RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RAPGEF6Q8TEU7 1601 aa15.37■□□□□ 0.05
CPSF4-211ENST00000471455 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
CPSF4-211ENST00000471455 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-211ENST00000471455 P3H3Q8IVL6 736 aa15.37■□□□□ 0.05
CPSF4-211ENST00000471455 EEA1Q15075 1411 aa15.36■□□□□ 0.05
CPSF4-211ENST00000471455 NEO1Q92859 1461 aa15.36■□□□□ 0.05
CPSF4-211ENST00000471455 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
CPSF4-211ENST00000471455 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.04
CPSF4-211ENST00000471455 CFAP74Q9C0B2 1584 aa15.27■□□□□ 0.03
CPSF4-211ENST00000471455 ADAMTSL3P82987 1691 aa15.26■□□□□ 0.03
CPSF4-211ENST00000471455 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
CPSF4-211ENST00000471455 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
CPSF4-211ENST00000471455 PTPRMP28827 1452 aa15.26■□□□□ 0.03
CPSF4-211ENST00000471455 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
CPSF4-211ENST00000471455 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
CPSF4-211ENST00000471455 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
CPSF4-211ENST00000471455 ARHGEF40Q8TER5 1519 aa15.23■□□□□ 0.03
CPSF4-211ENST00000471455 DENND4BO75064 1496 aaPredicted RBP15.23■□□□□ 0.03
CPSF4-211ENST00000471455 BCORL1Q5H9F3 1711 aa15.23■□□□□ 0.03
CPSF4-211ENST00000471455 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-211ENST00000471455 FANCAO15360 1455 aa15.21■□□□□ 0.03
CPSF4-211ENST00000471455 POGZQ7Z3K3 1410 aa15.2■□□□□ 0.02
CPSF4-211ENST00000471455 AKNAQ7Z591 1439 aa15.2■□□□□ 0.02
CPSF4-211ENST00000471455 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
CPSF4-211ENST00000471455 RICTORQ6R327 1708 aa15.18■□□□□ 0.02
CPSF4-211ENST00000471455 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-211ENST00000471455 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-211ENST00000471455 PCF11O94913 1555 aaKnown RBP15.18■□□□□ 0.02
CPSF4-211ENST00000471455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.02
CPSF4-211ENST00000471455 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
CPSF4-211ENST00000471455 MAGI2Q86UL8 1455 aa15.16■□□□□ 0.02
CPSF4-211ENST00000471455 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
CPSF4-211ENST00000471455 ZFYVE16Q7Z3T8 1539 aa15.15■□□□□ 0.02
CPSF4-211ENST00000471455 FBXO41Q8TF61 875 aa15.14■□□□□ 0.01
CPSF4-211ENST00000471455 RIMS1Q86UR5 1692 aaKnown RBP15.13■□□□□ 0.01
CPSF4-211ENST00000471455 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
CPSF4-211ENST00000471455 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
CPSF4-211ENST00000471455 LMTK3Q96Q04 1460 aa15.12■□□□□ 0.01
CPSF4-211ENST00000471455 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-211ENST00000471455 CDK13Q14004 1512 aaKnown RBP15.11■□□□□ 0.01
CPSF4-211ENST00000471455 PLCH2O75038 1416 aa15.1■□□□□ 0.01
CPSF4-211ENST00000471455 UBTFP17480 764 aaKnown RBP15.08■□□□□ 0
CPSF4-211ENST00000471455 SCAPERQ9BY12 1400 aa15.08■□□□□ 0
CPSF4-211ENST00000471455 MYO5CQ9NQX4 1742 aa15.07■□□□□ 0
CPSF4-211ENST00000471455 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
CPSF4-211ENST00000471455 EFCAB2Q5VUJ9 269 aa15.06■□□□□ 0
CPSF4-211ENST00000471455 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
CPSF4-211ENST00000471455 CLIP1P30622 1438 aa15.06■□□□□ 0
CPSF4-211ENST00000471455 KIF14Q15058 1648 aa15.06■□□□□ 0
CPSF4-211ENST00000471455 C9orf84Q5VXU9 1444 aa15.05■□□□□ -0
CPSF4-211ENST00000471455 FER1L4A9Z1Z3 1794 aa15.05■□□□□ -0
CPSF4-211ENST00000471455 ATP10AO60312 1499 aa15.04■□□□□ -0
CPSF4-211ENST00000471455 ZNF518AQ6AHZ1 1483 aa15.03■□□□□ -0
CPSF4-211ENST00000471455 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
CPSF4-211ENST00000471455 TROQ12816 1431 aaPredicted RBP15.02■□□□□ -0
CPSF4-211ENST00000471455 MLECQ14165 292 aa15.02■□□□□ -0
CPSF4-211ENST00000471455 ARHGAP5Q13017 1502 aa15.01□□□□□ -0.01
CPSF4-211ENST00000471455 ARHGEF12Q9NZN5 1544 aa15.01□□□□□ -0.01
CPSF4-211ENST00000471455 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
CPSF4-211ENST00000471455 HSPA2P54652 639 aa14.98□□□□□ -0.01
CPSF4-211ENST00000471455 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
CPSF4-211ENST00000471455 KDM5CP41229 1560 aa14.98□□□□□ -0.01
CPSF4-211ENST00000471455 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
CPSF4-211ENST00000471455 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
CPSF4-211ENST00000471455 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
CPSF4-211ENST00000471455 REREQ9P2R6 1566 aa14.94□□□□□ -0.02
CPSF4-211ENST00000471455 PREX2Q70Z35 1606 aa14.92□□□□□ -0.02
CPSF4-211ENST00000471455 MLH3Q9UHC1 1453 aa14.92□□□□□ -0.02
CPSF4-211ENST00000471455 DIP2CQ9Y2E4 1556 aa14.92□□□□□ -0.02
CPSF4-211ENST00000471455 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
CPSF4-211ENST00000471455 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
CPSF4-211ENST00000471455 AFAP1Q8N556 730 aa14.91□□□□□ -0.02
CPSF4-211ENST00000471455 CERKQ8TCT0 537 aa14.91□□□□□ -0.02
CPSF4-211ENST00000471455 ESF1Q9H501 851 aaKnown RBP14.91□□□□□ -0.02
CPSF4-211ENST00000471455 ABCC1P33527 1531 aa14.91□□□□□ -0.02
CPSF4-211ENST00000471455 AGLP35573 1532 aa14.89□□□□□ -0.03
CPSF4-211ENST00000471455 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
CPSF4-211ENST00000471455 LRRIQ1Q96JM4 1722 aa14.89□□□□□ -0.03
CPSF4-211ENST00000471455 CDC42BPBQ9Y5S2 1711 aa14.89□□□□□ -0.03
CPSF4-211ENST00000471455 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
CPSF4-211ENST00000471455 ITSN2Q9NZM3 1697 aa14.87□□□□□ -0.03
CPSF4-211ENST00000471455 CNTLNQ9NXG0 1405 aa14.87□□□□□ -0.03
CPSF4-211ENST00000471455 FYCO1Q9BQS8 1478 aa14.87□□□□□ -0.03
CPSF4-211ENST00000471455 CEBPAP49715 358 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-211ENST00000471455 TRAPPC8Q9Y2L5 1435 aa14.84□□□□□ -0.03
CPSF4-211ENST00000471455 C3P01024 1663 aa14.83□□□□□ -0.04
CPSF4-211ENST00000471455 CDC42BPAQ5VT25 1732 aa14.82□□□□□ -0.04
CPSF4-211ENST00000471455 SPDYE2BA6NHP3 402 aa14.81□□□□□ -0.04
CPSF4-211ENST00000471455 SPDYE6P0CI01 402 aa14.81□□□□□ -0.04
CPSF4-211ENST00000471455 SPDYE2Q495Y8 402 aa14.81□□□□□ -0.04
CPSF4-211ENST00000471455 PTPRTO14522 1441 aa14.81□□□□□ -0.04
CPSF4-211ENST00000471455 PLEKHH2Q8IVE3 1493 aa14.81□□□□□ -0.04
CPSF4-211ENST00000471455 STRCQ7RTU9 1775 aa14.8□□□□□ -0.04
CPSF4-211ENST00000471455 KIDINS220Q9ULH0 1771 aa14.8□□□□□ -0.04
CPSF4-211ENST00000471455 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
CPSF4-211ENST00000471455 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
CPSF4-211ENST00000471455 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
CPSF4-211ENST00000471455 NPATQ14207 1427 aa14.78□□□□□ -0.04
CPSF4-211ENST00000471455 SPAG9O60271 1321 aaKnown RBP14.78□□□□□ -0.04
CPSF4-211ENST00000471455 ZNF777Q9ULD5 760 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 591.9 ms