RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ABCC2Q92887 1545 aa14.73□□□□□ -0.05
SMC4-214ENST00000472991 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
SMC4-214ENST00000472991 RAPGEF6Q8TEU7 1601 aa14.73□□□□□ -0.05
SMC4-214ENST00000472991 PLB1Q6P1J6 1458 aa14.71□□□□□ -0.05
SMC4-214ENST00000472991 UACAQ9BZF9 1416 aa14.71□□□□□ -0.05
SMC4-214ENST00000472991 UHRF1BP1LA0JNW5 1464 aa14.7□□□□□ -0.06
SMC4-214ENST00000472991 CLIP1P30622 1438 aa14.7□□□□□ -0.06
SMC4-214ENST00000472991 PROM2Q8N271 834 aa14.7□□□□□ -0.06
SMC4-214ENST00000472991 ZCCHC11Q5TAX3 1644 aaKnown RBP14.7□□□□□ -0.06
SMC4-214ENST00000472991 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
SMC4-214ENST00000472991 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
SMC4-214ENST00000472991 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
SMC4-214ENST00000472991 LRRIQ1Q96JM4 1722 aa14.65□□□□□ -0.06
SMC4-214ENST00000472991 PCF11O94913 1555 aaKnown RBP14.64□□□□□ -0.07
SMC4-214ENST00000472991 HECW1Q76N89 1606 aa14.64□□□□□ -0.07
SMC4-214ENST00000472991 MAPKBP1O60336 1514 aa14.64□□□□□ -0.07
SMC4-214ENST00000472991 KDM5BQ9UGL1 1544 aa14.64□□□□□ -0.07
SMC4-214ENST00000472991 FMN1Q68DA7 1419 aa14.64□□□□□ -0.07
SMC4-214ENST00000472991 KIF13AQ9H1H9 1805 aa14.64□□□□□ -0.07
SMC4-214ENST00000472991 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
SMC4-214ENST00000472991 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMC4-214ENST00000472991 DIP2BQ9P265 1576 aa14.57□□□□□ -0.08
SMC4-214ENST00000472991 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
SMC4-214ENST00000472991 ATP10BO94823 1461 aa14.57□□□□□ -0.08
SMC4-214ENST00000472991 ASXL2Q76L83 1435 aa14.56□□□□□ -0.08
SMC4-214ENST00000472991 CDK13Q14004 1512 aaKnown RBP14.56□□□□□ -0.08
SMC4-214ENST00000472991 CASKIN1Q8WXD9 1431 aa14.55□□□□□ -0.08
SMC4-214ENST00000472991 FYCO1Q9BQS8 1478 aa14.55□□□□□ -0.08
SMC4-214ENST00000472991 EPRSP07814 1512 aaKnown RBP14.54□□□□□ -0.08
SMC4-214ENST00000472991 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
SMC4-214ENST00000472991 TSPOAP1O95153 1857 aa14.52□□□□□ -0.08
SMC4-214ENST00000472991 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
SMC4-214ENST00000472991 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.09
SMC4-214ENST00000472991 ABCC10Q5T3U5 1492 aa14.51□□□□□ -0.09
SMC4-214ENST00000472991 CFAP43Q8NDM7 1665 aa14.5□□□□□ -0.09
SMC4-214ENST00000472991 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
SMC4-214ENST00000472991 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
SMC4-214ENST00000472991 GLI2P10070 1586 aa14.48□□□□□ -0.09
SMC4-214ENST00000472991 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
SMC4-214ENST00000472991 GABBR2O75899 941 aa14.47□□□□□ -0.09
SMC4-214ENST00000472991 MNX1P50219 401 aaPredicted RBP14.46□□□□□ -0.09
SMC4-214ENST00000472991 PPRC1Q5VV67 1664 aaKnown RBP14.46□□□□□ -0.1
SMC4-214ENST00000472991 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
SMC4-214ENST00000472991 MAGI3Q5TCQ9 1506 aa14.43□□□□□ -0.1
SMC4-214ENST00000472991 FAM69CQ0P6D2 419 aa14.43□□□□□ -0.1
SMC4-214ENST00000472991 KIF14Q15058 1648 aa14.43□□□□□ -0.1
SMC4-214ENST00000472991 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
SMC4-214ENST00000472991 TTC37Q6PGP7 1564 aa14.42□□□□□ -0.1
SMC4-214ENST00000472991 FKBP8Q14318 412 aa14.41□□□□□ -0.1
SMC4-214ENST00000472991 KCNH8Q96L42 1107 aa14.41□□□□□ -0.1
SMC4-214ENST00000472991 PLEKHD1A6NEE1 506 aa14.4□□□□□ -0.1
SMC4-214ENST00000472991 MYO5CQ9NQX4 1742 aa14.4□□□□□ -0.1
SMC4-214ENST00000472991 TROQ12816 1431 aaPredicted RBP14.4□□□□□ -0.1
SMC4-214ENST00000472991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.111e-7■■■□□ 17.3
SMC4-214ENST00000472991 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
SMC4-214ENST00000472991 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
SMC4-214ENST00000472991 CDC42BPAQ5VT25 1732 aa14.36□□□□□ -0.11
SMC4-214ENST00000472991 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
SMC4-214ENST00000472991 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
SMC4-214ENST00000472991 MAP3K1Q13233 1512 aa14.35□□□□□ -0.11
SMC4-214ENST00000472991 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
SMC4-214ENST00000472991 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
SMC4-214ENST00000472991 CDC42BPBQ9Y5S2 1711 aa14.34□□□□□ -0.11
SMC4-214ENST00000472991 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
SMC4-214ENST00000472991 PREX2Q70Z35 1606 aa14.33□□□□□ -0.11
SMC4-214ENST00000472991 TEX14Q8IWB6 1497 aa14.31□□□□□ -0.12
SMC4-214ENST00000472991 CFAP74Q9C0B2 1584 aa14.31□□□□□ -0.12
SMC4-214ENST00000472991 CLCN6P51797 869 aa14.31□□□□□ -0.12
SMC4-214ENST00000472991 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
SMC4-214ENST00000472991 KDM6BO15054 1643 aa14.3□□□□□ -0.12
SMC4-214ENST00000472991 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
SMC4-214ENST00000472991 ARAP3Q8WWN8 1544 aa14.27□□□□□ -0.12
SMC4-214ENST00000472991 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
SMC4-214ENST00000472991 NCOA2Q15596 1464 aa14.25□□□□□ -0.13
SMC4-214ENST00000472991 PLCH2O75038 1416 aa14.25□□□□□ -0.13
SMC4-214ENST00000472991 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
SMC4-214ENST00000472991 FANCAO15360 1455 aa14.25□□□□□ -0.13
SMC4-214ENST00000472991 NEO1Q92859 1461 aa14.25□□□□□ -0.13
SMC4-214ENST00000472991 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
SMC4-214ENST00000472991 MIER1Q8N108 512 aa14.24□□□□□ -0.13
SMC4-214ENST00000472991 GPATCH8Q9UKJ3 1502 aaKnown RBP14.22□□□□□ -0.13
SMC4-214ENST00000472991 RICTORQ6R327 1708 aa14.22□□□□□ -0.13
SMC4-214ENST00000472991 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
SMC4-214ENST00000472991 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
SMC4-214ENST00000472991 POTEIP0CG38 1075 aa14.2□□□□□ -0.14
SMC4-214ENST00000472991 FRMPD1Q5SYB0 1578 aa14.2□□□□□ -0.14
SMC4-214ENST00000472991 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
SMC4-214ENST00000472991 AKNAQ7Z591 1439 aa14.19□□□□□ -0.14
SMC4-214ENST00000472991 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
SMC4-214ENST00000472991 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
SMC4-214ENST00000472991 ABCC1P33527 1531 aa14.19□□□□□ -0.14
SMC4-214ENST00000472991 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
SMC4-214ENST00000472991 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
SMC4-214ENST00000472991 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
SMC4-214ENST00000472991 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
SMC4-214ENST00000472991 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
SMC4-214ENST00000472991 MYOM3Q5VTT5 1437 aa14.15□□□□□ -0.14
SMC4-214ENST00000472991 DENND4BO75064 1496 aaPredicted RBP14.14□□□□□ -0.15
SMC4-214ENST00000472991 PLCD3Q8N3E9 789 aa14.14□□□□□ -0.15
SMC4-214ENST00000472991 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms