RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.91■■■□□ 2.54
CDHR3-210ENST00000474330 ARAP3Q8WWN8 1544 aa30.9■■■□□ 2.54
CDHR3-210ENST00000474330 ITSN2Q9NZM3 1697 aa30.9■■■□□ 2.54
CDHR3-210ENST00000474330 MIA2Q96PC5 1412 aa30.89■■■□□ 2.54
CDHR3-210ENST00000474330 CDC42BPAQ5VT25 1732 aa30.88■■■□□ 2.53
CDHR3-210ENST00000474330 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
CDHR3-210ENST00000474330 NEO1Q92859 1461 aa30.87■■■□□ 2.53
CDHR3-210ENST00000474330 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
CDHR3-210ENST00000474330 GPATCH8Q9UKJ3 1502 aaKnown RBP30.83■■■□□ 2.53
CDHR3-210ENST00000474330 PREX2Q70Z35 1606 aa30.82■■■□□ 2.52
CDHR3-210ENST00000474330 FAM50AQ14320 339 aaKnown RBP30.82■■■□□ 2.52
CDHR3-210ENST00000474330 TCOF1Q13428 1488 aaKnown RBP30.81■■■□□ 2.52
CDHR3-210ENST00000474330 CDC42BPBQ9Y5S2 1711 aa30.79■■■□□ 2.52
CDHR3-210ENST00000474330 FANCAO15360 1455 aa30.78■■■□□ 2.52
CDHR3-210ENST00000474330 PLCH2O75038 1416 aa30.78■■■□□ 2.52
CDHR3-210ENST00000474330 RAPGEF3O95398 923 aa30.76■■■□□ 2.52
CDHR3-210ENST00000474330 AKNAQ7Z591 1439 aa30.76■■■□□ 2.51
CDHR3-210ENST00000474330 CFDP1Q9UEE9 299 aaPredicted RBP30.73■■■□□ 2.51
CDHR3-210ENST00000474330 CFAP74Q9C0B2 1584 aa30.73■■■□□ 2.51
CDHR3-210ENST00000474330 KDM4FA0A1W2PPD8 638 aa30.73■■■□□ 2.51
CDHR3-210ENST00000474330 FRMPD1Q5SYB0 1578 aa30.72■■■□□ 2.51
CDHR3-210ENST00000474330 ARHGAP5Q13017 1502 aa30.7■■■□□ 2.51
CDHR3-210ENST00000474330 ITGAEP38570 1179 aa30.68■■■□□ 2.5
CDHR3-210ENST00000474330 AEBP2Q6ZN18 517 aaPredicted RBP30.68■■■□□ 2.5
CDHR3-210ENST00000474330 RICTORQ6R327 1708 aa30.67■■■□□ 2.5
CDHR3-210ENST00000474330 DENND4BO75064 1496 aaPredicted RBP30.65■■■□□ 2.5
CDHR3-210ENST00000474330 CAMSAP2Q08AD1 1489 aa30.64■■■□□ 2.49
CDHR3-210ENST00000474330 EFCAB2Q5VUJ9 269 aa30.62■■■□□ 2.49
CDHR3-210ENST00000474330 ZNF644Q9H582 1327 aaPredicted RBP30.62■■■□□ 2.49
CDHR3-210ENST00000474330 SAMD9LQ8IVG5 1584 aa30.61■■■□□ 2.49
CDHR3-210ENST00000474330 ADGRL1O94910 1474 aa30.59■■■□□ 2.49
CDHR3-210ENST00000474330 SCAPERQ9BY12 1400 aa30.59■■■□□ 2.49
CDHR3-210ENST00000474330 ZNF777Q9ULD5 760 aaPredicted RBP30.58■■■□□ 2.49
CDHR3-210ENST00000474330 PTPRKQ15262 1439 aa30.57■■■□□ 2.48
CDHR3-210ENST00000474330 DNMT1P26358 1616 aaKnown RBP30.57■■■□□ 2.48
CDHR3-210ENST00000474330 DAPK1P53355 1430 aa30.52■■■□□ 2.48
CDHR3-210ENST00000474330 PLEKHH2Q8IVE3 1493 aa30.52■■■□□ 2.48
CDHR3-210ENST00000474330 ZMYM4Q5VZL5 1548 aa30.51■■■□□ 2.47
CDHR3-210ENST00000474330 ABCC5O15440 1437 aa30.51■■■□□ 2.47
CDHR3-210ENST00000474330 POGZQ7Z3K3 1410 aa30.51■■■□□ 2.47
CDHR3-210ENST00000474330 ABCC1P33527 1531 aa30.5■■■□□ 2.47
CDHR3-210ENST00000474330 SYCP2Q9BX26 1530 aa30.48■■■□□ 2.47
CDHR3-210ENST00000474330 KIAA1107Q9UPP5 1409 aa30.46■■■□□ 2.47
CDHR3-210ENST00000474330 ARHGEF5Q12774 1597 aa30.46■■■□□ 2.47
CDHR3-210ENST00000474330 ARHGEF40Q8TER5 1519 aa30.45■■■□□ 2.47
CDHR3-210ENST00000474330 ARHGEF12Q9NZN5 1544 aa30.44■■■□□ 2.46
CDHR3-210ENST00000474330 CROCC2H7BZ55 1655 aa30.44■■■□□ 2.46
CDHR3-210ENST00000474330 SETD5Q9C0A6 1442 aa30.44■■■□□ 2.46
CDHR3-210ENST00000474330 MBD5Q9P267 1494 aa30.44■■■□□ 2.46
CDHR3-210ENST00000474330 AFAP1Q8N556 730 aa30.44■■■□□ 2.46
CDHR3-210ENST00000474330 YEATS2Q9ULM3 1422 aa30.43■■■□□ 2.46
CDHR3-210ENST00000474330 MAGI2Q86UL8 1455 aa30.43■■■□□ 2.46
CDHR3-210ENST00000474330 HFM1A2PYH4 1435 aa30.41■■■□□ 2.46
CDHR3-210ENST00000474330 RSPH4AQ5TD94 716 aa30.41■■■□□ 2.46
CDHR3-210ENST00000474330 ZFYVE16Q7Z3T8 1539 aa30.41■■■□□ 2.46
CDHR3-210ENST00000474330 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.46
CDHR3-210ENST00000474330 ZNF518AQ6AHZ1 1483 aa30.39■■■□□ 2.46
CDHR3-210ENST00000474330 ROCK1Q13464 1354 aa30.39■■■□□ 2.46
CDHR3-210ENST00000474330 CHIC2Q9UKJ5 165 aa30.39■■■□□ 2.46
CDHR3-210ENST00000474330 KDM5CP41229 1560 aa30.39■■■□□ 2.45
CDHR3-210ENST00000474330 CCDC141Q6ZP82 1450 aa30.38■■■□□ 2.45
CDHR3-210ENST00000474330 SIGLEC1Q9BZZ2 1709 aa30.38■■■□□ 2.45
CDHR3-210ENST00000474330 SHANK2Q9UPX8 1470 aa30.37■■■□□ 2.45
CDHR3-210ENST00000474330 TRAPPC8Q9Y2L5 1435 aa30.37■■■□□ 2.45
CDHR3-210ENST00000474330 RAB3GAP2Q9H2M9 1393 aa30.37■■■□□ 2.45
CDHR3-210ENST00000474330 NAIPQ13075 1403 aa30.36■■■□□ 2.45
CDHR3-210ENST00000474330 HRCP23327 699 aa30.35■■■□□ 2.45
CDHR3-210ENST00000474330 ADGBQ8N7X0 1667 aa30.35■■■□□ 2.45
CDHR3-210ENST00000474330 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
CDHR3-210ENST00000474330 GCC2Q8IWJ2 1684 aa30.33■■■□□ 2.45
CDHR3-210ENST00000474330 ADAMTSL3P82987 1691 aa30.32■■■□□ 2.44
CDHR3-210ENST00000474330 BCORL1Q5H9F3 1711 aa30.32■■■□□ 2.44
CDHR3-210ENST00000474330 TSPY4P0CV99 314 aa30.32■■■□□ 2.44
CDHR3-210ENST00000474330 TSPY10P0CW01 314 aa30.32■■■□□ 2.44
CDHR3-210ENST00000474330 RRP7BPQ9NSQ0 103 aa30.3■■■□□ 2.44
CDHR3-210ENST00000474330 C9orf84Q5VXU9 1444 aa30.29■■■□□ 2.44
CDHR3-210ENST00000474330 ARID4BQ4LE39 1312 aaPredicted RBP30.29■■■□□ 2.44
CDHR3-210ENST00000474330 NCOA1Q15788 1441 aa30.29■■■□□ 2.44
CDHR3-210ENST00000474330 HECW2Q9P2P5 1572 aa30.28■■■□□ 2.44
CDHR3-210ENST00000474330 ATP10AO60312 1499 aa30.28■■■□□ 2.44
CDHR3-210ENST00000474330 MLH3Q9UHC1 1453 aa30.28■■■□□ 2.44
CDHR3-210ENST00000474330 MAST1Q9Y2H9 1570 aa30.27■■■□□ 2.44
CDHR3-210ENST00000474330 CCER1Q8TC90 406 aaPredicted RBP30.26■■■□□ 2.44
CDHR3-210ENST00000474330 ANKRD30AQ9BXX3 1397 aa30.26■■■□□ 2.43
CDHR3-210ENST00000474330 KIDINS220Q9ULH0 1771 aa30.23■■■□□ 2.43
CDHR3-210ENST00000474330 DIP2CQ9Y2E4 1556 aa30.22■■■□□ 2.43
CDHR3-210ENST00000474330 ABCA6Q8N139 1617 aa30.21■■■□□ 2.43
CDHR3-210ENST00000474330 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.43
CDHR3-210ENST00000474330 MYT1LQ9UL68 1186 aa30.19■■■□□ 2.42
CDHR3-210ENST00000474330 MADDQ8WXG6 1647 aa30.19■■■□□ 2.42
CDHR3-210ENST00000474330 PLXNC1O60486 1568 aa30.17■■■□□ 2.42
CDHR3-210ENST00000474330 SPAG9O60271 1321 aaKnown RBP30.17■■■□□ 2.42
CDHR3-210ENST00000474330 DHX57Q6P158 1386 aaKnown RBP30.16■■■□□ 2.42
CDHR3-210ENST00000474330 ATP7AQ04656 1500 aa30.16■■■□□ 2.42
CDHR3-210ENST00000474330 RTEL1-TNFRSF6BF6WH68 1400 aa30.16■■■□□ 2.42
CDHR3-210ENST00000474330 PTPRMP28827 1452 aa30.15■■■□□ 2.42
CDHR3-210ENST00000474330 REREQ9P2R6 1566 aa30.14■■■□□ 2.42
CDHR3-210ENST00000474330 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
CDHR3-210ENST00000474330 MLECQ14165 292 aa30.11■■■□□ 2.41
CDHR3-210ENST00000474330 KIF15Q9NS87 1388 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms