RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DENND4BO75064 1496 aaPredicted RBP21.53■■□□□ 1.04
USF1-205ENST00000473969 ADGRL1O94910 1474 aa21.52■■□□□ 1.03
USF1-205ENST00000473969 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
USF1-205ENST00000473969 CFDP1Q9UEE9 299 aaPredicted RBP21.51■■□□□ 1.03
USF1-205ENST00000473969 ZNF777Q9ULD5 760 aaPredicted RBP21.51■■□□□ 1.03
USF1-205ENST00000473969 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
USF1-205ENST00000473969 LRRC9Q6ZRR7 1453 aa21.49■■□□□ 1.03
USF1-205ENST00000473969 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
USF1-205ENST00000473969 PREX2Q70Z35 1606 aa21.47■■□□□ 1.03
USF1-205ENST00000473969 KANK4Q5T7N3 995 aaPredicted RBP21.46■■□□□ 1.03
USF1-205ENST00000473969 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
USF1-205ENST00000473969 SUPT6HQ7KZ85 1726 aaKnown RBP21.45■■□□□ 1.02
USF1-205ENST00000473969 NCOA2Q15596 1464 aa21.44■■□□□ 1.02
USF1-205ENST00000473969 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
USF1-205ENST00000473969 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
USF1-205ENST00000473969 POGZQ7Z3K3 1410 aa21.41■■□□□ 1.02
USF1-205ENST00000473969 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
USF1-205ENST00000473969 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.01
USF1-205ENST00000473969 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.01
USF1-205ENST00000473969 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
USF1-205ENST00000473969 FRMPD1Q5SYB0 1578 aa21.37■■□□□ 1.01
USF1-205ENST00000473969 RICTORQ6R327 1708 aa21.37■■□□□ 1.01
USF1-205ENST00000473969 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
USF1-205ENST00000473969 MAGI2Q86UL8 1455 aa21.36■■□□□ 1.01
USF1-205ENST00000473969 ABCC1P33527 1531 aa21.34■■□□□ 1.01
USF1-205ENST00000473969 ARID4BQ4LE39 1312 aaPredicted RBP21.34■■□□□ 1.01
USF1-205ENST00000473969 KIAA1107Q9UPP5 1409 aa21.33■■□□□ 1.01
USF1-205ENST00000473969 ZMYM4Q5VZL5 1548 aa21.33■■□□□ 1
USF1-205ENST00000473969 SAMD9LQ8IVG5 1584 aa21.32■■□□□ 1
USF1-205ENST00000473969 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
USF1-205ENST00000473969 ZNF644Q9H582 1327 aaPredicted RBP21.31■■□□□ 1
USF1-205ENST00000473969 ZFYVE16Q7Z3T8 1539 aa21.31■■□□□ 1
USF1-205ENST00000473969 ARHGEF12Q9NZN5 1544 aa21.31■■□□□ 1
USF1-205ENST00000473969 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
USF1-205ENST00000473969 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
USF1-205ENST00000473969 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
USF1-205ENST00000473969 MYOM3Q5VTT5 1437 aa21.29■■□□□ 1
USF1-205ENST00000473969 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
USF1-205ENST00000473969 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
USF1-205ENST00000473969 MIA2Q96PC5 1412 aa21.27■■□□□ 1
USF1-205ENST00000473969 KDM5CP41229 1560 aa21.27■□□□□ 0.99
USF1-205ENST00000473969 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
USF1-205ENST00000473969 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
USF1-205ENST00000473969 ATP10AO60312 1499 aa21.25■□□□□ 0.99
USF1-205ENST00000473969 HECW2Q9P2P5 1572 aa21.24■□□□□ 0.99
USF1-205ENST00000473969 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
USF1-205ENST00000473969 TSPY4P0CV99 314 aa21.23■□□□□ 0.99
USF1-205ENST00000473969 TSPY10P0CW01 314 aa21.23■□□□□ 0.99
USF1-205ENST00000473969 C9orf84Q5VXU9 1444 aa21.21■□□□□ 0.99
USF1-205ENST00000473969 MBD5Q9P267 1494 aa21.2■□□□□ 0.98
USF1-205ENST00000473969 PPARGC1BQ86YN6 1023 aaKnown RBP21.2■□□□□ 0.98
USF1-205ENST00000473969 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
USF1-205ENST00000473969 MLECQ14165 292 aa21.17■□□□□ 0.98
USF1-205ENST00000473969 FGD6Q6ZV73 1430 aa21.16■□□□□ 0.98
USF1-205ENST00000473969 ATP7AQ04656 1500 aa21.14■□□□□ 0.98
USF1-205ENST00000473969 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.98
USF1-205ENST00000473969 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.97
USF1-205ENST00000473969 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
USF1-205ENST00000473969 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
USF1-205ENST00000473969 KIDINS220Q9ULH0 1771 aa21.13■□□□□ 0.97
USF1-205ENST00000473969 PTPN23Q9H3S7 1636 aa21.12■□□□□ 0.97
USF1-205ENST00000473969 ABCA6Q8N139 1617 aa21.11■□□□□ 0.97
USF1-205ENST00000473969 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
USF1-205ENST00000473969 REREQ9P2R6 1566 aa21.09■□□□□ 0.97
USF1-205ENST00000473969 INO80Q9ULG1 1556 aaPredicted RBP21.09■□□□□ 0.97
USF1-205ENST00000473969 TCOF1Q13428 1488 aaKnown RBP21.08■□□□□ 0.97
USF1-205ENST00000473969 BCORL1Q5H9F3 1711 aa21.08■□□□□ 0.97
USF1-205ENST00000473969 A2MP01023 1474 aa21.07■□□□□ 0.96
USF1-205ENST00000473969 ILDR1Q86SU0 546 aaPredicted RBP21.06■□□□□ 0.96
USF1-205ENST00000473969 AGLP35573 1532 aa21.04■□□□□ 0.96
USF1-205ENST00000473969 ADAMTSL3P82987 1691 aa21.03■□□□□ 0.96
USF1-205ENST00000473969 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
USF1-205ENST00000473969 ABCC5O15440 1437 aa21.03■□□□□ 0.96
USF1-205ENST00000473969 DAPK1P53355 1430 aa21.03■□□□□ 0.96
USF1-205ENST00000473969 ADGBQ8N7X0 1667 aa21.02■□□□□ 0.95
USF1-205ENST00000473969 SIGLEC1Q9BZZ2 1709 aa21.01■□□□□ 0.95
USF1-205ENST00000473969 GGT6Q6P531 493 aa21.01■□□□□ 0.95
USF1-205ENST00000473969 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
USF1-205ENST00000473969 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
USF1-205ENST00000473969 MAST1Q9Y2H9 1570 aa21■□□□□ 0.95
USF1-205ENST00000473969 MADDQ8WXG6 1647 aa21■□□□□ 0.95
USF1-205ENST00000473969 KIF3BO15066 747 aa20.99■□□□□ 0.95
USF1-205ENST00000473969 PTPRMP28827 1452 aa20.99■□□□□ 0.95
USF1-205ENST00000473969 SHANK2Q9UPX8 1470 aa20.99■□□□□ 0.95
USF1-205ENST00000473969 RRP7BPQ9NSQ0 103 aa20.98■□□□□ 0.95
USF1-205ENST00000473969 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
USF1-205ENST00000473969 DNMT1P26358 1616 aaKnown RBP20.97■□□□□ 0.95
USF1-205ENST00000473969 PLXNC1O60486 1568 aa20.96■□□□□ 0.95
USF1-205ENST00000473969 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
USF1-205ENST00000473969 RIMS1Q86UR5 1692 aaKnown RBP20.95■□□□□ 0.94
USF1-205ENST00000473969 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
USF1-205ENST00000473969 ITGAEP38570 1179 aa20.94■□□□□ 0.94
USF1-205ENST00000473969 FER1L4A9Z1Z3 1794 aa20.93■□□□□ 0.94
USF1-205ENST00000473969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.93■□□□□ 0.94
USF1-205ENST00000473969 CNTLNQ9NXG0 1405 aa20.93■□□□□ 0.94
USF1-205ENST00000473969 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
USF1-205ENST00000473969 DUOX2Q9NRD8 1548 aa20.91■□□□□ 0.94
USF1-205ENST00000473969 CEBPAP49715 358 aaPredicted RBP20.88■□□□□ 0.93
USF1-205ENST00000473969 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
USF1-205ENST00000473969 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms