RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 TMEM92Q6UXU6 159 aa15.79■□□□□ 0.12
A1CF-209ENST00000473480 CCDC180Q9P1Z9 1646 aa15.79■□□□□ 0.12
A1CF-209ENST00000473480 TMC2Q8TDI7 906 aa15.75■□□□□ 0.11
A1CF-209ENST00000473480 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
A1CF-209ENST00000473480 C2orf72A6NCS6 295 aa15.71■□□□□ 0.11
A1CF-209ENST00000473480 KIF3CO14782 793 aa15.71■□□□□ 0.11
A1CF-209ENST00000473480 SNPHO15079 494 aa15.69■□□□□ 0.1
A1CF-209ENST00000473480 GPHNQ9NQX3 736 aaPredicted RBP15.68■□□□□ 0.1
A1CF-209ENST00000473480 PDE4AP27815 886 aa15.66■□□□□ 0.1
A1CF-209ENST00000473480 CRISPLD2Q9H0B8 497 aa15.66■□□□□ 0.1
A1CF-209ENST00000473480 CADPS2Q86UW7 1296 aa15.65■□□□□ 0.1
A1CF-209ENST00000473480 NCKAP5LQ9HCH0 1330 aa15.64■□□□□ 0.09
A1CF-209ENST00000473480 FOXK1P85037 733 aa15.6■□□□□ 0.09
A1CF-209ENST00000473480 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
A1CF-209ENST00000473480 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.09
A1CF-209ENST00000473480 LARP6Q9BRS8 491 aaKnown RBP15.58■□□□□ 0.08
A1CF-209ENST00000473480 DSG2Q14126 1118 aa15.57■□□□□ 0.08
A1CF-209ENST00000473480 TSHZ2Q9NRE2 1034 aa15.57■□□□□ 0.08
A1CF-209ENST00000473480 HOXB3P14651 431 aaPredicted RBP15.56■□□□□ 0.08
A1CF-209ENST00000473480 FAM163AQ96GL9 167 aaPredicted RBP15.55■□□□□ 0.08
A1CF-209ENST00000473480 DDX27Q96GQ7 796 aaKnown RBP15.55■□□□□ 0.08
A1CF-209ENST00000473480 PLPP6Q8IY26 295 aa15.54■□□□□ 0.08
A1CF-209ENST00000473480 RIMBP2O15034 1052 aa15.53■□□□□ 0.08
A1CF-209ENST00000473480 MFSD10Q14728 455 aa15.53■□□□□ 0.08
A1CF-209ENST00000473480 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
A1CF-209ENST00000473480 ZNF710Q8N1W2 664 aa15.51■□□□□ 0.07
A1CF-209ENST00000473480 ST18O60284 1047 aa15.48■□□□□ 0.07
A1CF-209ENST00000473480 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
A1CF-209ENST00000473480 SLC34A2O95436 690 aa15.47■□□□□ 0.07
A1CF-209ENST00000473480 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
A1CF-209ENST00000473480 WDR70Q9NW82 654 aa15.44■□□□□ 0.06
A1CF-209ENST00000473480 LCE2DQ5TA82 110 aaPredicted RBP15.43■□□□□ 0.06
A1CF-209ENST00000473480 PTCD2Q8WV60 388 aaKnown RBP15.39■□□□□ 0.05
A1CF-209ENST00000473480 HOXB1P14653 301 aaPredicted RBP15.38■□□□□ 0.05
A1CF-209ENST00000473480 GPR153Q6NV75 609 aa15.38■□□□□ 0.05
A1CF-209ENST00000473480 PCDHGA4Q9Y5G9 962 aa15.36■□□□□ 0.05
A1CF-209ENST00000473480 TBC1D12O60347 775 aa15.35■□□□□ 0.05
A1CF-209ENST00000473480 ARSIQ5FYB1 569 aa15.35■□□□□ 0.05
A1CF-209ENST00000473480 CAMK2BQ13554 666 aa15.34■□□□□ 0.05
A1CF-209ENST00000473480 OXER1Q8TDS5 423 aa15.34■□□□□ 0.05
A1CF-209ENST00000473480 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
A1CF-209ENST00000473480 E2F4Q16254 413 aa15.31■□□□□ 0.04
A1CF-209ENST00000473480 MARVELD3Q96A59 401 aa15.31■□□□□ 0.04
A1CF-209ENST00000473480 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
A1CF-209ENST00000473480 EMP3P54852 163 aa15.3■□□□□ 0.04
A1CF-209ENST00000473480 EMILIN3Q9NT22 766 aa15.3■□□□□ 0.04
A1CF-209ENST00000473480 KHSRPQ92945 711 aaKnown RBP eCLIP15.28■□□□□ 0.043e-6■□□□□ 10.7
A1CF-209ENST00000473480 NUDT7P0C024 238 aa15.26■□□□□ 0.03
A1CF-209ENST00000473480 POTEMA6NI47 508 aa15.25■□□□□ 0.03
A1CF-209ENST00000473480 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
A1CF-209ENST00000473480 POTEGQ6S5H5 508 aa15.25■□□□□ 0.03
A1CF-209ENST00000473480 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
A1CF-209ENST00000473480 NACADO15069 1562 aa15.21■□□□□ 0.03
A1CF-209ENST00000473480 ERBB3P21860 1342 aa15.2■□□□□ 0.02
A1CF-209ENST00000473480 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
A1CF-209ENST00000473480 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
A1CF-209ENST00000473480 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
A1CF-209ENST00000473480 FAM205CA6NFA0 338 aa15.19■□□□□ 0.02
A1CF-209ENST00000473480 DPYSL4O14531 572 aa15.18■□□□□ 0.02
A1CF-209ENST00000473480 EVI5O60447 810 aa15.17■□□□□ 0.02
A1CF-209ENST00000473480 ARIH1Q9Y4X5 557 aaPredicted RBP15.17■□□□□ 0.02
A1CF-209ENST00000473480 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
A1CF-209ENST00000473480 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
A1CF-209ENST00000473480 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
A1CF-209ENST00000473480 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
A1CF-209ENST00000473480 HS3ST6Q96QI5 342 aa15.14■□□□□ 0.01
A1CF-209ENST00000473480 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
A1CF-209ENST00000473480 KCNV2Q8TDN2 545 aa15.13■□□□□ 0.01
A1CF-209ENST00000473480 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
A1CF-209ENST00000473480 PSDA5PKW4 1024 aaPredicted RBP15.12■□□□□ 0.01
A1CF-209ENST00000473480 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
A1CF-209ENST00000473480 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
A1CF-209ENST00000473480 SPDYE16A6NNV3 312 aaPredicted RBP15.09■□□□□ 0.01
A1CF-209ENST00000473480 PDIA6Q15084 440 aa15.09■□□□□ 0.01
A1CF-209ENST00000473480 POTEB3A0JP26 581 aa15.08■□□□□ 0
A1CF-209ENST00000473480 POTEBQ6S5H4 581 aa15.08■□□□□ 0
A1CF-209ENST00000473480 PCDH10Q9P2E7 1040 aa15.03■□□□□ -0
A1CF-209ENST00000473480 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
A1CF-209ENST00000473480 CDAN1Q8IWY9 1227 aa15.02■□□□□ -0
A1CF-209ENST00000473480 ZNF687Q8N1G0 1237 aa15.02■□□□□ -0
A1CF-209ENST00000473480 JPH4Q96JJ6 628 aa15.02■□□□□ -0
A1CF-209ENST00000473480 ZNF454Q8N9F8 522 aa15.01□□□□□ -0.01
A1CF-209ENST00000473480 PTGER2P43116 358 aa15□□□□□ -0.01
A1CF-209ENST00000473480 FOSBP53539 338 aa15□□□□□ -0.01
A1CF-209ENST00000473480 CUX2O14529 1486 aa14.99□□□□□ -0.01
A1CF-209ENST00000473480 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
A1CF-209ENST00000473480 PHF14O94880 888 aa14.96□□□□□ -0.01
A1CF-209ENST00000473480 DDX12PQ92771 950 aa14.94□□□□□ -0.02
A1CF-209ENST00000473480 PCDHGA10Q9Y5H3 936 aa14.94□□□□□ -0.02
A1CF-209ENST00000473480 PBX2P40425 430 aa14.93□□□□□ -0.02
A1CF-209ENST00000473480 ZDHHC16Q969W1 377 aa14.93□□□□□ -0.02
A1CF-209ENST00000473480 TYW1BQ6NUM6 668 aa14.92□□□□□ -0.02
A1CF-209ENST00000473480 FBXW7Q969H0 707 aa14.92□□□□□ -0.02
A1CF-209ENST00000473480 EPAS1Q99814 870 aa14.92□□□□□ -0.02
A1CF-209ENST00000473480 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
A1CF-209ENST00000473480 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
A1CF-209ENST00000473480 ARHGAP33O14559 1287 aa14.87□□□□□ -0.03
A1CF-209ENST00000473480 NBR1Q14596 966 aa14.87□□□□□ -0.03
A1CF-209ENST00000473480 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
A1CF-209ENST00000473480 KRTAP3-3Q9BYR6 98 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms