RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, human

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BUD23-215	ENST00000471215	TSPY4	P0CV99	314 aa		13.69	□□□□□ -0.22
BUD23-215	ENST00000471215	TSPY10	P0CW01	314 aa		13.69	□□□□□ -0.22
BUD23-215	ENST00000471215	LRRIQ1	Q96JM4	1722 aa		13.68	□□□□□ -0.22
BUD23-215	ENST00000471215	CARMIL2	Q6F5E8	1435 aa		13.68	□□□□□ -0.22
BUD23-215	ENST00000471215	TCOF1	Q13428	1488 aa	Known RBP	13.68	□□□□□ -0.22
BUD23-215	ENST00000471215	PRG4	Q92954	1404 aa	Predicted RBP	13.68	□□□□□ -0.22
BUD23-215	ENST00000471215	DAPK1	P53355	1430 aa		13.67	□□□□□ -0.22
BUD23-215	ENST00000471215	MRS2	Q9HD23	443 aa		13.67	□□□□□ -0.22
BUD23-215	ENST00000471215	IRX6	P78412	446 aa	Predicted RBP	13.66	□□□□□ -0.22
BUD23-215	ENST00000471215	PKD2	Q13563	968 aa		13.66	□□□□□ -0.22
BUD23-215	ENST00000471215	WDR62	O43379	1518 aa		13.66	□□□□□ -0.22
BUD23-215	ENST00000471215	GRIN2A	Q12879	1464 aa		13.66	□□□□□ -0.22
BUD23-215	ENST00000471215	MYT1	Q01538	1121 aa		13.65	□□□□□ -0.22
BUD23-215	ENST00000471215	NBPF8	Q3BBV2	869 aa		13.65	□□□□□ -0.22
BUD23-215	ENST00000471215	TSHZ2	Q9NRE2	1034 aa		13.65	□□□□□ -0.22
BUD23-215	ENST00000471215	ABCC5	O15440	1437 aa		13.65	□□□□□ -0.22
BUD23-215	ENST00000471215	KDM2A	Q9Y2K7	1162 aa		13.65	□□□□□ -0.22
BUD23-215	ENST00000471215	ARHGEF11	O15085	1522 aa		13.64	□□□□□ -0.23
BUD23-215	ENST00000471215	AKNA	Q7Z591	1439 aa		13.63	□□□□□ -0.23
BUD23-215	ENST00000471215	NUP153	P49790	1475 aa	Known RBP	13.63	□□□□□ -0.23
BUD23-215	ENST00000471215	PLB1	Q6P1J6	1458 aa		13.62	□□□□□ -0.23
BUD23-215	ENST00000471215	ROCK1	Q13464	1354 aa		13.62	□□□□□ -0.23
BUD23-215	ENST00000471215	DISP1	Q96F81	1524 aa		13.62	□□□□□ -0.23
BUD23-215	ENST00000471215	TRO	Q12816	1431 aa	Predicted RBP	13.62	□□□□□ -0.23
BUD23-215	ENST00000471215	ANKRD30A	Q9BXX3	1397 aa		13.62	□□□□□ -0.23
BUD23-215	ENST00000471215	ANKRD30B	Q9BXX2	1392 aa		13.61	□□□□□ -0.23
BUD23-215	ENST00000471215	C11orf95	C9JLR9	678 aa	Predicted RBP	13.61	□□□□□ -0.23
BUD23-215	ENST00000471215	KDM6B	O15054	1643 aa		13.6	□□□□□ -0.23
BUD23-215	ENST00000471215	KIAA0556	O60303	1618 aa		13.6	□□□□□ -0.23
BUD23-215	ENST00000471215	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
BUD23-215	ENST00000471215	NUP155	O75694	1391 aa		13.59	□□□□□ -0.23
BUD23-215	ENST00000471215	CCDC7	Q96M83	1385 aa		13.59	□□□□□ -0.23
BUD23-215	ENST00000471215	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.59	□□□□□ -0.23
BUD23-215	ENST00000471215	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
BUD23-215	ENST00000471215	CCDC184	Q52MB2	194 aa		13.58	□□□□□ -0.24
BUD23-215	ENST00000471215	RAPGEF6	Q8TEU7	1601 aa		13.57	□□□□□ -0.24
BUD23-215	ENST00000471215	SYNJ2	O15056	1496 aa		13.57	□□□□□ -0.24
BUD23-215	ENST00000471215	CARD11	Q9BXL7	1154 aa		13.56	□□□□□ -0.24
BUD23-215	ENST00000471215	KIF7	Q2M1P5	1343 aa		13.56	□□□□□ -0.24
BUD23-215	ENST00000471215	CNTLN	Q9NXG0	1405 aa		13.56	□□□□□ -0.24
BUD23-215	ENST00000471215	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.56	□□□□□ -0.24
BUD23-215	ENST00000471215	CAMSAP2	Q08AD1	1489 aa		13.55	□□□□□ -0.24
BUD23-215	ENST00000471215	EIF4G3	O43432	1585 aa	Known RBP	13.55	□□□□□ -0.24
BUD23-215	ENST00000471215	DENND4B	O75064	1496 aa	Predicted RBP	13.55	□□□□□ -0.24
BUD23-215	ENST00000471215	GCC2	Q8IWJ2	1684 aa		13.55	□□□□□ -0.24
BUD23-215	ENST00000471215	RPRD2	Q5VT52	1461 aa	Known RBP	13.55	□□□□□ -0.24
BUD23-215	ENST00000471215	NCOA1	Q15788	1441 aa		13.55	□□□□□ -0.24
BUD23-215	ENST00000471215	SENP3-EIF4A1	A0A087X0R7	540 aa		13.54	□□□□□ -0.24
BUD23-215	ENST00000471215	DCAF11	Q8TEB1	546 aa		13.54	□□□□□ -0.24
BUD23-215	ENST00000471215	RGL3	Q3MIN7	710 aa		13.54	□□□□□ -0.24
BUD23-215	ENST00000471215	ANKRD50	Q9ULJ7	1429 aa		13.54	□□□□□ -0.24
BUD23-215	ENST00000471215	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.53	□□□□□ -0.24
BUD23-215	ENST00000471215	PTPRG	P23470	1445 aa		13.52	□□□□□ -0.25
BUD23-215	ENST00000471215	TMC1	Q8TDI8	760 aa		13.51	□□□□□ -0.25
BUD23-215	ENST00000471215	KDM5B	Q9UGL1	1544 aa		13.5	□□□□□ -0.25
BUD23-215	ENST00000471215	KIAA1107	Q9UPP5	1409 aa		13.5	□□□□□ -0.25
BUD23-215	ENST00000471215	DNMT1	P26358	1616 aa	Known RBP	13.5	□□□□□ -0.25
BUD23-215	ENST00000471215	USP47	Q96K76	1375 aa		13.5	□□□□□ -0.25
BUD23-215	ENST00000471215	MYT1L	Q9UL68	1186 aa		13.49	□□□□□ -0.25
BUD23-215	ENST00000471215	CEP170	Q5SW79	1584 aa		13.47	□□□□□ -0.25
BUD23-215	ENST00000471215	C9orf84	Q5VXU9	1444 aa		13.47	□□□□□ -0.25
BUD23-215	ENST00000471215	RBM19	Q9Y4C8	960 aa	Known RBP	13.47	□□□□□ -0.25
BUD23-215	ENST00000471215	KIF15	Q9NS87	1388 aa		13.47	□□□□□ -0.25
BUD23-215	ENST00000471215	ST20-MTHFS	A0A0A6YYL1	179 aa		13.46	□□□□□ -0.26
BUD23-215	ENST00000471215	ATP10B	O94823	1461 aa		13.45	□□□□□ -0.26
BUD23-215	ENST00000471215	PZP	P20742	1482 aa		13.45	□□□□□ -0.26
BUD23-215	ENST00000471215	KIF14	Q15058	1648 aa		13.44	□□□□□ -0.26
BUD23-215	ENST00000471215	TEX14	Q8IWB6	1497 aa		13.44	□□□□□ -0.26
BUD23-215	ENST00000471215	NUP160	Q12769	1436 aa		13.43	□□□□□ -0.26
BUD23-215	ENST00000471215	RSPH4A	Q5TD94	716 aa		13.43	□□□□□ -0.26
BUD23-215	ENST00000471215	ERICH6	Q7L0X2	663 aa		13.43	□□□□□ -0.26
BUD23-215	ENST00000471215	PPP4R2	Q9NY27	417 aa		13.43	□□□□□ -0.26
BUD23-215	ENST00000471215	SALL2	Q9Y467	1007 aa	Predicted RBP	13.43	□□□□□ -0.26
BUD23-215	ENST00000471215	ZBED9	Q6R2W3	1325 aa		13.42	□□□□□ -0.26
BUD23-215	ENST00000471215	B4GALNT3	Q6L9W6	998 aa		13.42	□□□□□ -0.26
BUD23-215	ENST00000471215	ITSN2	Q9NZM3	1697 aa		13.41	□□□□□ -0.26
BUD23-215	ENST00000471215	ROCK2	O75116	1388 aa	Known RBP	13.41	□□□□□ -0.26
BUD23-215	ENST00000471215	SPATA31E1	Q6ZUB1	1445 aa		13.38	□□□□□ -0.27
BUD23-215	ENST00000471215	ADGRL2	O95490	1459 aa		13.38	□□□□□ -0.27
BUD23-215	ENST00000471215	ANP32E	Q9BTT0	268 aa		13.38	□□□□□ -0.27
BUD23-215	ENST00000471215	ERICH6B	Q5W0A0	696 aa		13.37	□□□□□ -0.27
BUD23-215	ENST00000471215	CCDC144A	A2RUR9	1427 aa		13.37	□□□□□ -0.27
BUD23-215	ENST00000471215	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.36	□□□□□ -0.27
BUD23-215	ENST00000471215	EFCAB2	Q5VUJ9	269 aa		13.34	□□□□□ -0.27
BUD23-215	ENST00000471215	CCDC136	Q96JN2	1154 aa		13.34	□□□□□ -0.27
BUD23-215	ENST00000471215	NBPF1	Q3BBV0	1214 aa		13.34	□□□□□ -0.27
BUD23-215	ENST00000471215	ABCC10	Q5T3U5	1492 aa		13.33	□□□□□ -0.28
BUD23-215	ENST00000471215	CC2D1B	Q5T0F9	858 aa	Known RBP	13.33	□□□□□ -0.28
BUD23-215	ENST00000471215	NUDC	Q9Y266	331 aa		13.33	□□□□□ -0.28
BUD23-215	ENST00000471215	ARHGAP5	Q13017	1502 aa		13.33	□□□□□ -0.28
BUD23-215	ENST00000471215	CCDC141	Q6ZP82	1450 aa		13.33	□□□□□ -0.28
BUD23-215	ENST00000471215	RALBP1	Q15311	655 aa		13.32	□□□□□ -0.28
BUD23-215	ENST00000471215	ABCA8	O94911	1581 aa		13.32	□□□□□ -0.28
BUD23-215	ENST00000471215	ADGB	Q8N7X0	1667 aa		13.32	□□□□□ -0.28
BUD23-215	ENST00000471215	PNISR	Q8TF01	805 aa	Known RBP	13.31	□□□□□ -0.28
BUD23-215	ENST00000471215	DHX29	Q7Z478	1369 aa	Known RBP	13.3	□□□□□ -0.28
BUD23-215	ENST00000471215	SHANK2	Q9UPX8	1470 aa		13.3	□□□□□ -0.28
BUD23-215	ENST00000471215	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.3	□□□□□ -0.28
BUD23-215	ENST00000471215	TMF1	P82094	1093 aa		13.28	□□□□□ -0.28
BUD23-215	ENST00000471215	ADCY10	Q96PN6	1610 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms