RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
TARDBP-204ENST00000472476 KIF14Q15058 1648 aa23.93■■□□□ 1.42
TARDBP-204ENST00000472476 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
TARDBP-204ENST00000472476 MYO5CQ9NQX4 1742 aa23.93■■□□□ 1.42
TARDBP-204ENST00000472476 MLECQ14165 292 aa23.92■■□□□ 1.42
TARDBP-204ENST00000472476 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
TARDBP-204ENST00000472476 LRRIQ1Q96JM4 1722 aa23.92■■□□□ 1.42
TARDBP-204ENST00000472476 ATP10AO60312 1499 aa23.92■■□□□ 1.42
TARDBP-204ENST00000472476 FMN1Q68DA7 1419 aa23.92■■□□□ 1.42
TARDBP-204ENST00000472476 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
TARDBP-204ENST00000472476 ARHGEF12Q9NZN5 1544 aa23.89■■□□□ 1.42
TARDBP-204ENST00000472476 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
TARDBP-204ENST00000472476 ATP1B4Q9UN42 357 aaPredicted RBP23.89■■□□□ 1.41
TARDBP-204ENST00000472476 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
TARDBP-204ENST00000472476 TROQ12816 1431 aaPredicted RBP23.84■■□□□ 1.41
TARDBP-204ENST00000472476 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
TARDBP-204ENST00000472476 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
TARDBP-204ENST00000472476 KDM5CP41229 1560 aa23.82■■□□□ 1.4
TARDBP-204ENST00000472476 CEBPAP49715 358 aaPredicted RBP23.82■■□□□ 1.4
TARDBP-204ENST00000472476 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
TARDBP-204ENST00000472476 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
TARDBP-204ENST00000472476 ZNF518AQ6AHZ1 1483 aa23.8■■□□□ 1.4
TARDBP-204ENST00000472476 ARHGAP5Q13017 1502 aa23.78■■□□□ 1.4
TARDBP-204ENST00000472476 PREX1Q8TCU6 1659 aa23.77■■□□□ 1.4
TARDBP-204ENST00000472476 DIP2CQ9Y2E4 1556 aa23.77■■□□□ 1.4
TARDBP-204ENST00000472476 CERKQ8TCT0 537 aa23.76■■□□□ 1.39
TARDBP-204ENST00000472476 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
TARDBP-204ENST00000472476 SETD1BQ9UPS6 1966 aaKnown RBP23.73■■□□□ 1.39
TARDBP-204ENST00000472476 REREQ9P2R6 1566 aa23.73■■□□□ 1.39
TARDBP-204ENST00000472476 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
TARDBP-204ENST00000472476 CLIP1P30622 1438 aa23.72■■□□□ 1.39
TARDBP-204ENST00000472476 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
TARDBP-204ENST00000472476 MLH3Q9UHC1 1453 aa23.72■■□□□ 1.39
TARDBP-204ENST00000472476 PREX2Q70Z35 1606 aa23.7■■□□□ 1.39
TARDBP-204ENST00000472476 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
TARDBP-204ENST00000472476 ABCC1P33527 1531 aa23.69■■□□□ 1.38
TARDBP-204ENST00000472476 C3P01024 1663 aa23.67■■□□□ 1.38
TARDBP-204ENST00000472476 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
TARDBP-204ENST00000472476 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
TARDBP-204ENST00000472476 AGLP35573 1532 aa23.66■■□□□ 1.38
TARDBP-204ENST00000472476 CDC42BPAQ5VT25 1732 aa23.66■■□□□ 1.38
TARDBP-204ENST00000472476 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
TARDBP-204ENST00000472476 MYT1LQ9UL68 1186 aa23.62■■□□□ 1.37
TARDBP-204ENST00000472476 UHRF1BP1Q6BDS2 1440 aa23.61■■□□□ 1.37
TARDBP-204ENST00000472476 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
TARDBP-204ENST00000472476 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
TARDBP-204ENST00000472476 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
TARDBP-204ENST00000472476 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
TARDBP-204ENST00000472476 PTPRTO14522 1441 aa23.52■■□□□ 1.36
TARDBP-204ENST00000472476 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.357e-7■■□□□ 12.4
TARDBP-204ENST00000472476 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
TARDBP-204ENST00000472476 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
TARDBP-204ENST00000472476 LTBP4Q8N2S1 1624 aa23.48■■□□□ 1.35
TARDBP-204ENST00000472476 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
TARDBP-204ENST00000472476 MROH2AA6NES4 1674 aa23.46■■□□□ 1.35
TARDBP-204ENST00000472476 NCOA1Q15788 1441 aa23.46■■□□□ 1.35
TARDBP-204ENST00000472476 SUPT6HQ7KZ85 1726 aaKnown RBP23.46■■□□□ 1.35
TARDBP-204ENST00000472476 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
TARDBP-204ENST00000472476 ZMYM3Q14202 1370 aa23.44■■□□□ 1.34
TARDBP-204ENST00000472476 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
TARDBP-204ENST00000472476 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
TARDBP-204ENST00000472476 NPATQ14207 1427 aa23.42■■□□□ 1.34
TARDBP-204ENST00000472476 PLXNC1O60486 1568 aa23.42■■□□□ 1.34
TARDBP-204ENST00000472476 INO80Q9ULG1 1556 aaPredicted RBP23.42■■□□□ 1.34
TARDBP-204ENST00000472476 ATP7AQ04656 1500 aa23.42■■□□□ 1.34
TARDBP-204ENST00000472476 CAMSAP1Q5T5Y3 1602 aa23.4■■□□□ 1.34
TARDBP-204ENST00000472476 CLTCQ00610 1675 aaKnown RBP23.39■■□□□ 1.34
TARDBP-204ENST00000472476 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.33
TARDBP-204ENST00000472476 ILDR2Q71H61 639 aa23.38■■□□□ 1.33
TARDBP-204ENST00000472476 A2MP01023 1474 aa23.37■■□□□ 1.33
TARDBP-204ENST00000472476 ZNF644Q9H582 1327 aaPredicted RBP23.36■■□□□ 1.33
TARDBP-204ENST00000472476 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
TARDBP-204ENST00000472476 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
TARDBP-204ENST00000472476 NCKAP5LQ9HCH0 1330 aa23.34■■□□□ 1.33
TARDBP-204ENST00000472476 PTPRKQ15262 1439 aa23.34■■□□□ 1.33
TARDBP-204ENST00000472476 MBD5Q9P267 1494 aa23.33■■□□□ 1.33
TARDBP-204ENST00000472476 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
TARDBP-204ENST00000472476 IQSEC2Q5JU85 1478 aa23.32■■□□□ 1.32
TARDBP-204ENST00000472476 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
TARDBP-204ENST00000472476 DISP3Q9P2K9 1392 aa23.31■■□□□ 1.32
TARDBP-204ENST00000472476 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
TARDBP-204ENST00000472476 ADGBQ8N7X0 1667 aa23.3■■□□□ 1.32
TARDBP-204ENST00000472476 GGT6Q6P531 493 aa23.3■■□□□ 1.32
TARDBP-204ENST00000472476 MTUS2Q5JR59 1369 aa23.29■■□□□ 1.32
TARDBP-204ENST00000472476 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
TARDBP-204ENST00000472476 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
TARDBP-204ENST00000472476 TCOF1Q13428 1488 aaKnown RBP23.27■■□□□ 1.32
TARDBP-204ENST00000472476 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
TARDBP-204ENST00000472476 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
TARDBP-204ENST00000472476 RTEL1-TNFRSF6BF6WH68 1400 aa23.24■■□□□ 1.31
TARDBP-204ENST00000472476 PKD2Q13563 968 aa23.23■■□□□ 1.31
TARDBP-204ENST00000472476 DHX29Q7Z478 1369 aaKnown RBP23.22■■□□□ 1.31
TARDBP-204ENST00000472476 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
TARDBP-204ENST00000472476 EHBP1L1Q8N3D4 1523 aa23.22■■□□□ 1.31
TARDBP-204ENST00000472476 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
TARDBP-204ENST00000472476 SPATA31D1Q6ZQQ2 1576 aa23.19■■□□□ 1.3
TARDBP-204ENST00000472476 SOCS7O14512 581 aa23.19■■□□□ 1.3
TARDBP-204ENST00000472476 A2ML1A8K2U0 1454 aa23.17■■□□□ 1.3
TARDBP-204ENST00000472476 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
TARDBP-204ENST00000472476 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms