RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 POGZQ7Z3K3 1410 aa31.75■■■□□ 2.67
UBQLN4-203ENST00000472638 ARID4BQ4LE39 1312 aaPredicted RBP31.75■■■□□ 2.67
UBQLN4-203ENST00000472638 ARHGEF40Q8TER5 1519 aa31.73■■■□□ 2.67
UBQLN4-203ENST00000472638 ZMYM4Q5VZL5 1548 aa31.72■■■□□ 2.67
UBQLN4-203ENST00000472638 YEATS2Q9ULM3 1422 aa31.71■■■□□ 2.67
UBQLN4-203ENST00000472638 CDC42BPBQ9Y5S2 1711 aa31.7■■■□□ 2.67
UBQLN4-203ENST00000472638 ZFYVE16Q7Z3T8 1539 aa31.7■■■□□ 2.66
UBQLN4-203ENST00000472638 MTUS2Q5JR59 1369 aa31.69■■■□□ 2.66
UBQLN4-203ENST00000472638 PREX2Q70Z35 1606 aa31.69■■■□□ 2.66
UBQLN4-203ENST00000472638 AFAP1Q8N556 730 aa31.66■■■□□ 2.66
UBQLN4-203ENST00000472638 MAGI2Q86UL8 1455 aa31.65■■■□□ 2.66
UBQLN4-203ENST00000472638 ZNF777Q9ULD5 760 aaPredicted RBP31.63■■■□□ 2.65
UBQLN4-203ENST00000472638 CDC42BPAQ5VT25 1732 aa31.63■■■□□ 2.65
UBQLN4-203ENST00000472638 ZNF518AQ6AHZ1 1483 aa31.62■■■□□ 2.65
UBQLN4-203ENST00000472638 GPATCH8Q9UKJ3 1502 aaKnown RBP31.6■■■□□ 2.65
UBQLN4-203ENST00000472638 MYT1LQ9UL68 1186 aa31.6■■■□□ 2.65
UBQLN4-203ENST00000472638 ARHGEF12Q9NZN5 1544 aa31.59■■■□□ 2.65
UBQLN4-203ENST00000472638 CCNB3Q8WWL7 1395 aa31.58■■■□□ 2.65
UBQLN4-203ENST00000472638 ABCC1P33527 1531 aa31.58■■■□□ 2.65
UBQLN4-203ENST00000472638 ADAMTSL3P82987 1691 aa31.57■■■□□ 2.65
UBQLN4-203ENST00000472638 BCORL1Q5H9F3 1711 aa31.57■■■□□ 2.64
UBQLN4-203ENST00000472638 VPS8Q8N3P4 1428 aa31.57■■■□□ 2.64
UBQLN4-203ENST00000472638 TRAPPC8Q9Y2L5 1435 aa31.57■■■□□ 2.64
UBQLN4-203ENST00000472638 EHBP1L1Q8N3D4 1523 aa31.55■■■□□ 2.64
UBQLN4-203ENST00000472638 CFDP1Q9UEE9 299 aaPredicted RBP31.54■■■□□ 2.64
UBQLN4-203ENST00000472638 KDM5CP41229 1560 aa31.54■■■□□ 2.64
UBQLN4-203ENST00000472638 SIGLEC1Q9BZZ2 1709 aa31.53■■■□□ 2.64
UBQLN4-203ENST00000472638 ATP10AO60312 1499 aa31.52■■■□□ 2.64
UBQLN4-203ENST00000472638 MLECQ14165 292 aa31.52■■■□□ 2.64
UBQLN4-203ENST00000472638 SAMD9LQ8IVG5 1584 aa31.51■■■□□ 2.63
UBQLN4-203ENST00000472638 ITSN2Q9NZM3 1697 aa31.51■■■□□ 2.63
UBQLN4-203ENST00000472638 MADDQ8WXG6 1647 aa31.49■■■□□ 2.63
UBQLN4-203ENST00000472638 PTPRMP28827 1452 aa31.49■■■□□ 2.63
UBQLN4-203ENST00000472638 HNRNPMP52272 730 aaKnown RBP eCLIP31.49■■■□□ 2.63
UBQLN4-203ENST00000472638 C9orf84Q5VXU9 1444 aa31.49■■■□□ 2.63
UBQLN4-203ENST00000472638 HECW2Q9P2P5 1572 aa31.47■■■□□ 2.63
UBQLN4-203ENST00000472638 TIAM1Q13009 1591 aa31.47■■■□□ 2.63
UBQLN4-203ENST00000472638 SYCP2Q9BX26 1530 aa31.46■■■□□ 2.63
UBQLN4-203ENST00000472638 MLH3Q9UHC1 1453 aa31.44■■■□□ 2.62
UBQLN4-203ENST00000472638 DIP2CQ9Y2E4 1556 aa31.42■■■□□ 2.62
UBQLN4-203ENST00000472638 ZNF644Q9H582 1327 aaPredicted RBP31.41■■■□□ 2.62
UBQLN4-203ENST00000472638 PLPPR3Q6T4P5 718 aa31.4■■■□□ 2.62
UBQLN4-203ENST00000472638 RIMS1Q86UR5 1692 aaKnown RBP31.4■■■□□ 2.62
UBQLN4-203ENST00000472638 NCOA2Q15596 1464 aa31.4■■■□□ 2.62
UBQLN4-203ENST00000472638 ABCA6Q8N139 1617 aa31.39■■■□□ 2.62
UBQLN4-203ENST00000472638 PLEKHH2Q8IVE3 1493 aa31.38■■■□□ 2.61
UBQLN4-203ENST00000472638 KIAA1107Q9UPP5 1409 aa31.37■■■□□ 2.61
UBQLN4-203ENST00000472638 SUPT6HQ7KZ85 1726 aaKnown RBP31.37■■■□□ 2.61
UBQLN4-203ENST00000472638 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
UBQLN4-203ENST00000472638 LRRC9Q6ZRR7 1453 aa31.35■■■□□ 2.61
UBQLN4-203ENST00000472638 KANK4Q5T7N3 995 aaPredicted RBP31.34■■■□□ 2.61
UBQLN4-203ENST00000472638 KIDINS220Q9ULH0 1771 aa31.34■■■□□ 2.61
UBQLN4-203ENST00000472638 REREQ9P2R6 1566 aa31.29■■■□□ 2.6
UBQLN4-203ENST00000472638 MAP3K1Q13233 1512 aa31.28■■■□□ 2.6
UBQLN4-203ENST00000472638 FER1L4A9Z1Z3 1794 aa31.28■■■□□ 2.6
UBQLN4-203ENST00000472638 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
UBQLN4-203ENST00000472638 APLP2Q06481 763 aa31.24■■■□□ 2.59
UBQLN4-203ENST00000472638 MBD5Q9P267 1494 aa31.24■■■□□ 2.59
UBQLN4-203ENST00000472638 AGLP35573 1532 aa31.22■■■□□ 2.59
UBQLN4-203ENST00000472638 CAMSAP2Q08AD1 1489 aa31.21■■■□□ 2.59
UBQLN4-203ENST00000472638 INO80Q9ULG1 1556 aaPredicted RBP31.21■■■□□ 2.59
UBQLN4-203ENST00000472638 CEBPAP49715 358 aaPredicted RBP31.19■■■□□ 2.58
UBQLN4-203ENST00000472638 A2MP01023 1474 aa31.14■■■□□ 2.58
UBQLN4-203ENST00000472638 ESF1Q9H501 851 aaKnown RBP31.14■■■□□ 2.58
UBQLN4-203ENST00000472638 CCDC141Q6ZP82 1450 aa31.13■■■□□ 2.57
UBQLN4-203ENST00000472638 LMTK3Q96Q04 1460 aa31.12■■■□□ 2.57
UBQLN4-203ENST00000472638 MYOM3Q5VTT5 1437 aa31.09■■■□□ 2.57
UBQLN4-203ENST00000472638 RTEL1-TNFRSF6BF6WH68 1400 aa31.08■■■□□ 2.57
UBQLN4-203ENST00000472638 RSPH4AQ5TD94 716 aa31.08■■■□□ 2.57
UBQLN4-203ENST00000472638 PLXNC1O60486 1568 aa31.06■■■□□ 2.56
UBQLN4-203ENST00000472638 HSPA2P54652 639 aa31.06■■■□□ 2.56
UBQLN4-203ENST00000472638 GGT6Q6P531 493 aa31.04■■■□□ 2.56
UBQLN4-203ENST00000472638 ADGBQ8N7X0 1667 aa31.03■■■□□ 2.56
UBQLN4-203ENST00000472638 TSPY4P0CV99 314 aa31.03■■■□□ 2.56
UBQLN4-203ENST00000472638 TSPY10P0CW01 314 aa31.03■■■□□ 2.56
UBQLN4-203ENST00000472638 MIA2Q96PC5 1412 aa31.03■■■□□ 2.56
UBQLN4-203ENST00000472638 ARHGEF5Q12774 1597 aa31.03■■■□□ 2.56
UBQLN4-203ENST00000472638 CNTLNQ9NXG0 1405 aa30.99■■■□□ 2.55
UBQLN4-203ENST00000472638 DHX29Q7Z478 1369 aaKnown RBP30.99■■■□□ 2.55
UBQLN4-203ENST00000472638 C3P01024 1663 aa30.97■■■□□ 2.55
UBQLN4-203ENST00000472638 KIF3BO15066 747 aa30.93■■■□□ 2.54
UBQLN4-203ENST00000472638 ZMYM3Q14202 1370 aa30.92■■■□□ 2.54
UBQLN4-203ENST00000472638 PREX1Q8TCU6 1659 aa30.91■■■□□ 2.54
UBQLN4-203ENST00000472638 PTPN23Q9H3S7 1636 aa30.89■■■□□ 2.54
UBQLN4-203ENST00000472638 CLTCQ00610 1675 aaKnown RBP30.89■■■□□ 2.54
UBQLN4-203ENST00000472638 UHRF1BP1Q6BDS2 1440 aa30.89■■■□□ 2.53
UBQLN4-203ENST00000472638 FGD6Q6ZV73 1430 aa30.88■■■□□ 2.53
UBQLN4-203ENST00000472638 MAST1Q9Y2H9 1570 aa30.87■■■□□ 2.53
UBQLN4-203ENST00000472638 MROH2AA6NES4 1674 aa30.86■■■□□ 2.53
UBQLN4-203ENST00000472638 PPP6R1Q9UPN7 881 aa30.84■■■□□ 2.53
UBQLN4-203ENST00000472638 ABCC5O15440 1437 aa30.82■■■□□ 2.52
UBQLN4-203ENST00000472638 TCOF1Q13428 1488 aaKnown RBP30.8■■■□□ 2.52
UBQLN4-203ENST00000472638 NPATQ14207 1427 aa30.79■■■□□ 2.52
UBQLN4-203ENST00000472638 SETD1BQ9UPS6 1966 aaKnown RBP30.78■■■□□ 2.52
UBQLN4-203ENST00000472638 DAPK1P53355 1430 aa30.77■■■□□ 2.52
UBQLN4-203ENST00000472638 WASHC2CQ9Y4E1 1318 aa30.75■■■□□ 2.51
UBQLN4-203ENST00000472638 PTPRKQ15262 1439 aa30.75■■■□□ 2.51
UBQLN4-203ENST00000472638 RRP7BPQ9NSQ0 103 aa30.75■■■□□ 2.51
UBQLN4-203ENST00000472638 FAM50AQ14320 339 aaKnown RBP30.74■■■□□ 2.51
UBQLN4-203ENST00000472638 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms