RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 GPATCH8Q9UKJ3 1502 aaKnown RBP32.5■■■□□ 2.79
TOP3A-204ENST00000472959 ARHGAP5Q13017 1502 aa32.49■■■□□ 2.79
TOP3A-204ENST00000472959 NCOA2Q15596 1464 aa32.48■■■□□ 2.79
TOP3A-204ENST00000472959 SUPT6HQ7KZ85 1726 aaKnown RBP32.46■■■□□ 2.79
TOP3A-204ENST00000472959 PREX2Q70Z35 1606 aa32.44■■■□□ 2.78
TOP3A-204ENST00000472959 CFDP1Q9UEE9 299 aaPredicted RBP32.44■■■□□ 2.78
TOP3A-204ENST00000472959 DENND4BO75064 1496 aaPredicted RBP32.41■■■□□ 2.78
TOP3A-204ENST00000472959 ADGRL1O94910 1474 aa32.41■■■□□ 2.78
TOP3A-204ENST00000472959 CDC42BPAQ5VT25 1732 aa32.4■■■□□ 2.78
TOP3A-204ENST00000472959 CDC42BPBQ9Y5S2 1711 aa32.4■■■□□ 2.78
TOP3A-204ENST00000472959 RAPGEF3O95398 923 aa32.39■■■□□ 2.78
TOP3A-204ENST00000472959 SCAPERQ9BY12 1400 aa32.39■■■□□ 2.78
TOP3A-204ENST00000472959 ZNF777Q9ULD5 760 aaPredicted RBP32.35■■■□□ 2.77
TOP3A-204ENST00000472959 ITSN2Q9NZM3 1697 aa32.31■■■□□ 2.76
TOP3A-204ENST00000472959 POGZQ7Z3K3 1410 aa32.29■■■□□ 2.76
TOP3A-204ENST00000472959 PLEKHH2Q8IVE3 1493 aa32.29■■■□□ 2.76
TOP3A-204ENST00000472959 KIAA1107Q9UPP5 1409 aa32.27■■■□□ 2.76
TOP3A-204ENST00000472959 ABCC1P33527 1531 aa32.26■■■□□ 2.76
TOP3A-204ENST00000472959 MYOM3Q5VTT5 1437 aa32.26■■■□□ 2.75
TOP3A-204ENST00000472959 FRMPD1Q5SYB0 1578 aa32.25■■■□□ 2.75
TOP3A-204ENST00000472959 SAMD9LQ8IVG5 1584 aa32.24■■■□□ 2.75
TOP3A-204ENST00000472959 ZNF518AQ6AHZ1 1483 aa32.23■■■□□ 2.75
TOP3A-204ENST00000472959 MIA2Q96PC5 1412 aa32.23■■■□□ 2.75
TOP3A-204ENST00000472959 ZNF644Q9H582 1327 aaPredicted RBP32.23■■■□□ 2.75
TOP3A-204ENST00000472959 ARHGEF12Q9NZN5 1544 aa32.22■■■□□ 2.75
TOP3A-204ENST00000472959 AFAP1Q8N556 730 aa32.22■■■□□ 2.75
TOP3A-204ENST00000472959 RICTORQ6R327 1708 aa32.22■■■□□ 2.75
TOP3A-204ENST00000472959 HNRNPMP52272 730 aaKnown RBP eCLIP32.2■■■□□ 2.75
TOP3A-204ENST00000472959 ZMYM4Q5VZL5 1548 aa32.19■■■□□ 2.74
TOP3A-204ENST00000472959 TRAPPC8Q9Y2L5 1435 aa32.18■■■□□ 2.74
TOP3A-204ENST00000472959 MAGI2Q86UL8 1455 aa32.18■■■□□ 2.74
TOP3A-204ENST00000472959 SYCP2Q9BX26 1530 aa32.16■■■□□ 2.74
TOP3A-204ENST00000472959 AEBP2Q6ZN18 517 aaPredicted RBP32.14■■■□□ 2.74
TOP3A-204ENST00000472959 CAMSAP2Q08AD1 1489 aa32.14■■■□□ 2.74
TOP3A-204ENST00000472959 KDM5CP41229 1560 aa32.13■■■□□ 2.73
TOP3A-204ENST00000472959 RSPH4AQ5TD94 716 aa32.13■■■□□ 2.73
TOP3A-204ENST00000472959 MBD5Q9P267 1494 aa32.11■■■□□ 2.73
TOP3A-204ENST00000472959 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
TOP3A-204ENST00000472959 FGD6Q6ZV73 1430 aa32.09■■■□□ 2.73
TOP3A-204ENST00000472959 MLH3Q9UHC1 1453 aa32.09■■■□□ 2.73
TOP3A-204ENST00000472959 ZFYVE16Q7Z3T8 1539 aa32.07■■■□□ 2.72
TOP3A-204ENST00000472959 MYT1LQ9UL68 1186 aa32.07■■■□□ 2.72
TOP3A-204ENST00000472959 SPAG9O60271 1321 aaKnown RBP32.06■■■□□ 2.72
TOP3A-204ENST00000472959 YEATS2Q9ULM3 1422 aa32.05■■■□□ 2.72
TOP3A-204ENST00000472959 ARHGEF40Q8TER5 1519 aa32.04■■■□□ 2.72
TOP3A-204ENST00000472959 HECW2Q9P2P5 1572 aa32.02■■■□□ 2.72
TOP3A-204ENST00000472959 CCDC141Q6ZP82 1450 aa32.02■■■□□ 2.72
TOP3A-204ENST00000472959 TCOF1Q13428 1488 aaKnown RBP32■■■□□ 2.71
TOP3A-204ENST00000472959 ARHGEF5Q12774 1597 aa31.99■■■□□ 2.71
TOP3A-204ENST00000472959 PTPN23Q9H3S7 1636 aa31.99■■■□□ 2.71
TOP3A-204ENST00000472959 ATP10AO60312 1499 aa31.98■■■□□ 2.71
TOP3A-204ENST00000472959 TSPY4P0CV99 314 aa31.97■■■□□ 2.71
TOP3A-204ENST00000472959 TSPY10P0CW01 314 aa31.97■■■□□ 2.71
TOP3A-204ENST00000472959 RTEL1-TNFRSF6BF6WH68 1400 aa31.95■■■□□ 2.71
TOP3A-204ENST00000472959 C9orf84Q5VXU9 1444 aa31.92■■■□□ 2.7
TOP3A-204ENST00000472959 ATP7AQ04656 1500 aa31.92■■■□□ 2.7
TOP3A-204ENST00000472959 FAM50AQ14320 339 aaKnown RBP31.91■■■□□ 2.7
TOP3A-204ENST00000472959 KIDINS220Q9ULH0 1771 aa31.91■■■□□ 2.7
TOP3A-204ENST00000472959 ARID4BQ4LE39 1312 aaPredicted RBP31.9■■■□□ 2.7
TOP3A-204ENST00000472959 INO80Q9ULG1 1556 aaPredicted RBP31.9■■■□□ 2.7
TOP3A-204ENST00000472959 DIP2CQ9Y2E4 1556 aa31.9■■■□□ 2.7
TOP3A-204ENST00000472959 ABCA6Q8N139 1617 aa31.86■■■□□ 2.69
TOP3A-204ENST00000472959 ABCC5O15440 1437 aa31.86■■■□□ 2.69
TOP3A-204ENST00000472959 REREQ9P2R6 1566 aa31.84■■■□□ 2.69
TOP3A-204ENST00000472959 DAPK1P53355 1430 aa31.83■■■□□ 2.69
TOP3A-204ENST00000472959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.82■■■□□ 2.69
TOP3A-204ENST00000472959 SHANK2Q9UPX8 1470 aa31.81■■■□□ 2.68
TOP3A-204ENST00000472959 MAST1Q9Y2H9 1570 aa31.81■■■□□ 2.68
TOP3A-204ENST00000472959 KDM4FA0A1W2PPD8 638 aa31.8■■■□□ 2.68
TOP3A-204ENST00000472959 DNMT1P26358 1616 aaKnown RBP31.79■■■□□ 2.68
TOP3A-204ENST00000472959 RRBP1Q9P2E9 1410 aaKnown RBP31.78■■■□□ 2.68
TOP3A-204ENST00000472959 A2MP01023 1474 aa31.78■■■□□ 2.68
TOP3A-204ENST00000472959 AGLP35573 1532 aa31.76■■■□□ 2.68
TOP3A-204ENST00000472959 DHX29Q7Z478 1369 aaKnown RBP31.75■■■□□ 2.67
TOP3A-204ENST00000472959 SIGLEC1Q9BZZ2 1709 aa31.72■■■□□ 2.67
TOP3A-204ENST00000472959 ADGBQ8N7X0 1667 aa31.71■■■□□ 2.67
TOP3A-204ENST00000472959 CROCC2H7BZ55 1655 aa31.7■■■□□ 2.66
TOP3A-204ENST00000472959 PLXNC1O60486 1568 aa31.69■■■□□ 2.66
TOP3A-204ENST00000472959 MLECQ14165 292 aa31.69■■■□□ 2.66
TOP3A-204ENST00000472959 CHIC2Q9UKJ5 165 aa31.69■■■□□ 2.66
TOP3A-204ENST00000472959 ANKRD30AQ9BXX3 1397 aa31.68■■■□□ 2.66
TOP3A-204ENST00000472959 BCORL1Q5H9F3 1711 aa31.68■■■□□ 2.66
TOP3A-204ENST00000472959 RRP7BPQ9NSQ0 103 aa31.65■■■□□ 2.66
TOP3A-204ENST00000472959 KIF15Q9NS87 1388 aa31.65■■■□□ 2.66
TOP3A-204ENST00000472959 NCOA1Q15788 1441 aa31.64■■■□□ 2.66
TOP3A-204ENST00000472959 ADAMTSL3P82987 1691 aa31.64■■■□□ 2.65
TOP3A-204ENST00000472959 ADGRL2O95490 1459 aa31.63■■■□□ 2.65
TOP3A-204ENST00000472959 PTPRKQ15262 1439 aa31.62■■■□□ 2.65
TOP3A-204ENST00000472959 ITGAEP38570 1179 aa31.61■■■□□ 2.65
TOP3A-204ENST00000472959 DUOX2Q9NRD8 1548 aa31.6■■■□□ 2.65
TOP3A-204ENST00000472959 KIF3BO15066 747 aa31.59■■■□□ 2.65
TOP3A-204ENST00000472959 ROCK1Q13464 1354 aa31.58■■■□□ 2.65
TOP3A-204ENST00000472959 PPP6R1Q9UPN7 881 aa31.57■■■□□ 2.64
TOP3A-204ENST00000472959 GGT6Q6P531 493 aa31.55■■■□□ 2.64
TOP3A-204ENST00000472959 ESF1Q9H501 851 aaKnown RBP31.54■■■□□ 2.64
TOP3A-204ENST00000472959 ERBINQ96RT1 1412 aa31.54■■■□□ 2.64
TOP3A-204ENST00000472959 MADDQ8WXG6 1647 aa31.53■■■□□ 2.64
TOP3A-204ENST00000472959 PTPRMP28827 1452 aa31.49■■■□□ 2.63
TOP3A-204ENST00000472959 CNTLNQ9NXG0 1405 aa31.49■■■□□ 2.63
TOP3A-204ENST00000472959 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms