RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
HDLBP-233ENST00000470710 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
HDLBP-233ENST00000470710 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
HDLBP-233ENST00000470710 CDC42BPAQ5VT25 1732 aa13.15□□□□□ -0.3
HDLBP-233ENST00000470710 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
HDLBP-233ENST00000470710 ZNF644Q9H582 1327 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-233ENST00000470710 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
HDLBP-233ENST00000470710 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
HDLBP-233ENST00000470710 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
HDLBP-233ENST00000470710 KIAA1107Q9UPP5 1409 aa13.12□□□□□ -0.31
HDLBP-233ENST00000470710 GLI2P10070 1586 aa13.11□□□□□ -0.31
HDLBP-233ENST00000470710 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
HDLBP-233ENST00000470710 ITGAEP38570 1179 aa13.11□□□□□ -0.31
HDLBP-233ENST00000470710 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-233ENST00000470710 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
HDLBP-233ENST00000470710 ABCC5O15440 1437 aa13.1□□□□□ -0.31
HDLBP-233ENST00000470710 DAPK1P53355 1430 aa13.1□□□□□ -0.31
HDLBP-233ENST00000470710 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
HDLBP-233ENST00000470710 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
HDLBP-233ENST00000470710 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
HDLBP-233ENST00000470710 MBD5Q9P267 1494 aa13.09□□□□□ -0.31
HDLBP-233ENST00000470710 SAMD9LQ8IVG5 1584 aa13.08□□□□□ -0.32
HDLBP-233ENST00000470710 DNMT1P26358 1616 aaKnown RBP13.08□□□□□ -0.32
HDLBP-233ENST00000470710 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
HDLBP-233ENST00000470710 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
HDLBP-233ENST00000470710 FANCAO15360 1455 aa13.07□□□□□ -0.32
HDLBP-233ENST00000470710 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
HDLBP-233ENST00000470710 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
HDLBP-233ENST00000470710 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
HDLBP-233ENST00000470710 FAM69CQ0P6D2 419 aa13.06□□□□□ -0.32
HDLBP-233ENST00000470710 ABCC1P33527 1531 aa13.05□□□□□ -0.32
HDLBP-233ENST00000470710 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDLBP-233ENST00000470710 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
HDLBP-233ENST00000470710 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
HDLBP-233ENST00000470710 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
HDLBP-233ENST00000470710 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
HDLBP-233ENST00000470710 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
HDLBP-233ENST00000470710 NEO1Q92859 1461 aa13.04□□□□□ -0.32
HDLBP-233ENST00000470710 ARHGEF12Q9NZN5 1544 aa13.03□□□□□ -0.32
HDLBP-233ENST00000470710 MAP3K4Q9Y6R4 1608 aa13.03□□□□□ -0.32
HDLBP-233ENST00000470710 HRCP23327 699 aa13.03□□□□□ -0.32
HDLBP-233ENST00000470710 TSPY4P0CV99 314 aa13.02□□□□□ -0.33
HDLBP-233ENST00000470710 TSPY10P0CW01 314 aa13.02□□□□□ -0.33
HDLBP-233ENST00000470710 NAIPQ13075 1403 aa13.02□□□□□ -0.33
HDLBP-233ENST00000470710 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
HDLBP-233ENST00000470710 ADGRL1O94910 1474 aa13.02□□□□□ -0.33
HDLBP-233ENST00000470710 CFAP74Q9C0B2 1584 aa13.02□□□□□ -0.33
HDLBP-233ENST00000470710 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
HDLBP-233ENST00000470710 NCOA1Q15788 1441 aa13□□□□□ -0.33
HDLBP-233ENST00000470710 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
HDLBP-233ENST00000470710 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
HDLBP-233ENST00000470710 ANKRD30AQ9BXX3 1397 aa13□□□□□ -0.33
HDLBP-233ENST00000470710 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
HDLBP-233ENST00000470710 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
HDLBP-233ENST00000470710 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
HDLBP-233ENST00000470710 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
HDLBP-233ENST00000470710 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
HDLBP-233ENST00000470710 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
HDLBP-233ENST00000470710 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
HDLBP-233ENST00000470710 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.34
HDLBP-233ENST00000470710 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.34
HDLBP-233ENST00000470710 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
HDLBP-233ENST00000470710 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
HDLBP-233ENST00000470710 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
HDLBP-233ENST00000470710 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
HDLBP-233ENST00000470710 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
HDLBP-233ENST00000470710 DENND4BO75064 1496 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-233ENST00000470710 KIF13AQ9H1H9 1805 aa12.93□□□□□ -0.34
HDLBP-233ENST00000470710 PLXNC1O60486 1568 aa12.93□□□□□ -0.34
HDLBP-233ENST00000470710 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
HDLBP-233ENST00000470710 KDM5CP41229 1560 aa12.92□□□□□ -0.34
HDLBP-233ENST00000470710 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
HDLBP-233ENST00000470710 ZFYVE16Q7Z3T8 1539 aa12.92□□□□□ -0.34
HDLBP-233ENST00000470710 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
HDLBP-233ENST00000470710 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-233ENST00000470710 DHX57Q6P158 1386 aaKnown RBP12.9□□□□□ -0.34
HDLBP-233ENST00000470710 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
HDLBP-233ENST00000470710 ATP7AQ04656 1500 aa12.89□□□□□ -0.35
HDLBP-233ENST00000470710 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
HDLBP-233ENST00000470710 RAPGEF3O95398 923 aa12.88□□□□□ -0.35
HDLBP-233ENST00000470710 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
HDLBP-233ENST00000470710 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
HDLBP-233ENST00000470710 KDM6BO15054 1643 aa12.87□□□□□ -0.35
HDLBP-233ENST00000470710 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-233ENST00000470710 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
HDLBP-233ENST00000470710 HECW2Q9P2P5 1572 aa12.86□□□□□ -0.35
HDLBP-233ENST00000470710 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
HDLBP-233ENST00000470710 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
HDLBP-233ENST00000470710 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
HDLBP-233ENST00000470710 RICTORQ6R327 1708 aa12.85□□□□□ -0.35
HDLBP-233ENST00000470710 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
HDLBP-233ENST00000470710 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
HDLBP-233ENST00000470710 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
HDLBP-233ENST00000470710 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
HDLBP-233ENST00000470710 COL17A1Q9UMD9 1497 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-233ENST00000470710 KDM5DQ9BY66 1539 aa12.82□□□□□ -0.36
HDLBP-233ENST00000470710 A2MP01023 1474 aa12.81□□□□□ -0.36
HDLBP-233ENST00000470710 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-233ENST00000470710 MPHOSPH9Q99550 1183 aa12.8□□□□□ -0.36
HDLBP-233ENST00000470710 NUP155O75694 1391 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms