RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 LMOD2Q6P5Q4 547 aa6.06□□□□□ -1.44
CCNL1-215ENST00000474539 KIF3BO15066 747 aa6.05□□□□□ -1.44
CCNL1-215ENST00000474539 TEX14Q8IWB6 1497 aa6.05□□□□□ -1.44
CCNL1-215ENST00000474539 ZBTB7CA1YPR0 619 aa6.05□□□□□ -1.44
CCNL1-215ENST00000474539 CNGB1Q14028 1251 aaPredicted RBP6.05□□□□□ -1.44
CCNL1-215ENST00000474539 MYOM3Q5VTT5 1437 aa6.05□□□□□ -1.44
CCNL1-215ENST00000474539 LMOD3Q0VAK6 560 aa6.04□□□□□ -1.44
CCNL1-215ENST00000474539 ERICH3Q5RHP9 1530 aa6.04□□□□□ -1.44
CCNL1-215ENST00000474539 CASC1Q6TDU7 716 aa6.03□□□□□ -1.44
CCNL1-215ENST00000474539 THEMISQ8N1K5 641 aaPredicted RBP6.03□□□□□ -1.44
CCNL1-215ENST00000474539 SCAPERQ9BY12 1400 aa6.03□□□□□ -1.44
CCNL1-215ENST00000474539 TOPBP1Q92547 1522 aa6.03□□□□□ -1.44
CCNL1-215ENST00000474539 SRPK2P78362 688 aaKnown RBP6.03□□□□□ -1.44
CCNL1-215ENST00000474539 RTL5Q5HYW3 569 aaPredicted RBP6.03□□□□□ -1.44
CCNL1-215ENST00000474539 MEX3CQ5U5Q3 659 aaKnown RBP6.03□□□□□ -1.44
CCNL1-215ENST00000474539 RTF1Q92541 710 aaKnown RBP6.03□□□□□ -1.44
CCNL1-215ENST00000474539 PRG4Q92954 1404 aaPredicted RBP6.03□□□□□ -1.44
CCNL1-215ENST00000474539 ROCK2O75116 1388 aaKnown RBP6.02□□□□□ -1.45
CCNL1-215ENST00000474539 NUP155O75694 1391 aa6.02□□□□□ -1.45
CCNL1-215ENST00000474539 CSB-PGBD3P0DP91 1061 aa6.02□□□□□ -1.45
CCNL1-215ENST00000474539 KIAA0586Q9BVV6 1533 aa6.02□□□□□ -1.45
CCNL1-215ENST00000474539 CDK11BP21127 795 aaKnown RBP6.02□□□□□ -1.45
CCNL1-215ENST00000474539 PSME1Q06323 249 aa6.02□□□□□ -1.45
CCNL1-215ENST00000474539 ATF3P18847 181 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 WDR97A6NE52 1622 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 KIF21BO75037 1637 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 PLB1Q6P1J6 1458 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 GOLGA2Q08379 1002 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 RGL3Q3MIN7 710 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 CUL7Q14999 1698 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 PEG3Q9GZU2 1588 aa6.01□□□□□ -1.45
CCNL1-215ENST00000474539 HSP90B1P14625 803 aaKnown RBP6.01□□□□□ -1.45
CCNL1-215ENST00000474539 SF3B2Q13435 895 aaKnown RBP5.99□□□□□ -1.45
CCNL1-215ENST00000474539 NGDNQ8NEJ9 315 aaKnown RBP5.99□□□□□ -1.45
CCNL1-215ENST00000474539 IGF1RP08069 1367 aa5.99□□□□□ -1.45
CCNL1-215ENST00000474539 FYCO1Q9BQS8 1478 aa5.99□□□□□ -1.45
CCNL1-215ENST00000474539 CCDC9Q9Y3X0 531 aaKnown RBP5.99□□□□□ -1.45
CCNL1-215ENST00000474539 NGEFQ8N5V2 710 aa5.99□□□□□ -1.45
CCNL1-215ENST00000474539 CCDC144AA2RUR9 1427 aa5.99□□□□□ -1.45
CCNL1-215ENST00000474539 ABCA10Q8WWZ4 1543 aa5.99□□□□□ -1.45
CCNL1-215ENST00000474539 SNAPC4Q5SXM2 1469 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 AKNAQ7Z591 1439 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 ANP32BQ92688 251 aaKnown RBP5.98□□□□□ -1.45
CCNL1-215ENST00000474539 SLC52A1Q9NWF4 448 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 HECW1Q76N89 1606 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 MIA2Q96PC5 1412 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 RPGRIP1LQ68CZ1 1315 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 DHX57Q6P158 1386 aaKnown RBP5.98□□□□□ -1.45
CCNL1-215ENST00000474539 CASKIN1Q8WXD9 1431 aa5.98□□□□□ -1.45
CCNL1-215ENST00000474539 PKD2Q13563 968 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 FHOD3Q2V2M9 1422 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 EVC2Q86UK5 1308 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 MORC1Q86VD1 984 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 RRBP1Q9P2E9 1410 aaKnown RBP5.97□□□□□ -1.45
CCNL1-215ENST00000474539 CHMP4CQ96CF2 233 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 PHF23Q9BUL5 403 aaPredicted RBP5.97□□□□□ -1.45
CCNL1-215ENST00000474539 AQRO60306 1485 aaKnown RBP eCLIP5.97□□□□□ -1.455e-8■■■□□ 18.5
CCNL1-215ENST00000474539 ANKLE2Q86XL3 938 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 ARHGAP5Q13017 1502 aa5.97□□□□□ -1.45
CCNL1-215ENST00000474539 ROCK1Q13464 1354 aa5.96□□□□□ -1.45
CCNL1-215ENST00000474539 HSP90AA1P07900 732 aaKnown RBP5.96□□□□□ -1.45
CCNL1-215ENST00000474539 DCAF11Q8TEB1 546 aa5.96□□□□□ -1.45
CCNL1-215ENST00000474539 IPO8O15397 1037 aaKnown RBP5.96□□□□□ -1.46
CCNL1-215ENST00000474539 GPRASP1Q5JY77 1395 aa5.96□□□□□ -1.46
CCNL1-215ENST00000474539 TOP2BQ02880 1626 aa5.96□□□□□ -1.46
CCNL1-215ENST00000474539 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.46
CCNL1-215ENST00000474539 EVA1CP58658 441 aa5.96□□□□□ -1.46
CCNL1-215ENST00000474539 MRS2Q9HD23 443 aa5.96□□□□□ -1.46
CCNL1-215ENST00000474539 DAPK1P53355 1430 aa5.96□□□□□ -1.46
CCNL1-215ENST00000474539 ANP32EQ9BTT0 268 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 BICRAQ9NZM4 1560 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 ARXQ96QS3 562 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 RALBP1Q15311 655 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 HFM1A2PYH4 1435 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 PAK3O75914 559 aaPredicted RBP5.95□□□□□ -1.46
CCNL1-215ENST00000474539 RAD54L2Q9Y4B4 1467 aa5.95□□□□□ -1.46
CCNL1-215ENST00000474539 NCOA2Q15596 1464 aa5.94□□□□□ -1.46
CCNL1-215ENST00000474539 TROQ12816 1431 aaPredicted RBP5.94□□□□□ -1.46
CCNL1-215ENST00000474539 ANP32AP39687 249 aaKnown RBP5.94□□□□□ -1.46
CCNL1-215ENST00000474539 CGNL1Q0VF96 1302 aa5.94□□□□□ -1.46
CCNL1-215ENST00000474539 KTN1Q86UP2 1357 aaKnown RBP5.94□□□□□ -1.46
CCNL1-215ENST00000474539 HNRNPMP52272 730 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCNL1-215ENST00000474539 LRPPRCP42704 1394 aaKnown RBP5.94□□□□□ -1.46
CCNL1-215ENST00000474539 LRRFIP1Q32MZ4 808 aaKnown RBP5.94□□□□□ -1.46
CCNL1-215ENST00000474539 G3V3G9 751 aa5.93□□□□□ -1.46
CCNL1-215ENST00000474539 DCAF8Q5TAQ9 597 aa5.93□□□□□ -1.46
CCNL1-215ENST00000474539 FTSJ3Q8IY81 847 aaKnown RBP5.93□□□□□ -1.46
CCNL1-215ENST00000474539 PPM1GO15355 546 aaPredicted RBP5.93□□□□□ -1.46
CCNL1-215ENST00000474539 AMPHP49418 695 aa5.93□□□□□ -1.46
CCNL1-215ENST00000474539 MPHOSPH9Q99550 1183 aa5.93□□□□□ -1.46
CCNL1-215ENST00000474539 IQGAP2Q13576 1575 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 STK31Q9BXU1 1019 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 GRIN2AQ12879 1464 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 NCLP19338 710 aaKnown RBP5.92□□□□□ -1.46
CCNL1-215ENST00000474539 C1orf141Q5JVX7 400 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 COG3Q96JB2 828 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 PRDM2Q13029 1718 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 SMC4Q9NTJ3 1288 aa5.92□□□□□ -1.46
CCNL1-215ENST00000474539 CD109Q6YHK3 1445 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms