RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 MYO5CQ9NQX4 1742 aa26.15■■□□□ 1.78
PTK7-211ENST00000473339 YEATS2Q9ULM3 1422 aa26.13■■□□□ 1.77
PTK7-211ENST00000473339 ARHGEF40Q8TER5 1519 aa26.12■■□□□ 1.77
PTK7-211ENST00000473339 CDC42BPBQ9Y5S2 1711 aa26.1■■□□□ 1.77
PTK7-211ENST00000473339 ARHGAP5Q13017 1502 aa26.09■■□□□ 1.77
PTK7-211ENST00000473339 MAGI2Q86UL8 1455 aa26.09■■□□□ 1.77
PTK7-211ENST00000473339 ARHGEF12Q9NZN5 1544 aa26.08■■□□□ 1.77
PTK7-211ENST00000473339 AFAP1Q8N556 730 aa26.06■■□□□ 1.76
PTK7-211ENST00000473339 PREX2Q70Z35 1606 aa26.06■■□□□ 1.76
PTK7-211ENST00000473339 ADAMTSL3P82987 1691 aa26.06■■□□□ 1.76
PTK7-211ENST00000473339 SIGLEC1Q9BZZ2 1709 aa26.05■■□□□ 1.76
PTK7-211ENST00000473339 ZFYVE16Q7Z3T8 1539 aa26.04■■□□□ 1.76
PTK7-211ENST00000473339 GPATCH8Q9UKJ3 1502 aaKnown RBP26.04■■□□□ 1.76
PTK7-211ENST00000473339 KDM5CP41229 1560 aa26.03■■□□□ 1.76
PTK7-211ENST00000473339 CDC42BPAQ5VT25 1732 aa26.02■■□□□ 1.76
PTK7-211ENST00000473339 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
PTK7-211ENST00000473339 ZNF518AQ6AHZ1 1483 aa26■■□□□ 1.75
PTK7-211ENST00000473339 TRAPPC8Q9Y2L5 1435 aa26■■□□□ 1.75
PTK7-211ENST00000473339 ABCC1P33527 1531 aa25.99■■□□□ 1.75
PTK7-211ENST00000473339 ARID4BQ4LE39 1312 aaPredicted RBP25.96■■□□□ 1.75
PTK7-211ENST00000473339 ATP10AO60312 1499 aa25.96■■□□□ 1.75
PTK7-211ENST00000473339 PTPRMP28827 1452 aa25.96■■□□□ 1.75
PTK7-211ENST00000473339 MTUS2Q5JR59 1369 aa25.95■■□□□ 1.75
PTK7-211ENST00000473339 MLH3Q9UHC1 1453 aa25.93■■□□□ 1.74
PTK7-211ENST00000473339 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
PTK7-211ENST00000473339 SAMD9LQ8IVG5 1584 aa25.93■■□□□ 1.74
PTK7-211ENST00000473339 MADDQ8WXG6 1647 aa25.92■■□□□ 1.74
PTK7-211ENST00000473339 C9orf84Q5VXU9 1444 aa25.9■■□□□ 1.74
PTK7-211ENST00000473339 EHBP1L1Q8N3D4 1523 aa25.9■■□□□ 1.74
PTK7-211ENST00000473339 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
PTK7-211ENST00000473339 CCNB3Q8WWL7 1395 aa25.89■■□□□ 1.74
PTK7-211ENST00000473339 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
PTK7-211ENST00000473339 TIAM1Q13009 1591 aa25.87■■□□□ 1.73
PTK7-211ENST00000473339 HECW2Q9P2P5 1572 aa25.87■■□□□ 1.73
PTK7-211ENST00000473339 DIP2CQ9Y2E4 1556 aa25.87■■□□□ 1.73
PTK7-211ENST00000473339 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
PTK7-211ENST00000473339 ZNF777Q9ULD5 760 aaPredicted RBP25.87■■□□□ 1.73
PTK7-211ENST00000473339 HNRNPMP52272 730 aaKnown RBP eCLIP25.86■■□□□ 1.73
PTK7-211ENST00000473339 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
PTK7-211ENST00000473339 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
PTK7-211ENST00000473339 ABCA6Q8N139 1617 aa25.84■■□□□ 1.73
PTK7-211ENST00000473339 REREQ9P2R6 1566 aa25.82■■□□□ 1.72
PTK7-211ENST00000473339 KIDINS220Q9ULH0 1771 aa25.82■■□□□ 1.72
PTK7-211ENST00000473339 NCOA2Q15596 1464 aa25.81■■□□□ 1.72
PTK7-211ENST00000473339 MBD5Q9P267 1494 aa25.8■■□□□ 1.72
PTK7-211ENST00000473339 MLECQ14165 292 aa25.8■■□□□ 1.72
PTK7-211ENST00000473339 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
PTK7-211ENST00000473339 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
PTK7-211ENST00000473339 PLEKHH2Q8IVE3 1493 aa25.78■■□□□ 1.72
PTK7-211ENST00000473339 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
PTK7-211ENST00000473339 RIMS1Q86UR5 1692 aaKnown RBP25.77■■□□□ 1.72
PTK7-211ENST00000473339 AGLP35573 1532 aa25.75■■□□□ 1.71
PTK7-211ENST00000473339 SPAG9O60271 1321 aaKnown RBP25.73■■□□□ 1.71
PTK7-211ENST00000473339 MYT1LQ9UL68 1186 aa25.72■■□□□ 1.71
PTK7-211ENST00000473339 SUPT6HQ7KZ85 1726 aaKnown RBP25.71■■□□□ 1.71
PTK7-211ENST00000473339 INO80Q9ULG1 1556 aaPredicted RBP25.7■■□□□ 1.71
PTK7-211ENST00000473339 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
PTK7-211ENST00000473339 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
PTK7-211ENST00000473339 FER1L4A9Z1Z3 1794 aa25.68■■□□□ 1.7
PTK7-211ENST00000473339 CEBPAP49715 358 aaPredicted RBP25.64■■□□□ 1.7
PTK7-211ENST00000473339 CAMSAP2Q08AD1 1489 aa25.64■■□□□ 1.69
PTK7-211ENST00000473339 PLXNC1O60486 1568 aa25.64■■□□□ 1.69
PTK7-211ENST00000473339 RTEL1-TNFRSF6BF6WH68 1400 aa25.63■■□□□ 1.69
PTK7-211ENST00000473339 A2MP01023 1474 aa25.6■■□□□ 1.69
PTK7-211ENST00000473339 PLPPR3Q6T4P5 718 aa25.6■■□□□ 1.69
PTK7-211ENST00000473339 CCDC141Q6ZP82 1450 aa25.58■■□□□ 1.69
PTK7-211ENST00000473339 RSPH4AQ5TD94 716 aa25.56■■□□□ 1.68
PTK7-211ENST00000473339 MYOM3Q5VTT5 1437 aa25.55■■□□□ 1.68
PTK7-211ENST00000473339 ARHGEF5Q12774 1597 aa25.55■■□□□ 1.68
PTK7-211ENST00000473339 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
PTK7-211ENST00000473339 HSPA2P54652 639 aa25.53■■□□□ 1.68
PTK7-211ENST00000473339 DHX29Q7Z478 1369 aaKnown RBP25.53■■□□□ 1.68
PTK7-211ENST00000473339 C3P01024 1663 aa25.49■■□□□ 1.67
PTK7-211ENST00000473339 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
PTK7-211ENST00000473339 CNTLNQ9NXG0 1405 aa25.49■■□□□ 1.67
PTK7-211ENST00000473339 ZMYM3Q14202 1370 aa25.46■■□□□ 1.67
PTK7-211ENST00000473339 GGT6Q6P531 493 aa25.44■■□□□ 1.66
PTK7-211ENST00000473339 APLP2Q06481 763 aa25.43■■□□□ 1.66
PTK7-211ENST00000473339 TSPY4P0CV99 314 aa25.42■■□□□ 1.66
PTK7-211ENST00000473339 TSPY10P0CW01 314 aa25.42■■□□□ 1.66
PTK7-211ENST00000473339 PPP6R1Q9UPN7 881 aa25.42■■□□□ 1.66
PTK7-211ENST00000473339 MAST1Q9Y2H9 1570 aa25.42■■□□□ 1.66
PTK7-211ENST00000473339 PREX1Q8TCU6 1659 aa25.42■■□□□ 1.66
PTK7-211ENST00000473339 ESF1Q9H501 851 aaKnown RBP25.41■■□□□ 1.66
PTK7-211ENST00000473339 MROH2AA6NES4 1674 aa25.4■■□□□ 1.66
PTK7-211ENST00000473339 SETD1BQ9UPS6 1966 aaKnown RBP25.4■■□□□ 1.66
PTK7-211ENST00000473339 ABCC5O15440 1437 aa25.38■■□□□ 1.65
PTK7-211ENST00000473339 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
PTK7-211ENST00000473339 NPATQ14207 1427 aa25.37■■□□□ 1.65
PTK7-211ENST00000473339 UHRF1BP1Q6BDS2 1440 aa25.37■■□□□ 1.65
PTK7-211ENST00000473339 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
PTK7-211ENST00000473339 KIF3BO15066 747 aa25.37■■□□□ 1.65
PTK7-211ENST00000473339 CLTCQ00610 1675 aaKnown RBP25.36■■□□□ 1.65
PTK7-211ENST00000473339 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
PTK7-211ENST00000473339 PTPN23Q9H3S7 1636 aa25.35■■□□□ 1.65
PTK7-211ENST00000473339 SHANK2Q9UPX8 1470 aa25.29■■□□□ 1.64
PTK7-211ENST00000473339 ILDR1Q86SU0 546 aaPredicted RBP25.29■■□□□ 1.64
PTK7-211ENST00000473339 DAPK1P53355 1430 aa25.29■■□□□ 1.64
PTK7-211ENST00000473339 STRCQ7RTU9 1775 aa25.28■■□□□ 1.64
PTK7-211ENST00000473339 FAM135AQ9P2D6 1515 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms