RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 CCDC7Q96M83 1385 aa28.31■■■□□ 2.12
FSCN1-205ENST00000473330 ANKRD30BQ9BXX2 1392 aa28.31■■■□□ 2.12
FSCN1-205ENST00000473330 ROCK1Q13464 1354 aa28.31■■■□□ 2.12
FSCN1-205ENST00000473330 RPRD2Q5VT52 1461 aaKnown RBP28.29■■■□□ 2.12
FSCN1-205ENST00000473330 IRX6P78412 446 aaPredicted RBP28.28■■■□□ 2.12
FSCN1-205ENST00000473330 NBPF8Q3BBV2 869 aa28.27■■■□□ 2.12
FSCN1-205ENST00000473330 PRKRIP1Q9H875 184 aaPredicted RBP28.27■■■□□ 2.12
FSCN1-205ENST00000473330 ABCC5O15440 1437 aa28.26■■■□□ 2.11
FSCN1-205ENST00000473330 TEX14Q8IWB6 1497 aa28.26■■■□□ 2.11
FSCN1-205ENST00000473330 DNMT1P26358 1616 aaKnown RBP28.26■■■□□ 2.11
FSCN1-205ENST00000473330 ZNF644Q9H582 1327 aaPredicted RBP28.2■■■□□ 2.11
FSCN1-205ENST00000473330 SPATA31E1Q6ZUB1 1445 aa28.2■■■□□ 2.1
FSCN1-205ENST00000473330 ERICH6BQ5W0A0 696 aa28.18■■■□□ 2.1
FSCN1-205ENST00000473330 KIAA0556O60303 1618 aa28.18■■■□□ 2.1
FSCN1-205ENST00000473330 DISP1Q96F81 1524 aa28.18■■■□□ 2.1
FSCN1-205ENST00000473330 NUP153P49790 1475 aaKnown RBP28.17■■■□□ 2.1
FSCN1-205ENST00000473330 FAM9BQ8IZU0 186 aa28.16■■■□□ 2.1
FSCN1-205ENST00000473330 SLC4A1APQ9BWU0 796 aaKnown RBP28.16■■■□□ 2.1
FSCN1-205ENST00000473330 KIF7Q2M1P5 1343 aa28.16■■■□□ 2.1
FSCN1-205ENST00000473330 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
FSCN1-205ENST00000473330 MRS2Q9HD23 443 aa28.15■■■□□ 2.1
FSCN1-205ENST00000473330 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
FSCN1-205ENST00000473330 CDK11AQ9UQ88 783 aaPredicted RBP28.15■■■□□ 2.1
FSCN1-205ENST00000473330 KIAA0586Q9BVV6 1533 aa28.13■■■□□ 2.09
FSCN1-205ENST00000473330 MSH5O43196 834 aa28.12■■■□□ 2.09
FSCN1-205ENST00000473330 RAPGEF6Q8TEU7 1601 aa28.11■■■□□ 2.09
FSCN1-205ENST00000473330 ZBED9Q6R2W3 1325 aa28.11■■■□□ 2.09
FSCN1-205ENST00000473330 PPP4R2Q9NY27 417 aa28.1■■■□□ 2.09
FSCN1-205ENST00000473330 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
FSCN1-205ENST00000473330 PZPP20742 1482 aa28.09■■■□□ 2.09
FSCN1-205ENST00000473330 FANCIQ9NVI1 1328 aa28.07■■■□□ 2.08
FSCN1-205ENST00000473330 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
FSCN1-205ENST00000473330 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
FSCN1-205ENST00000473330 PRG4Q92954 1404 aaPredicted RBP28.01■■■□□ 2.08
FSCN1-205ENST00000473330 MBD5Q9P267 1494 aa28.01■■■□□ 2.07
FSCN1-205ENST00000473330 TROQ12816 1431 aaPredicted RBP27.99■■■□□ 2.07
FSCN1-205ENST00000473330 ADGBQ8N7X0 1667 aa27.99■■■□□ 2.07
FSCN1-205ENST00000473330 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
FSCN1-205ENST00000473330 CFDP1Q9UEE9 299 aaPredicted RBP27.97■■■□□ 2.07
FSCN1-205ENST00000473330 DHX29Q7Z478 1369 aaKnown RBP27.97■■■□□ 2.07
FSCN1-205ENST00000473330 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
FSCN1-205ENST00000473330 KIAA1107Q9UPP5 1409 aa27.96■■■□□ 2.07
FSCN1-205ENST00000473330 GPATCH8Q9UKJ3 1502 aaKnown RBP27.96■■■□□ 2.07
FSCN1-205ENST00000473330 BCORL1Q5H9F3 1711 aa27.94■■■□□ 2.06
FSCN1-205ENST00000473330 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
FSCN1-205ENST00000473330 B4GALNT3Q6L9W6 998 aa27.92■■■□□ 2.06
FSCN1-205ENST00000473330 USP47Q96K76 1375 aa27.92■■■□□ 2.06
FSCN1-205ENST00000473330 CROCC2H7BZ55 1655 aa27.92■■■□□ 2.06
FSCN1-205ENST00000473330 KIF14Q15058 1648 aa27.9■■■□□ 2.06
FSCN1-205ENST00000473330 ADCY10Q96PN6 1610 aa27.9■■■□□ 2.06
FSCN1-205ENST00000473330 PLB1Q6P1J6 1458 aa27.89■■■□□ 2.05
FSCN1-205ENST00000473330 PKD2Q13563 968 aa27.88■■■□□ 2.05
FSCN1-205ENST00000473330 EIF4G3O43432 1585 aaKnown RBP27.87■■■□□ 2.05
FSCN1-205ENST00000473330 ZNF777Q9ULD5 760 aaPredicted RBP27.87■■■□□ 2.05
FSCN1-205ENST00000473330 KDM5CP41229 1560 aa27.87■■■□□ 2.05
FSCN1-205ENST00000473330 SMG6Q86US8 1419 aaKnown RBP27.86■■■□□ 2.05
FSCN1-205ENST00000473330 ZNF326Q5BKZ1 582 aaKnown RBP27.86■■■□□ 2.05
FSCN1-205ENST00000473330 ANKRD30AQ9BXX3 1397 aa27.84■■■□□ 2.05
FSCN1-205ENST00000473330 ARID4BQ4LE39 1312 aaPredicted RBP27.83■■■□□ 2.05
FSCN1-205ENST00000473330 POLR3GLQ9BT43 218 aa27.82■■■□□ 2.04
FSCN1-205ENST00000473330 ANKRD50Q9ULJ7 1429 aa27.81■■■□□ 2.04
FSCN1-205ENST00000473330 CEP170Q5SW79 1584 aa27.81■■■□□ 2.04
FSCN1-205ENST00000473330 CNGB1Q14028 1251 aaPredicted RBP27.8■■■□□ 2.04
FSCN1-205ENST00000473330 UHRF1BP1Q6BDS2 1440 aa27.8■■■□□ 2.04
FSCN1-205ENST00000473330 NUDCQ9Y266 331 aa27.77■■■□□ 2.04
FSCN1-205ENST00000473330 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.04
FSCN1-205ENST00000473330 RNF123Q5XPI4 1314 aa27.75■■■□□ 2.03
FSCN1-205ENST00000473330 ERICH6Q7L0X2 663 aa27.75■■■□□ 2.03
FSCN1-205ENST00000473330 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
FSCN1-205ENST00000473330 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
FSCN1-205ENST00000473330 ROCK2O75116 1388 aaKnown RBP27.73■■■□□ 2.03
FSCN1-205ENST00000473330 CDC42BPAQ5VT25 1732 aa27.73■■■□□ 2.03
FSCN1-205ENST00000473330 PNISRQ8TF01 805 aaKnown RBP27.72■■■□□ 2.03
FSCN1-205ENST00000473330 NUP155O75694 1391 aa27.72■■■□□ 2.03
FSCN1-205ENST00000473330 BCL11AQ9H165 835 aa27.72■■■□□ 2.03
FSCN1-205ENST00000473330 SYNJ2O15056 1496 aa27.71■■■□□ 2.03
FSCN1-205ENST00000473330 SHANK2Q9UPX8 1470 aa27.7■■■□□ 2.03
FSCN1-205ENST00000473330 ARHGEF12Q9NZN5 1544 aa27.7■■■□□ 2.03
FSCN1-205ENST00000473330 CARMIL2Q6F5E8 1435 aa27.7■■■□□ 2.02
FSCN1-205ENST00000473330 C9orf84Q5VXU9 1444 aa27.69■■■□□ 2.02
FSCN1-205ENST00000473330 CARD11Q9BXL7 1154 aa27.69■■■□□ 2.02
FSCN1-205ENST00000473330 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
FSCN1-205ENST00000473330 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
FSCN1-205ENST00000473330 JPH4Q96JJ6 628 aa27.66■■■□□ 2.02
FSCN1-205ENST00000473330 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
FSCN1-205ENST00000473330 TMC1Q8TDI8 760 aa27.64■■■□□ 2.02
FSCN1-205ENST00000473330 KIF15Q9NS87 1388 aa27.64■■■□□ 2.02
FSCN1-205ENST00000473330 NUP160Q12769 1436 aa27.63■■■□□ 2.01
FSCN1-205ENST00000473330 ABCA8O94911 1581 aa27.62■■■□□ 2.01
FSCN1-205ENST00000473330 SENP3-EIF4A1A0A087X0R7 540 aa27.62■■■□□ 2.01
FSCN1-205ENST00000473330 FBLN2P98095 1184 aa27.62■■■□□ 2.01
FSCN1-205ENST00000473330 ST20-MTHFSA0A0A6YYL1 179 aa27.61■■■□□ 2.01
FSCN1-205ENST00000473330 ATP10BO94823 1461 aa27.61■■■□□ 2.01
FSCN1-205ENST00000473330 KDM2AQ9Y2K7 1162 aa27.6■■■□□ 2.01
FSCN1-205ENST00000473330 PTPRGP23470 1445 aa27.6■■■□□ 2.01
FSCN1-205ENST00000473330 LRPPRCP42704 1394 aaKnown RBP27.6■■■□□ 2.01
FSCN1-205ENST00000473330 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
FSCN1-205ENST00000473330 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
FSCN1-205ENST00000473330 CCDC136Q96JN2 1154 aa27.58■■■□□ 2.01
FSCN1-205ENST00000473330 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms