RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 EPRSP07814 1512 aaKnown RBP13.68□□□□□ -0.22
LSAMP-202ENST00000473171 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
LSAMP-202ENST00000473171 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
LSAMP-202ENST00000473171 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
LSAMP-202ENST00000473171 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
LSAMP-202ENST00000473171 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
LSAMP-202ENST00000473171 DISP1Q96F81 1524 aa13.64□□□□□ -0.23
LSAMP-202ENST00000473171 KDM5BQ9UGL1 1544 aa13.63□□□□□ -0.23
LSAMP-202ENST00000473171 MAP3K4Q9Y6R4 1608 aa13.62□□□□□ -0.23
LSAMP-202ENST00000473171 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
LSAMP-202ENST00000473171 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
LSAMP-202ENST00000473171 MIER1Q8N108 512 aa13.59□□□□□ -0.23
LSAMP-202ENST00000473171 ZCCHC11Q5TAX3 1644 aaKnown RBP13.58□□□□□ -0.24
LSAMP-202ENST00000473171 WDR7Q9Y4E6 1490 aa13.58□□□□□ -0.24
LSAMP-202ENST00000473171 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
LSAMP-202ENST00000473171 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
LSAMP-202ENST00000473171 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
LSAMP-202ENST00000473171 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
LSAMP-202ENST00000473171 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
LSAMP-202ENST00000473171 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
LSAMP-202ENST00000473171 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
LSAMP-202ENST00000473171 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
LSAMP-202ENST00000473171 MAGI3Q5TCQ9 1506 aa13.5□□□□□ -0.25
LSAMP-202ENST00000473171 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
LSAMP-202ENST00000473171 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
LSAMP-202ENST00000473171 KIF21BO75037 1637 aa13.48□□□□□ -0.25
LSAMP-202ENST00000473171 EVX2Q03828 476 aa13.46□□□□□ -0.25
LSAMP-202ENST00000473171 PTPRMP28827 1452 aa13.43□□□□□ -0.26
LSAMP-202ENST00000473171 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
LSAMP-202ENST00000473171 CFAP43Q8NDM7 1665 aa13.43□□□□□ -0.26
LSAMP-202ENST00000473171 ABCA8O94911 1581 aa13.42□□□□□ -0.26
LSAMP-202ENST00000473171 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
LSAMP-202ENST00000473171 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
LSAMP-202ENST00000473171 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
LSAMP-202ENST00000473171 ARAP3Q8WWN8 1544 aa13.4□□□□□ -0.26
LSAMP-202ENST00000473171 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
LSAMP-202ENST00000473171 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
LSAMP-202ENST00000473171 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
LSAMP-202ENST00000473171 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
LSAMP-202ENST00000473171 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
LSAMP-202ENST00000473171 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
LSAMP-202ENST00000473171 PCF11O94913 1555 aaKnown RBP13.36□□□□□ -0.27
LSAMP-202ENST00000473171 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
LSAMP-202ENST00000473171 HSPA2P54652 639 aa13.35□□□□□ -0.27
LSAMP-202ENST00000473171 ATP10BO94823 1461 aa13.35□□□□□ -0.27
LSAMP-202ENST00000473171 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
LSAMP-202ENST00000473171 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
LSAMP-202ENST00000473171 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
LSAMP-202ENST00000473171 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
LSAMP-202ENST00000473171 NEO1Q92859 1461 aa13.29□□□□□ -0.28
LSAMP-202ENST00000473171 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
LSAMP-202ENST00000473171 ABCA9Q8IUA7 1624 aa13.29□□□□□ -0.28
LSAMP-202ENST00000473171 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
LSAMP-202ENST00000473171 BCORL1Q5H9F3 1711 aa13.29□□□□□ -0.28
LSAMP-202ENST00000473171 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
LSAMP-202ENST00000473171 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
LSAMP-202ENST00000473171 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
LSAMP-202ENST00000473171 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
LSAMP-202ENST00000473171 ARHGEF40Q8TER5 1519 aa13.24□□□□□ -0.29
LSAMP-202ENST00000473171 MLECQ14165 292 aa13.24□□□□□ -0.29
LSAMP-202ENST00000473171 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
LSAMP-202ENST00000473171 GABBR2O75899 941 aa13.23□□□□□ -0.29
LSAMP-202ENST00000473171 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
LSAMP-202ENST00000473171 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
LSAMP-202ENST00000473171 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
LSAMP-202ENST00000473171 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.29
LSAMP-202ENST00000473171 CLCN6P51797 869 aa13.21□□□□□ -0.29
LSAMP-202ENST00000473171 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
LSAMP-202ENST00000473171 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.3
LSAMP-202ENST00000473171 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.3
LSAMP-202ENST00000473171 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
LSAMP-202ENST00000473171 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
LSAMP-202ENST00000473171 FANCAO15360 1455 aa13.19□□□□□ -0.3
LSAMP-202ENST00000473171 POGZQ7Z3K3 1410 aa13.19□□□□□ -0.3
LSAMP-202ENST00000473171 PHF12Q96QT6 1004 aa13.18□□□□□ -0.3
LSAMP-202ENST00000473171 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
LSAMP-202ENST00000473171 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
LSAMP-202ENST00000473171 NUBP1P53384 320 aa13.17□□□□□ -0.3
LSAMP-202ENST00000473171 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
LSAMP-202ENST00000473171 ZFYVE16Q7Z3T8 1539 aa13.17□□□□□ -0.3
LSAMP-202ENST00000473171 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
LSAMP-202ENST00000473171 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
LSAMP-202ENST00000473171 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
LSAMP-202ENST00000473171 SOCS7O14512 581 aa13.14□□□□□ -0.31
LSAMP-202ENST00000473171 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
LSAMP-202ENST00000473171 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
LSAMP-202ENST00000473171 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
LSAMP-202ENST00000473171 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
LSAMP-202ENST00000473171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.31
LSAMP-202ENST00000473171 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
LSAMP-202ENST00000473171 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
LSAMP-202ENST00000473171 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
LSAMP-202ENST00000473171 SCAPERQ9BY12 1400 aa13.11□□□□□ -0.31
LSAMP-202ENST00000473171 HECW1Q76N89 1606 aa13.1□□□□□ -0.31
LSAMP-202ENST00000473171 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
LSAMP-202ENST00000473171 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
LSAMP-202ENST00000473171 CFAP74Q9C0B2 1584 aa13.09□□□□□ -0.31
LSAMP-202ENST00000473171 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.32
LSAMP-202ENST00000473171 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
LSAMP-202ENST00000473171 FER1L4A9Z1Z3 1794 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms