RNA–Protein interactions for RNA: ENST00000471988.1

MDH1B-206, Transcript of malate dehydrogenase 1B, humanhuman

TSL 2

Gene MDH1B, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1B-206ENST00000471988 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
MDH1B-206ENST00000471988 CDC42BPBQ9Y5S2 1711 aa17.28■□□□□ 0.36
MDH1B-206ENST00000471988 ADGRL1O94910 1474 aa17.28■□□□□ 0.36
MDH1B-206ENST00000471988 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
MDH1B-206ENST00000471988 PREX2Q70Z35 1606 aa17.28■□□□□ 0.36
MDH1B-206ENST00000471988 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
MDH1B-206ENST00000471988 RICTORQ6R327 1708 aa17.27■□□□□ 0.36
MDH1B-206ENST00000471988 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
MDH1B-206ENST00000471988 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
MDH1B-206ENST00000471988 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
MDH1B-206ENST00000471988 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
MDH1B-206ENST00000471988 POGZQ7Z3K3 1410 aa17.23■□□□□ 0.35
MDH1B-206ENST00000471988 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
MDH1B-206ENST00000471988 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
MDH1B-206ENST00000471988 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
MDH1B-206ENST00000471988 LRRC9Q6ZRR7 1453 aa17.21■□□□□ 0.35
MDH1B-206ENST00000471988 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
MDH1B-206ENST00000471988 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
MDH1B-206ENST00000471988 ABCC1P33527 1531 aa17.19■□□□□ 0.34
MDH1B-206ENST00000471988 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
MDH1B-206ENST00000471988 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
MDH1B-206ENST00000471988 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
MDH1B-206ENST00000471988 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
MDH1B-206ENST00000471988 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
MDH1B-206ENST00000471988 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
MDH1B-206ENST00000471988 KDM5CP41229 1560 aa17.17■□□□□ 0.34
MDH1B-206ENST00000471988 SAMD9LQ8IVG5 1584 aa17.17■□□□□ 0.34
MDH1B-206ENST00000471988 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
MDH1B-206ENST00000471988 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
MDH1B-206ENST00000471988 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
MDH1B-206ENST00000471988 KIAA1107Q9UPP5 1409 aa17.15■□□□□ 0.34
MDH1B-206ENST00000471988 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
MDH1B-206ENST00000471988 ZFYVE16Q7Z3T8 1539 aa17.15■□□□□ 0.34
MDH1B-206ENST00000471988 ITSN2Q9NZM3 1697 aa17.14■□□□□ 0.33
MDH1B-206ENST00000471988 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
MDH1B-206ENST00000471988 APLP2Q06481 763 aa17.14■□□□□ 0.33
MDH1B-206ENST00000471988 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
MDH1B-206ENST00000471988 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
MDH1B-206ENST00000471988 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.33
MDH1B-206ENST00000471988 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
MDH1B-206ENST00000471988 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
MDH1B-206ENST00000471988 ATP10AO60312 1499 aa17.1■□□□□ 0.33
MDH1B-206ENST00000471988 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
MDH1B-206ENST00000471988 MBD5Q9P267 1494 aa17.08■□□□□ 0.32
MDH1B-206ENST00000471988 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
MDH1B-206ENST00000471988 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
MDH1B-206ENST00000471988 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
MDH1B-206ENST00000471988 KIDINS220Q9ULH0 1771 aa17.05■□□□□ 0.32
MDH1B-206ENST00000471988 BCORL1Q5H9F3 1711 aa17.05■□□□□ 0.32
MDH1B-206ENST00000471988 SIGLEC1Q9BZZ2 1709 aa17.05■□□□□ 0.32
MDH1B-206ENST00000471988 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
MDH1B-206ENST00000471988 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
MDH1B-206ENST00000471988 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
MDH1B-206ENST00000471988 SPAG9O60271 1321 aaKnown RBP17.04■□□□□ 0.32
MDH1B-206ENST00000471988 REREQ9P2R6 1566 aa17.04■□□□□ 0.32
MDH1B-206ENST00000471988 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
MDH1B-206ENST00000471988 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
MDH1B-206ENST00000471988 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
MDH1B-206ENST00000471988 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
MDH1B-206ENST00000471988 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
MDH1B-206ENST00000471988 ATP7AQ04656 1500 aa17■□□□□ 0.31
MDH1B-206ENST00000471988 ARHGEF5Q12774 1597 aa16.99■□□□□ 0.31
MDH1B-206ENST00000471988 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
MDH1B-206ENST00000471988 AGLP35573 1532 aa16.99■□□□□ 0.31
MDH1B-206ENST00000471988 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
MDH1B-206ENST00000471988 MADDQ8WXG6 1647 aa16.96■□□□□ 0.31
MDH1B-206ENST00000471988 PTPRMP28827 1452 aa16.95■□□□□ 0.3
MDH1B-206ENST00000471988 MLECQ14165 292 aa16.95■□□□□ 0.3
MDH1B-206ENST00000471988 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
MDH1B-206ENST00000471988 A2MP01023 1474 aa16.93■□□□□ 0.3
MDH1B-206ENST00000471988 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
MDH1B-206ENST00000471988 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
MDH1B-206ENST00000471988 TCOF1Q13428 1488 aaKnown RBP16.93■□□□□ 0.3
MDH1B-206ENST00000471988 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
MDH1B-206ENST00000471988 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
MDH1B-206ENST00000471988 ADGBQ8N7X0 1667 aa16.91■□□□□ 0.3
MDH1B-206ENST00000471988 MAST1Q9Y2H9 1570 aa16.9■□□□□ 0.3
MDH1B-206ENST00000471988 RIMS1Q86UR5 1692 aaKnown RBP16.9■□□□□ 0.3
MDH1B-206ENST00000471988 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.3
MDH1B-206ENST00000471988 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
MDH1B-206ENST00000471988 ABCC5O15440 1437 aa16.87■□□□□ 0.29
MDH1B-206ENST00000471988 DAPK1P53355 1430 aa16.85■□□□□ 0.29
MDH1B-206ENST00000471988 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
MDH1B-206ENST00000471988 DNMT1P26358 1616 aaKnown RBP16.84■□□□□ 0.29
MDH1B-206ENST00000471988 CROCC2H7BZ55 1655 aa16.82■□□□□ 0.28
MDH1B-206ENST00000471988 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
MDH1B-206ENST00000471988 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
MDH1B-206ENST00000471988 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
MDH1B-206ENST00000471988 MSH5O43196 834 aa16.81■□□□□ 0.28
MDH1B-206ENST00000471988 GGT6Q6P531 493 aa16.81■□□□□ 0.28
MDH1B-206ENST00000471988 KIF3BO15066 747 aa16.8■□□□□ 0.28
MDH1B-206ENST00000471988 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
MDH1B-206ENST00000471988 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
MDH1B-206ENST00000471988 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
MDH1B-206ENST00000471988 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
MDH1B-206ENST00000471988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.27
MDH1B-206ENST00000471988 MROH2AA6NES4 1674 aa16.76■□□□□ 0.27
MDH1B-206ENST00000471988 C3P01024 1663 aa16.76■□□□□ 0.27
MDH1B-206ENST00000471988 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
MDH1B-206ENST00000471988 NCOA1Q15788 1441 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms