RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 TROQ12816 1431 aaPredicted RBP31.78■■■□□ 2.68
GCFC2-207ENST00000470503 YEATS2Q9ULM3 1422 aa31.78■■■□□ 2.68
GCFC2-207ENST00000470503 CLIP1P30622 1438 aa31.76■■■□□ 2.68
GCFC2-207ENST00000470503 PCF11O94913 1555 aaKnown RBP31.73■■■□□ 2.67
GCFC2-207ENST00000470503 ATP10AO60312 1499 aa31.71■■■□□ 2.67
GCFC2-207ENST00000470503 KIF14Q15058 1648 aa31.7■■■□□ 2.66
GCFC2-207ENST00000470503 LMTK3Q96Q04 1460 aa31.7■■■□□ 2.66
GCFC2-207ENST00000470503 MYO5CQ9NQX4 1742 aa31.68■■■□□ 2.66
GCFC2-207ENST00000470503 RIMS1Q86UR5 1692 aaKnown RBP31.67■■■□□ 2.66
GCFC2-207ENST00000470503 C9orf84Q5VXU9 1444 aa31.66■■■□□ 2.66
GCFC2-207ENST00000470503 ZNF518AQ6AHZ1 1483 aa31.66■■■□□ 2.66
GCFC2-207ENST00000470503 FBXO41Q8TF61 875 aa31.65■■■□□ 2.66
GCFC2-207ENST00000470503 MLECQ14165 292 aa31.64■■■□□ 2.66
GCFC2-207ENST00000470503 CASKIN1Q8WXD9 1431 aa31.64■■■□□ 2.66
GCFC2-207ENST00000470503 ARHGAP5Q13017 1502 aa31.63■■■□□ 2.65
GCFC2-207ENST00000470503 CCDC18Q5T9S5 1454 aa31.62■■■□□ 2.65
GCFC2-207ENST00000470503 AFAP1Q8N556 730 aa31.59■■■□□ 2.65
GCFC2-207ENST00000470503 KDM5CP41229 1560 aa31.56■■■□□ 2.64
GCFC2-207ENST00000470503 SIGLEC1Q9BZZ2 1709 aa31.55■■■□□ 2.64
GCFC2-207ENST00000470503 ARHGEF12Q9NZN5 1544 aa31.55■■■□□ 2.64
GCFC2-207ENST00000470503 PLPPR3Q6T4P5 718 aa31.54■■■□□ 2.64
GCFC2-207ENST00000470503 MYT1LQ9UL68 1186 aa31.53■■■□□ 2.64
GCFC2-207ENST00000470503 HSPA2P54652 639 aa31.51■■■□□ 2.63
GCFC2-207ENST00000470503 MLH3Q9UHC1 1453 aa31.51■■■□□ 2.63
GCFC2-207ENST00000470503 FER1L4A9Z1Z3 1794 aa31.49■■■□□ 2.63
GCFC2-207ENST00000470503 LRRIQ1Q96JM4 1722 aa31.47■■■□□ 2.63
GCFC2-207ENST00000470503 FYCO1Q9BQS8 1478 aa31.46■■■□□ 2.63
GCFC2-207ENST00000470503 REREQ9P2R6 1566 aa31.46■■■□□ 2.63
GCFC2-207ENST00000470503 CDC42BPBQ9Y5S2 1711 aa31.43■■■□□ 2.62
GCFC2-207ENST00000470503 PREX2Q70Z35 1606 aa31.42■■■□□ 2.62
GCFC2-207ENST00000470503 TRAPPC8Q9Y2L5 1435 aa31.41■■■□□ 2.62
GCFC2-207ENST00000470503 ABCC1P33527 1531 aa31.4■■■□□ 2.62
GCFC2-207ENST00000470503 DIP2CQ9Y2E4 1556 aa31.39■■■□□ 2.62
GCFC2-207ENST00000470503 AGLP35573 1532 aa31.39■■■□□ 2.61
GCFC2-207ENST00000470503 CEBPAP49715 358 aaPredicted RBP31.37■■■□□ 2.61
GCFC2-207ENST00000470503 ESF1Q9H501 851 aaKnown RBP31.36■■■□□ 2.61
GCFC2-207ENST00000470503 DMRT2Q9Y5R5 561 aa31.34■■■□□ 2.61
GCFC2-207ENST00000470503 SETD1BQ9UPS6 1966 aaKnown RBP31.3■■■□□ 2.6
GCFC2-207ENST00000470503 PREX1Q8TCU6 1659 aa31.3■■■□□ 2.6
GCFC2-207ENST00000470503 ABCA6Q8N139 1617 aa31.3■■■□□ 2.6
GCFC2-207ENST00000470503 UHRF1BP1Q6BDS2 1440 aa31.3■■■□□ 2.6
GCFC2-207ENST00000470503 GPATCH8Q9UKJ3 1502 aaKnown RBP31.29■■■□□ 2.6
GCFC2-207ENST00000470503 ITSN2Q9NZM3 1697 aa31.29■■■□□ 2.6
GCFC2-207ENST00000470503 ZNF777Q9ULD5 760 aaPredicted RBP31.29■■■□□ 2.6
GCFC2-207ENST00000470503 CNTLNQ9NXG0 1405 aa31.28■■■□□ 2.6
GCFC2-207ENST00000470503 CDC42BPAQ5VT25 1732 aa31.27■■■□□ 2.6
GCFC2-207ENST00000470503 KIAA1107Q9UPP5 1409 aa31.27■■■□□ 2.6
GCFC2-207ENST00000470503 CERKQ8TCT0 537 aa31.27■■■□□ 2.6
GCFC2-207ENST00000470503 PLEKHH2Q8IVE3 1493 aa31.26■■■□□ 2.59
GCFC2-207ENST00000470503 CFDP1Q9UEE9 299 aaPredicted RBP31.25■■■□□ 2.59
GCFC2-207ENST00000470503 SPAG9O60271 1321 aaKnown RBP31.24■■■□□ 2.59
GCFC2-207ENST00000470503 KIDINS220Q9ULH0 1771 aa31.22■■■□□ 2.59
GCFC2-207ENST00000470503 CCNB3Q8WWL7 1395 aa31.22■■■□□ 2.59
GCFC2-207ENST00000470503 SAMD9LQ8IVG5 1584 aa31.21■■■□□ 2.59
GCFC2-207ENST00000470503 MTUS2Q5JR59 1369 aa31.2■■■□□ 2.59
GCFC2-207ENST00000470503 HNRNPMP52272 730 aaKnown RBP eCLIP31.2■■■□□ 2.59
GCFC2-207ENST00000470503 SYCP2Q9BX26 1530 aa31.17■■■□□ 2.58
GCFC2-207ENST00000470503 C3P01024 1663 aa31.13■■■□□ 2.57
GCFC2-207ENST00000470503 NPATQ14207 1427 aa31.11■■■□□ 2.57
GCFC2-207ENST00000470503 PTPRTO14522 1441 aa31.1■■■□□ 2.57
GCFC2-207ENST00000470503 PPP6R1Q9UPN7 881 aa31.1■■■□□ 2.57
GCFC2-207ENST00000470503 ATP7AQ04656 1500 aa31.08■■■□□ 2.57
GCFC2-207ENST00000470503 ZMYM3Q14202 1370 aa31.08■■■□□ 2.57
GCFC2-207ENST00000470503 A2MP01023 1474 aa31.06■■■□□ 2.56
GCFC2-207ENST00000470503 STRCQ7RTU9 1775 aa31.05■■■□□ 2.56
GCFC2-207ENST00000470503 CEP162Q5TB80 1403 aa31.04■■■□□ 2.56
GCFC2-207ENST00000470503 EHBP1L1Q8N3D4 1523 aa31.03■■■□□ 2.56
GCFC2-207ENST00000470503 INO80Q9ULG1 1556 aaPredicted RBP31.02■■■□□ 2.56
GCFC2-207ENST00000470503 MROH2AA6NES4 1674 aa31.02■■■□□ 2.56
GCFC2-207ENST00000470503 PLXNC1O60486 1568 aa31■■■□□ 2.55
GCFC2-207ENST00000470503 RTEL1-TNFRSF6BF6WH68 1400 aa30.99■■■□□ 2.55
GCFC2-207ENST00000470503 RSPH4AQ5TD94 716 aa30.98■■■□□ 2.55
GCFC2-207ENST00000470503 NCOA1Q15788 1441 aa30.98■■■□□ 2.55
GCFC2-207ENST00000470503 MBD5Q9P267 1494 aa30.97■■■□□ 2.55
GCFC2-207ENST00000470503 ZNF644Q9H582 1327 aaPredicted RBP30.97■■■□□ 2.55
GCFC2-207ENST00000470503 GGT6Q6P531 493 aa30.96■■■□□ 2.55
GCFC2-207ENST00000470503 TIAM1Q13009 1591 aa30.96■■■□□ 2.55
GCFC2-207ENST00000470503 SUPT6HQ7KZ85 1726 aaKnown RBP30.95■■■□□ 2.54
GCFC2-207ENST00000470503 DHX29Q7Z478 1369 aaKnown RBP30.91■■■□□ 2.54
GCFC2-207ENST00000470503 ADGBQ8N7X0 1667 aa30.89■■■□□ 2.54
GCFC2-207ENST00000470503 PTPRKQ15262 1439 aa30.89■■■□□ 2.53
GCFC2-207ENST00000470503 PKD2Q13563 968 aa30.88■■■□□ 2.53
GCFC2-207ENST00000470503 CAMSAP1Q5T5Y3 1602 aa30.85■■■□□ 2.53
GCFC2-207ENST00000470503 PLA2R1Q13018 1463 aa30.84■■■□□ 2.53
GCFC2-207ENST00000470503 NCOA2Q15596 1464 aa30.84■■■□□ 2.53
GCFC2-207ENST00000470503 IQSEC2Q5JU85 1478 aa30.84■■■□□ 2.53
GCFC2-207ENST00000470503 CLTCQ00610 1675 aaKnown RBP30.84■■■□□ 2.53
GCFC2-207ENST00000470503 CCDC141Q6ZP82 1450 aa30.82■■■□□ 2.53
GCFC2-207ENST00000470503 LTBP4Q8N2S1 1624 aa30.8■■■□□ 2.52
GCFC2-207ENST00000470503 FAM135AQ9P2D6 1515 aa30.78■■■□□ 2.52
GCFC2-207ENST00000470503 KIF3BO15066 747 aa30.78■■■□□ 2.52
GCFC2-207ENST00000470503 TSPY4P0CV99 314 aa30.78■■■□□ 2.52
GCFC2-207ENST00000470503 TSPY10P0CW01 314 aa30.78■■■□□ 2.52
GCFC2-207ENST00000470503 NCKAP5LQ9HCH0 1330 aa30.77■■■□□ 2.52
GCFC2-207ENST00000470503 CAMSAP2Q08AD1 1489 aa30.76■■■□□ 2.52
GCFC2-207ENST00000470503 CEP170BQ9Y4F5 1589 aaPredicted RBP30.76■■■□□ 2.52
GCFC2-207ENST00000470503 ZNF142P52746 1687 aaPredicted RBP30.76■■■□□ 2.51
GCFC2-207ENST00000470503 MYO3AQ8NEV4 1616 aa30.74■■■□□ 2.51
GCFC2-207ENST00000470503 TCOF1Q13428 1488 aaKnown RBP30.74■■■□□ 2.51
GCFC2-207ENST00000470503 VPS8Q8N3P4 1428 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms