RNA–Protein interactions for RNA: ENST00000473555.1

CDC6-202, Transcript of cell division cycle 6, humanhuman

TSL 2

Gene CDC6, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-202ENST00000473555 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
CDC6-202ENST00000473555 STK25O00506 426 aa12.37□□□□□ -0.43
CDC6-202ENST00000473555 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
CDC6-202ENST00000473555 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
CDC6-202ENST00000473555 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
CDC6-202ENST00000473555 ERBB3P21860 1342 aa12.36□□□□□ -0.43
CDC6-202ENST00000473555 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
CDC6-202ENST00000473555 PKD2Q13563 968 aa12.31□□□□□ -0.44
CDC6-202ENST00000473555 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
CDC6-202ENST00000473555 RGL2O15211 777 aa12.28□□□□□ -0.44
CDC6-202ENST00000473555 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
CDC6-202ENST00000473555 GPR153Q6NV75 609 aa12.26□□□□□ -0.45
CDC6-202ENST00000473555 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
CDC6-202ENST00000473555 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
CDC6-202ENST00000473555 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
CDC6-202ENST00000473555 KIF3CO14782 793 aa12.18□□□□□ -0.46
CDC6-202ENST00000473555 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
CDC6-202ENST00000473555 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
CDC6-202ENST00000473555 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDC6-202ENST00000473555 SLC34A2O95436 690 aa12.08□□□□□ -0.48
CDC6-202ENST00000473555 PPP1R37O75864 691 aa12.07□□□□□ -0.48
CDC6-202ENST00000473555 RNF166Q96A37 237 aaPredicted RBP12.07□□□□□ -0.48
CDC6-202ENST00000473555 NUDT7P0C024 238 aa12.06□□□□□ -0.48
CDC6-202ENST00000473555 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
CDC6-202ENST00000473555 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
CDC6-202ENST00000473555 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
CDC6-202ENST00000473555 PTGER2P43116 358 aa12.04□□□□□ -0.48
CDC6-202ENST00000473555 ANKRD13DQ6ZTN6 518 aa12.01□□□□□ -0.49
CDC6-202ENST00000473555 LHX6Q9UPM6 363 aa12□□□□□ -0.49
CDC6-202ENST00000473555 PBX2P40425 430 aa11.99□□□□□ -0.49
CDC6-202ENST00000473555 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDC6-202ENST00000473555 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
CDC6-202ENST00000473555 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
CDC6-202ENST00000473555 FOXK1P85037 733 aa11.94□□□□□ -0.5
CDC6-202ENST00000473555 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
CDC6-202ENST00000473555 GPHNQ9NQX3 736 aaPredicted RBP11.93□□□□□ -0.5
CDC6-202ENST00000473555 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
CDC6-202ENST00000473555 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
CDC6-202ENST00000473555 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
CDC6-202ENST00000473555 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
CDC6-202ENST00000473555 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
CDC6-202ENST00000473555 DSG2Q14126 1118 aa11.87□□□□□ -0.51
CDC6-202ENST00000473555 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
CDC6-202ENST00000473555 TBC1D12O60347 775 aa11.86□□□□□ -0.51
CDC6-202ENST00000473555 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
CDC6-202ENST00000473555 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
CDC6-202ENST00000473555 PPP4R3BQ5MIZ7 849 aa11.8□□□□□ -0.52
CDC6-202ENST00000473555 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
CDC6-202ENST00000473555 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
CDC6-202ENST00000473555 TK2O00142 265 aa11.76□□□□□ -0.53
CDC6-202ENST00000473555 OXER1Q8TDS5 423 aa11.76□□□□□ -0.53
CDC6-202ENST00000473555 PSEN2P49810 448 aa11.74□□□□□ -0.53
CDC6-202ENST00000473555 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
CDC6-202ENST00000473555 UPF1Q92900 1129 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDC6-202ENST00000473555 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
CDC6-202ENST00000473555 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
CDC6-202ENST00000473555 PDE4AP27815 886 aa11.72□□□□□ -0.53
CDC6-202ENST00000473555 HCSTQ9UBK5 93 aa11.71□□□□□ -0.53
CDC6-202ENST00000473555 HRO43593 1189 aa11.69□□□□□ -0.54
CDC6-202ENST00000473555 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
CDC6-202ENST00000473555 NCKAP5LQ9HCH0 1330 aa11.68□□□□□ -0.54
CDC6-202ENST00000473555 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
CDC6-202ENST00000473555 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
CDC6-202ENST00000473555 STAC3Q96MF2 364 aa11.67□□□□□ -0.54
CDC6-202ENST00000473555 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
CDC6-202ENST00000473555 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
CDC6-202ENST00000473555 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
CDC6-202ENST00000473555 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
CDC6-202ENST00000473555 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
CDC6-202ENST00000473555 FOSBP53539 338 aa11.61□□□□□ -0.55
CDC6-202ENST00000473555 ANO8Q9HCE9 1232 aaPredicted RBP11.6□□□□□ -0.55
CDC6-202ENST00000473555 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
CDC6-202ENST00000473555 EVI5O60447 810 aa11.59□□□□□ -0.55
CDC6-202ENST00000473555 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
CDC6-202ENST00000473555 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
CDC6-202ENST00000473555 PTPREP23469 700 aa11.58□□□□□ -0.56
CDC6-202ENST00000473555 MFSD10Q14728 455 aa11.58□□□□□ -0.56
CDC6-202ENST00000473555 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
CDC6-202ENST00000473555 MAP3K9P80192 1104 aa11.56□□□□□ -0.56
CDC6-202ENST00000473555 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
CDC6-202ENST00000473555 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
CDC6-202ENST00000473555 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
CDC6-202ENST00000473555 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
CDC6-202ENST00000473555 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
CDC6-202ENST00000473555 BHMG1C9JSJ3 638 aaPredicted RBP11.48□□□□□ -0.57
CDC6-202ENST00000473555 PTPN5P54829 565 aa11.47□□□□□ -0.57
CDC6-202ENST00000473555 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
CDC6-202ENST00000473555 MRPL50Q8N5N7 158 aaKnown RBP11.47□□□□□ -0.57
CDC6-202ENST00000473555 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
CDC6-202ENST00000473555 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
CDC6-202ENST00000473555 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
CDC6-202ENST00000473555 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
CDC6-202ENST00000473555 WNT2BQ93097 391 aa11.43□□□□□ -0.58
CDC6-202ENST00000473555 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
CDC6-202ENST00000473555 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
CDC6-202ENST00000473555 PHF14O94880 888 aa11.41□□□□□ -0.58
CDC6-202ENST00000473555 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
CDC6-202ENST00000473555 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
CDC6-202ENST00000473555 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
CDC6-202ENST00000473555 EPAS1Q99814 870 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 301.2 ms