ENST00000474564 DHX29Q7Z478 1369 aaKnown RBP15.23■□□□□ 0.03
COL12A1-206ENST00000474564 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
COL12A1-206ENST00000474564 KDM6BO15054 1643 aa15.22■□□□□ 0.03
COL12A1-206ENST00000474564 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
COL12A1-206ENST00000474564 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
COL12A1-206ENST00000474564 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
COL12A1-206ENST00000474564 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.03
COL12A1-206ENST00000474564 GCC2Q8IWJ2 1684 aa15.21■□□□□ 0.03
COL12A1-206ENST00000474564 KANK1Q14678 1352 aa15.21■□□□□ 0.02
COL12A1-206ENST00000474564 A2MP01023 1474 aa15.2■□□□□ 0.02
COL12A1-206ENST00000474564 KIF3BO15066 747 aa15.2■□□□□ 0.02
COL12A1-206ENST00000474564 ATP10AO60312 1499 aa15.2■□□□□ 0.02
COL12A1-206ENST00000474564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL12A1-206ENST00000474564 KIDINS220Q9ULH0 1771 aa15.17■□□□□ 0.02
COL12A1-206ENST00000474564 COL17A1Q9UMD9 1497 aaPredicted RBP15.17■□□□□ 0.02
COL12A1-206ENST00000474564 ARID4BQ4LE39 1312 aaPredicted RBP15.17■□□□□ 0.02
COL12A1-206ENST00000474564 NUP155O75694 1391 aa15.16■□□□□ 0.02
COL12A1-206ENST00000474564 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
COL12A1-206ENST00000474564 ESF1Q9H501 851 aaKnown RBP15.16■□□□□ 0.02
COL12A1-206ENST00000474564 FRMPD1Q5SYB0 1578 aa15.15■□□□□ 0.02
COL12A1-206ENST00000474564 GGT6Q6P531 493 aa15.14■□□□□ 0.01
COL12A1-206ENST00000474564 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms