RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 MYOM3Q5VTT5 1437 aa16.02■□□□□ 0.15
UBE2F-220ENST00000472479 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.15
UBE2F-220ENST00000472479 GLI2P10070 1586 aa16.01■□□□□ 0.15
UBE2F-220ENST00000472479 TTC37Q6PGP7 1564 aa16.01■□□□□ 0.15
UBE2F-220ENST00000472479 ITGAEP38570 1179 aa16.01■□□□□ 0.15
UBE2F-220ENST00000472479 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
UBE2F-220ENST00000472479 ABCA9Q8IUA7 1624 aa16■□□□□ 0.15
UBE2F-220ENST00000472479 ZNF644Q9H582 1327 aaPredicted RBP15.98■□□□□ 0.15
UBE2F-220ENST00000472479 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
UBE2F-220ENST00000472479 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
UBE2F-220ENST00000472479 MIA2Q96PC5 1412 aa15.97■□□□□ 0.15
UBE2F-220ENST00000472479 FANCAO15360 1455 aa15.97■□□□□ 0.15
UBE2F-220ENST00000472479 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
UBE2F-220ENST00000472479 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.15
UBE2F-220ENST00000472479 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.15
UBE2F-220ENST00000472479 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
UBE2F-220ENST00000472479 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
UBE2F-220ENST00000472479 AKNAQ7Z591 1439 aa15.93■□□□□ 0.14
UBE2F-220ENST00000472479 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
UBE2F-220ENST00000472479 TSPY4P0CV99 314 aa15.93■□□□□ 0.14
UBE2F-220ENST00000472479 TSPY10P0CW01 314 aa15.93■□□□□ 0.14
UBE2F-220ENST00000472479 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
UBE2F-220ENST00000472479 CDC42BPAQ5VT25 1732 aa15.93■□□□□ 0.14
UBE2F-220ENST00000472479 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
UBE2F-220ENST00000472479 PLEKHH2Q8IVE3 1493 aa15.91■□□□□ 0.14
UBE2F-220ENST00000472479 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
UBE2F-220ENST00000472479 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
UBE2F-220ENST00000472479 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
UBE2F-220ENST00000472479 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
UBE2F-220ENST00000472479 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
UBE2F-220ENST00000472479 ARAP3Q8WWN8 1544 aa15.9■□□□□ 0.14
UBE2F-220ENST00000472479 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
UBE2F-220ENST00000472479 NEO1Q92859 1461 aa15.89■□□□□ 0.13
UBE2F-220ENST00000472479 CFAP74Q9C0B2 1584 aa15.89■□□□□ 0.13
UBE2F-220ENST00000472479 CHIC2Q9UKJ5 165 aa15.88■□□□□ 0.13
UBE2F-220ENST00000472479 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
UBE2F-220ENST00000472479 RAPGEF3O95398 923 aa15.87■□□□□ 0.13
UBE2F-220ENST00000472479 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
UBE2F-220ENST00000472479 SAMD9LQ8IVG5 1584 aa15.85■□□□□ 0.13
UBE2F-220ENST00000472479 DENND4BO75064 1496 aaPredicted RBP15.85■□□□□ 0.13
UBE2F-220ENST00000472479 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
UBE2F-220ENST00000472479 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
UBE2F-220ENST00000472479 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
UBE2F-220ENST00000472479 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
UBE2F-220ENST00000472479 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.13
UBE2F-220ENST00000472479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.12
UBE2F-220ENST00000472479 ABCC1P33527 1531 aa15.81■□□□□ 0.12
UBE2F-220ENST00000472479 TRAPPC8Q9Y2L5 1435 aa15.81■□□□□ 0.12
UBE2F-220ENST00000472479 CCDC141Q6ZP82 1450 aa15.8■□□□□ 0.12
UBE2F-220ENST00000472479 DAPK1P53355 1430 aa15.8■□□□□ 0.12
UBE2F-220ENST00000472479 PPRC1Q5VV67 1664 aaKnown RBP15.8■□□□□ 0.12
UBE2F-220ENST00000472479 ABCC5O15440 1437 aa15.79■□□□□ 0.12
UBE2F-220ENST00000472479 ARHGEF12Q9NZN5 1544 aa15.79■□□□□ 0.12
UBE2F-220ENST00000472479 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
UBE2F-220ENST00000472479 RRP7BPQ9NSQ0 103 aa15.78■□□□□ 0.12
UBE2F-220ENST00000472479 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
UBE2F-220ENST00000472479 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.12
UBE2F-220ENST00000472479 ANKRD30AQ9BXX3 1397 aa15.76■□□□□ 0.11
UBE2F-220ENST00000472479 KDM6BO15054 1643 aa15.76■□□□□ 0.11
UBE2F-220ENST00000472479 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
UBE2F-220ENST00000472479 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
UBE2F-220ENST00000472479 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
UBE2F-220ENST00000472479 COL17A1Q9UMD9 1497 aaPredicted RBP15.73■□□□□ 0.11
UBE2F-220ENST00000472479 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
UBE2F-220ENST00000472479 RTEL1-TNFRSF6BF6WH68 1400 aa15.69■□□□□ 0.1
UBE2F-220ENST00000472479 ARID4BQ4LE39 1312 aaPredicted RBP15.69■□□□□ 0.1
UBE2F-220ENST00000472479 KIF15Q9NS87 1388 aa15.69■□□□□ 0.1
UBE2F-220ENST00000472479 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
UBE2F-220ENST00000472479 MLH3Q9UHC1 1453 aa15.68■□□□□ 0.1
UBE2F-220ENST00000472479 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
UBE2F-220ENST00000472479 ROCK1Q13464 1354 aa15.67■□□□□ 0.1
UBE2F-220ENST00000472479 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
UBE2F-220ENST00000472479 RICTORQ6R327 1708 aa15.67■□□□□ 0.1
UBE2F-220ENST00000472479 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
UBE2F-220ENST00000472479 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
UBE2F-220ENST00000472479 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
UBE2F-220ENST00000472479 HECW2Q9P2P5 1572 aa15.66■□□□□ 0.1
UBE2F-220ENST00000472479 KDM5CP41229 1560 aa15.65■□□□□ 0.1
UBE2F-220ENST00000472479 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
UBE2F-220ENST00000472479 YEATS2Q9ULM3 1422 aa15.65■□□□□ 0.1
UBE2F-220ENST00000472479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.1
UBE2F-220ENST00000472479 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
UBE2F-220ENST00000472479 MAST1Q9Y2H9 1570 aa15.64■□□□□ 0.09
UBE2F-220ENST00000472479 KIF3BO15066 747 aa15.64■□□□□ 0.09
UBE2F-220ENST00000472479 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
UBE2F-220ENST00000472479 SETD5Q9C0A6 1442 aa15.63■□□□□ 0.09
UBE2F-220ENST00000472479 ATP10AO60312 1499 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
UBE2F-220ENST00000472479 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 MLECQ14165 292 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 GGT6Q6P531 493 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 ZMYM4Q5VZL5 1548 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 A2MP01023 1474 aa15.62■□□□□ 0.09
UBE2F-220ENST00000472479 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
UBE2F-220ENST00000472479 INO80Q9ULG1 1556 aaPredicted RBP15.6■□□□□ 0.09
UBE2F-220ENST00000472479 KIDINS220Q9ULH0 1771 aa15.6■□□□□ 0.09
UBE2F-220ENST00000472479 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
UBE2F-220ENST00000472479 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
UBE2F-220ENST00000472479 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms