RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 CDC42BPBQ9Y5S2 1711 aa13.94□□□□□ -0.18
KDM5B-207ENST00000472822 MAPKBP1O60336 1514 aa13.94□□□□□ -0.18
KDM5B-207ENST00000472822 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
KDM5B-207ENST00000472822 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
KDM5B-207ENST00000472822 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
KDM5B-207ENST00000472822 PREX2Q70Z35 1606 aa13.91□□□□□ -0.18
KDM5B-207ENST00000472822 ABCA9Q8IUA7 1624 aa13.91□□□□□ -0.18
KDM5B-207ENST00000472822 PLCH2O75038 1416 aa13.9□□□□□ -0.18
KDM5B-207ENST00000472822 ITGAEP38570 1179 aa13.9□□□□□ -0.19
KDM5B-207ENST00000472822 MYO5CQ9NQX4 1742 aa13.9□□□□□ -0.19
KDM5B-207ENST00000472822 CAMSAP2Q08AD1 1489 aa13.88□□□□□ -0.19
KDM5B-207ENST00000472822 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
KDM5B-207ENST00000472822 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
KDM5B-207ENST00000472822 ABCC5O15440 1437 aa13.85□□□□□ -0.19
KDM5B-207ENST00000472822 ARHGAP5Q13017 1502 aa13.85□□□□□ -0.19
KDM5B-207ENST00000472822 MBD5Q9P267 1494 aa13.84□□□□□ -0.19
KDM5B-207ENST00000472822 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
KDM5B-207ENST00000472822 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.19
KDM5B-207ENST00000472822 GLI2P10070 1586 aa13.83□□□□□ -0.19
KDM5B-207ENST00000472822 DIP2BQ9P265 1576 aa13.83□□□□□ -0.19
KDM5B-207ENST00000472822 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
KDM5B-207ENST00000472822 HNRNPMP52272 730 aaKnown RBP eCLIP13.82□□□□□ -0.2
KDM5B-207ENST00000472822 DAPK1P53355 1430 aa13.82□□□□□ -0.2
KDM5B-207ENST00000472822 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
KDM5B-207ENST00000472822 EFCAB2Q5VUJ9 269 aa13.82□□□□□ -0.2
KDM5B-207ENST00000472822 MAP3K4Q9Y6R4 1608 aa13.81□□□□□ -0.2
KDM5B-207ENST00000472822 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
KDM5B-207ENST00000472822 FANCAO15360 1455 aa13.8□□□□□ -0.2
KDM5B-207ENST00000472822 KIAA1107Q9UPP5 1409 aa13.79□□□□□ -0.2
KDM5B-207ENST00000472822 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
KDM5B-207ENST00000472822 CHIC2Q9UKJ5 165 aa13.79□□□□□ -0.2
KDM5B-207ENST00000472822 KIF13AQ9H1H9 1805 aa13.79□□□□□ -0.2
KDM5B-207ENST00000472822 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
KDM5B-207ENST00000472822 ABCC1P33527 1531 aa13.79□□□□□ -0.2
KDM5B-207ENST00000472822 CROCC2H7BZ55 1655 aa13.78□□□□□ -0.2
KDM5B-207ENST00000472822 AKNAQ7Z591 1439 aa13.77□□□□□ -0.2
KDM5B-207ENST00000472822 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.21
KDM5B-207ENST00000472822 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
KDM5B-207ENST00000472822 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
KDM5B-207ENST00000472822 NAIPQ13075 1403 aa13.75□□□□□ -0.21
KDM5B-207ENST00000472822 RRP7BPQ9NSQ0 103 aa13.75□□□□□ -0.21
KDM5B-207ENST00000472822 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
KDM5B-207ENST00000472822 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
KDM5B-207ENST00000472822 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
KDM5B-207ENST00000472822 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
KDM5B-207ENST00000472822 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
KDM5B-207ENST00000472822 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
KDM5B-207ENST00000472822 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
KDM5B-207ENST00000472822 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
KDM5B-207ENST00000472822 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
KDM5B-207ENST00000472822 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
KDM5B-207ENST00000472822 SCAPERQ9BY12 1400 aa13.72□□□□□ -0.21
KDM5B-207ENST00000472822 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
KDM5B-207ENST00000472822 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
KDM5B-207ENST00000472822 KDM6BO15054 1643 aa13.72□□□□□ -0.21
KDM5B-207ENST00000472822 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
KDM5B-207ENST00000472822 NEO1Q92859 1461 aa13.71□□□□□ -0.21
KDM5B-207ENST00000472822 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.22
KDM5B-207ENST00000472822 ADGBQ8N7X0 1667 aa13.71□□□□□ -0.22
KDM5B-207ENST00000472822 GCC2Q8IWJ2 1684 aa13.7□□□□□ -0.22
KDM5B-207ENST00000472822 CFAP74Q9C0B2 1584 aa13.69□□□□□ -0.22
KDM5B-207ENST00000472822 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
KDM5B-207ENST00000472822 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
KDM5B-207ENST00000472822 HRCP23327 699 aa13.68□□□□□ -0.22
KDM5B-207ENST00000472822 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
KDM5B-207ENST00000472822 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
KDM5B-207ENST00000472822 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
KDM5B-207ENST00000472822 RAPGEF3O95398 923 aa13.65□□□□□ -0.22
KDM5B-207ENST00000472822 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
KDM5B-207ENST00000472822 KDM5CP41229 1560 aa13.64□□□□□ -0.23
KDM5B-207ENST00000472822 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
KDM5B-207ENST00000472822 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
KDM5B-207ENST00000472822 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
KDM5B-207ENST00000472822 KIF15Q9NS87 1388 aa13.64□□□□□ -0.23
KDM5B-207ENST00000472822 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
KDM5B-207ENST00000472822 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
KDM5B-207ENST00000472822 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
KDM5B-207ENST00000472822 RICTORQ6R327 1708 aa13.63□□□□□ -0.23
KDM5B-207ENST00000472822 DENND4BO75064 1496 aaPredicted RBP13.63□□□□□ -0.23
KDM5B-207ENST00000472822 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
KDM5B-207ENST00000472822 TEX14Q8IWB6 1497 aa13.63□□□□□ -0.23
KDM5B-207ENST00000472822 FRMPD1Q5SYB0 1578 aa13.63□□□□□ -0.23
KDM5B-207ENST00000472822 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
KDM5B-207ENST00000472822 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
KDM5B-207ENST00000472822 ATP7AQ04656 1500 aa13.62□□□□□ -0.23
KDM5B-207ENST00000472822 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
KDM5B-207ENST00000472822 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
KDM5B-207ENST00000472822 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
KDM5B-207ENST00000472822 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
KDM5B-207ENST00000472822 HECW2Q9P2P5 1572 aa13.57□□□□□ -0.24
KDM5B-207ENST00000472822 ABCA6Q8N139 1617 aa13.56□□□□□ -0.24
KDM5B-207ENST00000472822 ZMYM4Q5VZL5 1548 aa13.55□□□□□ -0.24
KDM5B-207ENST00000472822 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
KDM5B-207ENST00000472822 PZPP20742 1482 aa13.54□□□□□ -0.24
KDM5B-207ENST00000472822 DHX29Q7Z478 1369 aaKnown RBP13.54□□□□□ -0.24
KDM5B-207ENST00000472822 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
KDM5B-207ENST00000472822 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
KDM5B-207ENST00000472822 TRIM52Q96A61 297 aa13.53□□□□□ -0.24
KDM5B-207ENST00000472822 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
KDM5B-207ENST00000472822 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms