RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
CLIC3-201ENST00000473911 ZFYVE16Q7Z3T8 1539 aa25.29■■□□□ 1.64
CLIC3-201ENST00000473911 PLCH2O75038 1416 aa25.29■■□□□ 1.64
CLIC3-201ENST00000473911 SCAPERQ9BY12 1400 aa25.28■■□□□ 1.64
CLIC3-201ENST00000473911 MLECQ14165 292 aa25.25■■□□□ 1.63
CLIC3-201ENST00000473911 KIF14Q15058 1648 aa25.25■■□□□ 1.63
CLIC3-201ENST00000473911 POGZQ7Z3K3 1410 aa25.24■■□□□ 1.63
CLIC3-201ENST00000473911 HSPA2P54652 639 aa25.24■■□□□ 1.63
CLIC3-201ENST00000473911 CLIP1P30622 1438 aa25.23■■□□□ 1.63
CLIC3-201ENST00000473911 LRRIQ1Q96JM4 1722 aa25.22■■□□□ 1.63
CLIC3-201ENST00000473911 CASKIN1Q8WXD9 1431 aa25.21■■□□□ 1.63
CLIC3-201ENST00000473911 MAGI2Q86UL8 1455 aa25.21■■□□□ 1.63
CLIC3-201ENST00000473911 TROQ12816 1431 aaPredicted RBP25.2■■□□□ 1.63
CLIC3-201ENST00000473911 MYO5CQ9NQX4 1742 aa25.19■■□□□ 1.62
CLIC3-201ENST00000473911 CCDC18Q5T9S5 1454 aa25.17■■□□□ 1.62
CLIC3-201ENST00000473911 EFCAB2Q5VUJ9 269 aa25.16■■□□□ 1.62
CLIC3-201ENST00000473911 FER1L4A9Z1Z3 1794 aa25.16■■□□□ 1.62
CLIC3-201ENST00000473911 ATP10AO60312 1499 aa25.14■■□□□ 1.61
CLIC3-201ENST00000473911 FYCO1Q9BQS8 1478 aa25.13■■□□□ 1.61
CLIC3-201ENST00000473911 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
CLIC3-201ENST00000473911 ARHGEF12Q9NZN5 1544 aa25.11■■□□□ 1.61
CLIC3-201ENST00000473911 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
CLIC3-201ENST00000473911 ARHGAP5Q13017 1502 aa25.09■■□□□ 1.61
CLIC3-201ENST00000473911 CEBPAP49715 358 aaPredicted RBP25.09■■□□□ 1.61
CLIC3-201ENST00000473911 CDC42BPBQ9Y5S2 1711 aa25.07■■□□□ 1.6
CLIC3-201ENST00000473911 KDM5CP41229 1560 aa25.05■■□□□ 1.6
CLIC3-201ENST00000473911 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
CLIC3-201ENST00000473911 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
CLIC3-201ENST00000473911 CEP162Q5TB80 1403 aa25.01■■□□□ 1.59
CLIC3-201ENST00000473911 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
CLIC3-201ENST00000473911 ABCA6Q8N139 1617 aa24.98■■□□□ 1.59
CLIC3-201ENST00000473911 MYT1LQ9UL68 1186 aa24.98■■□□□ 1.59
CLIC3-201ENST00000473911 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
CLIC3-201ENST00000473911 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
CLIC3-201ENST00000473911 ABCC1P33527 1531 aa24.95■■□□□ 1.58
CLIC3-201ENST00000473911 MLH3Q9UHC1 1453 aa24.93■■□□□ 1.58
CLIC3-201ENST00000473911 ITSN2Q9NZM3 1697 aa24.93■■□□□ 1.58
CLIC3-201ENST00000473911 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
CLIC3-201ENST00000473911 CDC42BPAQ5VT25 1732 aa24.92■■□□□ 1.58
CLIC3-201ENST00000473911 CERKQ8TCT0 537 aa24.92■■□□□ 1.58
CLIC3-201ENST00000473911 STRCQ7RTU9 1775 aa24.91■■□□□ 1.58
CLIC3-201ENST00000473911 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
CLIC3-201ENST00000473911 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
CLIC3-201ENST00000473911 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
CLIC3-201ENST00000473911 KIDINS220Q9ULH0 1771 aa24.89■■□□□ 1.57
CLIC3-201ENST00000473911 C3P01024 1663 aa24.88■■□□□ 1.57
CLIC3-201ENST00000473911 CCNB3Q8WWL7 1395 aa24.85■■□□□ 1.57
CLIC3-201ENST00000473911 SETD1BQ9UPS6 1966 aaKnown RBP24.85■■□□□ 1.57
CLIC3-201ENST00000473911 GPATCH8Q9UKJ3 1502 aaKnown RBP24.85■■□□□ 1.57
CLIC3-201ENST00000473911 AGLP35573 1532 aa24.84■■□□□ 1.57
CLIC3-201ENST00000473911 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
CLIC3-201ENST00000473911 UHRF1BP1Q6BDS2 1440 aa24.83■■□□□ 1.57
CLIC3-201ENST00000473911 SAMD9LQ8IVG5 1584 aa24.83■■□□□ 1.57
CLIC3-201ENST00000473911 HNRNPMP52272 730 aaKnown RBP eCLIP24.8■■□□□ 1.56
CLIC3-201ENST00000473911 EHBP1L1Q8N3D4 1523 aa24.79■■□□□ 1.56
CLIC3-201ENST00000473911 SYCP2Q9BX26 1530 aa24.79■■□□□ 1.56
CLIC3-201ENST00000473911 PLEKHH2Q8IVE3 1493 aa24.74■■□□□ 1.55
CLIC3-201ENST00000473911 SPAG9O60271 1321 aaKnown RBP24.73■■□□□ 1.55
CLIC3-201ENST00000473911 ESF1Q9H501 851 aaKnown RBP24.73■■□□□ 1.55
CLIC3-201ENST00000473911 SUPT6HQ7KZ85 1726 aaKnown RBP24.72■■□□□ 1.55
CLIC3-201ENST00000473911 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
CLIC3-201ENST00000473911 KIAA1107Q9UPP5 1409 aa24.72■■□□□ 1.55
CLIC3-201ENST00000473911 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
CLIC3-201ENST00000473911 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
CLIC3-201ENST00000473911 ZNF644Q9H582 1327 aaPredicted RBP24.67■■□□□ 1.54
CLIC3-201ENST00000473911 ATP7AQ04656 1500 aa24.67■■□□□ 1.54
CLIC3-201ENST00000473911 PTPRTO14522 1441 aa24.67■■□□□ 1.54
CLIC3-201ENST00000473911 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
CLIC3-201ENST00000473911 ZMYM3Q14202 1370 aa24.67■■□□□ 1.54
CLIC3-201ENST00000473911 INO80Q9ULG1 1556 aaPredicted RBP24.66■■□□□ 1.54
CLIC3-201ENST00000473911 NCOA2Q15596 1464 aa24.64■■□□□ 1.54
CLIC3-201ENST00000473911 NCOA1Q15788 1441 aa24.64■■□□□ 1.54
CLIC3-201ENST00000473911 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
CLIC3-201ENST00000473911 PLXNC1O60486 1568 aa24.63■■□□□ 1.53
CLIC3-201ENST00000473911 CLTCQ00610 1675 aaKnown RBP24.63■■□□□ 1.53
CLIC3-201ENST00000473911 LTBP4Q8N2S1 1624 aa24.62■■□□□ 1.53
CLIC3-201ENST00000473911 A2MP01023 1474 aa24.62■■□□□ 1.53
CLIC3-201ENST00000473911 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
CLIC3-201ENST00000473911 CAMSAP1Q5T5Y3 1602 aa24.61■■□□□ 1.53
CLIC3-201ENST00000473911 NPATQ14207 1427 aa24.6■■□□□ 1.53
CLIC3-201ENST00000473911 ILDR2Q71H61 639 aa24.59■■□□□ 1.53
CLIC3-201ENST00000473911 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.53
CLIC3-201ENST00000473911 GGT6Q6P531 493 aa24.58■■□□□ 1.53
CLIC3-201ENST00000473911 NCKAP5LQ9HCH0 1330 aa24.58■■□□□ 1.52
CLIC3-201ENST00000473911 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
CLIC3-201ENST00000473911 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
CLIC3-201ENST00000473911 CAMSAP2Q08AD1 1489 aa24.53■■□□□ 1.52
CLIC3-201ENST00000473911 KANK4Q5T7N3 995 aaPredicted RBP24.53■■□□□ 1.52
CLIC3-201ENST00000473911 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
CLIC3-201ENST00000473911 MAP3K1Q13233 1512 aa24.52■■□□□ 1.52
CLIC3-201ENST00000473911 APLP2Q06481 763 aa24.52■■□□□ 1.52
CLIC3-201ENST00000473911 ADGBQ8N7X0 1667 aa24.51■■□□□ 1.51
CLIC3-201ENST00000473911 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
CLIC3-201ENST00000473911 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
CLIC3-201ENST00000473911 CCDC141Q6ZP82 1450 aa24.5■■□□□ 1.51
CLIC3-201ENST00000473911 ZNF142P52746 1687 aaPredicted RBP24.5■■□□□ 1.51
CLIC3-201ENST00000473911 SOCS7O14512 581 aa24.49■■□□□ 1.51
CLIC3-201ENST00000473911 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
CLIC3-201ENST00000473911 CEP170BQ9Y4F5 1589 aaPredicted RBP24.47■■□□□ 1.51
CLIC3-201ENST00000473911 DHX29Q7Z478 1369 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms