RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 EFCAB2Q5VUJ9 269 aa31.18■■■□□ 2.58
SF1-213ENST00000472725 CDC42BPBQ9Y5S2 1711 aa31.18■■■□□ 2.58
SF1-213ENST00000472725 GPATCH8Q9UKJ3 1502 aaKnown RBP31.17■■■□□ 2.58
SF1-213ENST00000472725 ITSN2Q9NZM3 1697 aa31.16■■■□□ 2.58
SF1-213ENST00000472725 ARHGAP5Q13017 1502 aa31.15■■■□□ 2.58
SF1-213ENST00000472725 KDM6BO15054 1643 aa31.15■■■□□ 2.58
SF1-213ENST00000472725 AKNAQ7Z591 1439 aa31.13■■■□□ 2.57
SF1-213ENST00000472725 CFDP1Q9UEE9 299 aaPredicted RBP31.07■■■□□ 2.56
SF1-213ENST00000472725 ADGRL1O94910 1474 aa31.03■■■□□ 2.56
SF1-213ENST00000472725 COL17A1Q9UMD9 1497 aaPredicted RBP31.03■■■□□ 2.56
SF1-213ENST00000472725 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.55
SF1-213ENST00000472725 PLEKHH2Q8IVE3 1493 aa31.01■■■□□ 2.55
SF1-213ENST00000472725 MYOM3Q5VTT5 1437 aa31■■■□□ 2.55
SF1-213ENST00000472725 MIA2Q96PC5 1412 aa30.99■■■□□ 2.55
SF1-213ENST00000472725 SCAPERQ9BY12 1400 aa30.98■■■□□ 2.55
SF1-213ENST00000472725 ABCC1P33527 1531 aa30.98■■■□□ 2.55
SF1-213ENST00000472725 SAMD9LQ8IVG5 1584 aa30.97■■■□□ 2.55
SF1-213ENST00000472725 KIAA1107Q9UPP5 1409 aa30.97■■■□□ 2.55
SF1-213ENST00000472725 RICTORQ6R327 1708 aa30.94■■■□□ 2.54
SF1-213ENST00000472725 POGZQ7Z3K3 1410 aa30.92■■■□□ 2.54
SF1-213ENST00000472725 ZNF777Q9ULD5 760 aaPredicted RBP30.92■■■□□ 2.54
SF1-213ENST00000472725 ZNF518AQ6AHZ1 1483 aa30.9■■■□□ 2.54
SF1-213ENST00000472725 FRMPD1Q5SYB0 1578 aa30.9■■■□□ 2.54
SF1-213ENST00000472725 RAPGEF3O95398 923 aa30.88■■■□□ 2.53
SF1-213ENST00000472725 ZMYM4Q5VZL5 1548 aa30.87■■■□□ 2.53
SF1-213ENST00000472725 CAMSAP2Q08AD1 1489 aa30.86■■■□□ 2.53
SF1-213ENST00000472725 ARHGEF12Q9NZN5 1544 aa30.86■■■□□ 2.53
SF1-213ENST00000472725 SYCP2Q9BX26 1530 aa30.85■■■□□ 2.53
SF1-213ENST00000472725 FGD6Q6ZV73 1430 aa30.85■■■□□ 2.53
SF1-213ENST00000472725 RSPH4AQ5TD94 716 aa30.85■■■□□ 2.53
SF1-213ENST00000472725 KDM5CP41229 1560 aa30.84■■■□□ 2.53
SF1-213ENST00000472725 MAGI2Q86UL8 1455 aa30.84■■■□□ 2.53
SF1-213ENST00000472725 ZNF644Q9H582 1327 aaPredicted RBP30.82■■■□□ 2.52
SF1-213ENST00000472725 MBD5Q9P267 1494 aa30.81■■■□□ 2.52
SF1-213ENST00000472725 TRAPPC8Q9Y2L5 1435 aa30.81■■■□□ 2.52
SF1-213ENST00000472725 PTPN23Q9H3S7 1636 aa30.8■■■□□ 2.52
SF1-213ENST00000472725 TCOF1Q13428 1488 aaKnown RBP30.79■■■□□ 2.52
SF1-213ENST00000472725 HNRNPMP52272 730 aaKnown RBP eCLIP30.79■■■□□ 2.52
SF1-213ENST00000472725 ARHGEF5Q12774 1597 aa30.79■■■□□ 2.52
SF1-213ENST00000472725 AFAP1Q8N556 730 aa30.77■■■□□ 2.52
SF1-213ENST00000472725 MLH3Q9UHC1 1453 aa30.76■■■□□ 2.52
SF1-213ENST00000472725 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
SF1-213ENST00000472725 CCDC141Q6ZP82 1450 aa30.74■■■□□ 2.51
SF1-213ENST00000472725 HECW2Q9P2P5 1572 aa30.74■■■□□ 2.51
SF1-213ENST00000472725 ZFYVE16Q7Z3T8 1539 aa30.71■■■□□ 2.51
SF1-213ENST00000472725 ARHGEF40Q8TER5 1519 aa30.7■■■□□ 2.51
SF1-213ENST00000472725 SPAG9O60271 1321 aaKnown RBP30.68■■■□□ 2.5
SF1-213ENST00000472725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.67■■■□□ 2.5
SF1-213ENST00000472725 RTEL1-TNFRSF6BF6WH68 1400 aa30.67■■■□□ 2.5
SF1-213ENST00000472725 KIDINS220Q9ULH0 1771 aa30.65■■■□□ 2.5
SF1-213ENST00000472725 INO80Q9ULG1 1556 aaPredicted RBP30.65■■■□□ 2.5
SF1-213ENST00000472725 TSPY4P0CV99 314 aa30.64■■■□□ 2.5
SF1-213ENST00000472725 TSPY10P0CW01 314 aa30.64■■■□□ 2.5
SF1-213ENST00000472725 ATP7AQ04656 1500 aa30.63■■■□□ 2.49
SF1-213ENST00000472725 DNMT1P26358 1616 aaKnown RBP30.63■■■□□ 2.49
SF1-213ENST00000472725 RRBP1Q9P2E9 1410 aaKnown RBP30.63■■■□□ 2.49
SF1-213ENST00000472725 YEATS2Q9ULM3 1422 aa30.62■■■□□ 2.49
SF1-213ENST00000472725 MAST1Q9Y2H9 1570 aa30.62■■■□□ 2.49
SF1-213ENST00000472725 MYT1LQ9UL68 1186 aa30.61■■■□□ 2.49
SF1-213ENST00000472725 ATP10AO60312 1499 aa30.61■■■□□ 2.49
SF1-213ENST00000472725 SHANK2Q9UPX8 1470 aa30.6■■■□□ 2.49
SF1-213ENST00000472725 FAM50AQ14320 339 aaKnown RBP30.59■■■□□ 2.49
SF1-213ENST00000472725 REREQ9P2R6 1566 aa30.58■■■□□ 2.49
SF1-213ENST00000472725 DIP2CQ9Y2E4 1556 aa30.58■■■□□ 2.49
SF1-213ENST00000472725 DAPK1P53355 1430 aa30.58■■■□□ 2.49
SF1-213ENST00000472725 CROCC2H7BZ55 1655 aa30.58■■■□□ 2.49
SF1-213ENST00000472725 ABCC5O15440 1437 aa30.57■■■□□ 2.48
SF1-213ENST00000472725 C9orf84Q5VXU9 1444 aa30.56■■■□□ 2.48
SF1-213ENST00000472725 ABCA6Q8N139 1617 aa30.56■■■□□ 2.48
SF1-213ENST00000472725 ADGBQ8N7X0 1667 aa30.52■■■□□ 2.48
SF1-213ENST00000472725 PLXNC1O60486 1568 aa30.49■■■□□ 2.47
SF1-213ENST00000472725 AGLP35573 1532 aa30.46■■■□□ 2.47
SF1-213ENST00000472725 A2MP01023 1474 aa30.45■■■□□ 2.47
SF1-213ENST00000472725 ADGRL2O95490 1459 aa30.43■■■□□ 2.46
SF1-213ENST00000472725 DHX29Q7Z478 1369 aaKnown RBP30.41■■■□□ 2.46
SF1-213ENST00000472725 ANKRD30AQ9BXX3 1397 aa30.41■■■□□ 2.46
SF1-213ENST00000472725 ARID4BQ4LE39 1312 aaPredicted RBP30.39■■■□□ 2.46
SF1-213ENST00000472725 SIGLEC1Q9BZZ2 1709 aa30.39■■■□□ 2.45
SF1-213ENST00000472725 ROCK1Q13464 1354 aa30.38■■■□□ 2.45
SF1-213ENST00000472725 NCOA1Q15788 1441 aa30.38■■■□□ 2.45
SF1-213ENST00000472725 DUOX2Q9NRD8 1548 aa30.37■■■□□ 2.45
SF1-213ENST00000472725 BCORL1Q5H9F3 1711 aa30.36■■■□□ 2.45
SF1-213ENST00000472725 PTPRKQ15262 1439 aa30.35■■■□□ 2.45
SF1-213ENST00000472725 KIF15Q9NS87 1388 aa30.34■■■□□ 2.45
SF1-213ENST00000472725 CHIC2Q9UKJ5 165 aa30.33■■■□□ 2.45
SF1-213ENST00000472725 EIF2AK4Q9P2K8 1649 aaKnown RBP30.31■■■□□ 2.44
SF1-213ENST00000472725 ERBINQ96RT1 1412 aa30.3■■■□□ 2.44
SF1-213ENST00000472725 RRP7BPQ9NSQ0 103 aa30.29■■■□□ 2.44
SF1-213ENST00000472725 ADAMTSL3P82987 1691 aa30.29■■■□□ 2.44
SF1-213ENST00000472725 ITGAEP38570 1179 aa30.27■■■□□ 2.44
SF1-213ENST00000472725 PPP6R1Q9UPN7 881 aa30.25■■■□□ 2.43
SF1-213ENST00000472725 KDM4FA0A1W2PPD8 638 aa30.22■■■□□ 2.43
SF1-213ENST00000472725 KIF3BO15066 747 aa30.21■■■□□ 2.43
SF1-213ENST00000472725 FAM135AQ9P2D6 1515 aa30.2■■■□□ 2.42
SF1-213ENST00000472725 RNF17Q9BXT8 1623 aaKnown RBP30.19■■■□□ 2.42
SF1-213ENST00000472725 ANKRD50Q9ULJ7 1429 aa30.19■■■□□ 2.42
SF1-213ENST00000472725 MLECQ14165 292 aa30.18■■■□□ 2.42
SF1-213ENST00000472725 FER1L4A9Z1Z3 1794 aa30.18■■■□□ 2.42
SF1-213ENST00000472725 MADDQ8WXG6 1647 aa30.16■■■□□ 2.42
SF1-213ENST00000472725 CNTLNQ9NXG0 1405 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms