RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MIA2Q96PC5 1412 aa29.37■■■□□ 2.29
PSPC1-203ENST00000471658 KIF13AQ9H1H9 1805 aa29.36■■■□□ 2.29
PSPC1-203ENST00000471658 FAM50AQ14320 339 aaKnown RBP29.35■■■□□ 2.29
PSPC1-203ENST00000471658 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
PSPC1-203ENST00000471658 TRHP20396 242 aaPredicted RBP29.34■■■□□ 2.29
PSPC1-203ENST00000471658 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
PSPC1-203ENST00000471658 TRIM26Q12899 539 aaPredicted RBP29.34■■■□□ 2.29
PSPC1-203ENST00000471658 PTPN23Q9H3S7 1636 aa29.32■■■□□ 2.28
PSPC1-203ENST00000471658 EFCAB2Q5VUJ9 269 aa29.32■■■□□ 2.28
PSPC1-203ENST00000471658 TCOF1Q13428 1488 aaKnown RBP29.28■■■□□ 2.28
PSPC1-203ENST00000471658 ARAP3Q8WWN8 1544 aa29.28■■■□□ 2.28
PSPC1-203ENST00000471658 FANCAO15360 1455 aa29.27■■■□□ 2.28
PSPC1-203ENST00000471658 CAMSAP2Q08AD1 1489 aa29.27■■■□□ 2.28
PSPC1-203ENST00000471658 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.27
PSPC1-203ENST00000471658 TSPOAP1O95153 1857 aa29.25■■■□□ 2.27
PSPC1-203ENST00000471658 ITGAEP38570 1179 aa29.23■■■□□ 2.27
PSPC1-203ENST00000471658 HNRNPMP52272 730 aaKnown RBP eCLIP29.23■■■□□ 2.27
PSPC1-203ENST00000471658 PPRC1Q5VV67 1664 aaKnown RBP29.22■■■□□ 2.27
PSPC1-203ENST00000471658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.2■■■□□ 2.27
PSPC1-203ENST00000471658 AKNAQ7Z591 1439 aa29.2■■■□□ 2.26
PSPC1-203ENST00000471658 PCGF6Q9BYE7 350 aa29.18■■■□□ 2.26
PSPC1-203ENST00000471658 ARHGEF12Q9NZN5 1544 aa29.18■■■□□ 2.26
PSPC1-203ENST00000471658 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
PSPC1-203ENST00000471658 MBD5Q9P267 1494 aa29.14■■■□□ 2.26
PSPC1-203ENST00000471658 NEO1Q92859 1461 aa29.14■■■□□ 2.25
PSPC1-203ENST00000471658 ABCC1P33527 1531 aa29.13■■■□□ 2.25
PSPC1-203ENST00000471658 ADGRL1O94910 1474 aa29.13■■■□□ 2.25
PSPC1-203ENST00000471658 SCAPERQ9BY12 1400 aa29.13■■■□□ 2.25
PSPC1-203ENST00000471658 KIAA1107Q9UPP5 1409 aa29.13■■■□□ 2.25
PSPC1-203ENST00000471658 PLEKHH2Q8IVE3 1493 aa29.12■■■□□ 2.25
PSPC1-203ENST00000471658 TEX14Q8IWB6 1497 aa29.12■■■□□ 2.25
PSPC1-203ENST00000471658 CFAP74Q9C0B2 1584 aa29.12■■■□□ 2.25
PSPC1-203ENST00000471658 ABCC5O15440 1437 aa29.11■■■□□ 2.25
PSPC1-203ENST00000471658 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
PSPC1-203ENST00000471658 DAPK1P53355 1430 aa29.09■■■□□ 2.25
PSPC1-203ENST00000471658 TRAPPC8Q9Y2L5 1435 aa29.09■■■□□ 2.25
PSPC1-203ENST00000471658 AFAP1Q8N556 730 aa29.07■■■□□ 2.24
PSPC1-203ENST00000471658 CHIC2Q9UKJ5 165 aa29.07■■■□□ 2.24
PSPC1-203ENST00000471658 DNMT1P26358 1616 aaKnown RBP29.06■■■□□ 2.24
PSPC1-203ENST00000471658 ARHGEF5Q12774 1597 aa29.05■■■□□ 2.24
PSPC1-203ENST00000471658 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
PSPC1-203ENST00000471658 RAPGEF3O95398 923 aa29.02■■■□□ 2.24
PSPC1-203ENST00000471658 RSPH4AQ5TD94 716 aa29.02■■■□□ 2.24
PSPC1-203ENST00000471658 TSPY4P0CV99 314 aa29■■■□□ 2.23
PSPC1-203ENST00000471658 TSPY10P0CW01 314 aa29■■■□□ 2.23
PSPC1-203ENST00000471658 DENND4BO75064 1496 aaPredicted RBP28.99■■■□□ 2.23
PSPC1-203ENST00000471658 COL17A1Q9UMD9 1497 aaPredicted RBP28.98■■■□□ 2.23
PSPC1-203ENST00000471658 POGZQ7Z3K3 1410 aa28.97■■■□□ 2.23
PSPC1-203ENST00000471658 CROCC2H7BZ55 1655 aa28.95■■■□□ 2.23
PSPC1-203ENST00000471658 C9orf84Q5VXU9 1444 aa28.94■■■□□ 2.22
PSPC1-203ENST00000471658 SPAG9O60271 1321 aaKnown RBP28.93■■■□□ 2.22
PSPC1-203ENST00000471658 RRP7BPQ9NSQ0 103 aa28.93■■■□□ 2.22
PSPC1-203ENST00000471658 ZNF518AQ6AHZ1 1483 aa28.93■■■□□ 2.22
PSPC1-203ENST00000471658 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
PSPC1-203ENST00000471658 RICTORQ6R327 1708 aa28.9■■■□□ 2.22
PSPC1-203ENST00000471658 FRMPD1Q5SYB0 1578 aa28.89■■■□□ 2.22
PSPC1-203ENST00000471658 MYT1LQ9UL68 1186 aa28.89■■■□□ 2.22
PSPC1-203ENST00000471658 KDM5CP41229 1560 aa28.87■■■□□ 2.21
PSPC1-203ENST00000471658 MAST1Q9Y2H9 1570 aa28.87■■■□□ 2.21
PSPC1-203ENST00000471658 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
PSPC1-203ENST00000471658 ROCK1Q13464 1354 aa28.85■■■□□ 2.21
PSPC1-203ENST00000471658 ADGRL2O95490 1459 aa28.85■■■□□ 2.21
PSPC1-203ENST00000471658 ANKRD30AQ9BXX3 1397 aa28.85■■■□□ 2.21
PSPC1-203ENST00000471658 RTEL1-TNFRSF6BF6WH68 1400 aa28.83■■■□□ 2.21
PSPC1-203ENST00000471658 ZFYVE16Q7Z3T8 1539 aa28.82■■■□□ 2.2
PSPC1-203ENST00000471658 ADGBQ8N7X0 1667 aa28.82■■■□□ 2.2
PSPC1-203ENST00000471658 ATP7AQ04656 1500 aa28.81■■■□□ 2.2
PSPC1-203ENST00000471658 INO80Q9ULG1 1556 aaPredicted RBP28.81■■■□□ 2.2
PSPC1-203ENST00000471658 MLH3Q9UHC1 1453 aa28.8■■■□□ 2.2
PSPC1-203ENST00000471658 NAIPQ13075 1403 aa28.8■■■□□ 2.2
PSPC1-203ENST00000471658 KIDINS220Q9ULH0 1771 aa28.79■■■□□ 2.2
PSPC1-203ENST00000471658 HFM1A2PYH4 1435 aa28.79■■■□□ 2.2
PSPC1-203ENST00000471658 KDM6BO15054 1643 aa28.79■■■□□ 2.2
PSPC1-203ENST00000471658 KIF15Q9NS87 1388 aa28.78■■■□□ 2.2
PSPC1-203ENST00000471658 HECW2Q9P2P5 1572 aa28.78■■■□□ 2.2
PSPC1-203ENST00000471658 SETD5Q9C0A6 1442 aa28.76■■■□□ 2.19
PSPC1-203ENST00000471658 ZMYM4Q5VZL5 1548 aa28.76■■■□□ 2.19
PSPC1-203ENST00000471658 YEATS2Q9ULM3 1422 aa28.75■■■□□ 2.19
PSPC1-203ENST00000471658 PLXNC1O60486 1568 aa28.74■■■□□ 2.19
PSPC1-203ENST00000471658 RAB3GAP2Q9H2M9 1393 aa28.71■■■□□ 2.19
PSPC1-203ENST00000471658 ABCA6Q8N139 1617 aa28.7■■■□□ 2.18
PSPC1-203ENST00000471658 GCC2Q8IWJ2 1684 aa28.7■■■□□ 2.18
PSPC1-203ENST00000471658 MAGI2Q86UL8 1455 aa28.69■■■□□ 2.18
PSPC1-203ENST00000471658 ANKRD50Q9ULJ7 1429 aa28.68■■■□□ 2.18
PSPC1-203ENST00000471658 DIP2CQ9Y2E4 1556 aa28.67■■■□□ 2.18
PSPC1-203ENST00000471658 DUOX2Q9NRD8 1548 aa28.66■■■□□ 2.18
PSPC1-203ENST00000471658 DHX29Q7Z478 1369 aaKnown RBP28.65■■■□□ 2.18
PSPC1-203ENST00000471658 A2MP01023 1474 aa28.63■■■□□ 2.17
PSPC1-203ENST00000471658 ATP10AO60312 1499 aa28.6■■■□□ 2.17
PSPC1-203ENST00000471658 ARHGEF40Q8TER5 1519 aa28.58■■■□□ 2.17
PSPC1-203ENST00000471658 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
PSPC1-203ENST00000471658 HRCP23327 699 aa28.57■■■□□ 2.16
PSPC1-203ENST00000471658 KIF3BO15066 747 aa28.56■■■□□ 2.16
PSPC1-203ENST00000471658 TRIM52Q96A61 297 aa28.54■■■□□ 2.16
PSPC1-203ENST00000471658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.51■■■□□ 2.154e-7■■■■□ 22.7
PSPC1-203ENST00000471658 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
PSPC1-203ENST00000471658 REREQ9P2R6 1566 aa28.47■■■□□ 2.15
PSPC1-203ENST00000471658 EIF2AK4Q9P2K8 1649 aaKnown RBP28.46■■■□□ 2.15
PSPC1-203ENST00000471658 GGT6Q6P531 493 aa28.46■■■□□ 2.15
PSPC1-203ENST00000471658 NUP155O75694 1391 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms