RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 ABCC10Q5T3U5 1492 aa16.23■□□□□ 0.19
SND1-208ENST00000470463 ROCK1Q13464 1354 aa16.21■□□□□ 0.19
SND1-208ENST00000470463 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
SND1-208ENST00000470463 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
SND1-208ENST00000470463 ZCCHC11Q5TAX3 1644 aaKnown RBP16.19■□□□□ 0.18
SND1-208ENST00000470463 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
SND1-208ENST00000470463 DAPK1P53355 1430 aa16.18■□□□□ 0.18
SND1-208ENST00000470463 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
SND1-208ENST00000470463 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
SND1-208ENST00000470463 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
SND1-208ENST00000470463 NAIPQ13075 1403 aa16.15■□□□□ 0.18
SND1-208ENST00000470463 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
SND1-208ENST00000470463 PLEKHH2Q8IVE3 1493 aa16.15■□□□□ 0.18
SND1-208ENST00000470463 PREX2Q70Z35 1606 aa16.14■□□□□ 0.17
SND1-208ENST00000470463 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.17
SND1-208ENST00000470463 ABCC5O15440 1437 aa16.13■□□□□ 0.17
SND1-208ENST00000470463 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
SND1-208ENST00000470463 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
SND1-208ENST00000470463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
SND1-208ENST00000470463 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
SND1-208ENST00000470463 ARHGEF5Q12774 1597 aa16.11■□□□□ 0.17
SND1-208ENST00000470463 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
SND1-208ENST00000470463 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
SND1-208ENST00000470463 MYO5CQ9NQX4 1742 aa16.09■□□□□ 0.17
SND1-208ENST00000470463 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
SND1-208ENST00000470463 ZNF777Q9ULD5 760 aaPredicted RBP16.09■□□□□ 0.17
SND1-208ENST00000470463 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
SND1-208ENST00000470463 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
SND1-208ENST00000470463 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
SND1-208ENST00000470463 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
SND1-208ENST00000470463 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
SND1-208ENST00000470463 PLCH2O75038 1416 aa16.08■□□□□ 0.16
SND1-208ENST00000470463 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
SND1-208ENST00000470463 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.16
SND1-208ENST00000470463 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
SND1-208ENST00000470463 ARHGAP5Q13017 1502 aa16.07■□□□□ 0.16
SND1-208ENST00000470463 CDC42BPBQ9Y5S2 1711 aa16.06■□□□□ 0.16
SND1-208ENST00000470463 TTC37Q6PGP7 1564 aa16.06■□□□□ 0.16
SND1-208ENST00000470463 EFCAB2Q5VUJ9 269 aa16.06■□□□□ 0.16
SND1-208ENST00000470463 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
SND1-208ENST00000470463 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
SND1-208ENST00000470463 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
SND1-208ENST00000470463 NCOA1Q15788 1441 aa16.04■□□□□ 0.16
SND1-208ENST00000470463 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
SND1-208ENST00000470463 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
SND1-208ENST00000470463 ASXL2Q76L83 1435 aa16.02■□□□□ 0.16
SND1-208ENST00000470463 KDM6BO15054 1643 aa16.02■□□□□ 0.16
SND1-208ENST00000470463 SAMD9LQ8IVG5 1584 aa16.02■□□□□ 0.16
SND1-208ENST00000470463 MBD5Q9P267 1494 aa16.02■□□□□ 0.15
SND1-208ENST00000470463 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
SND1-208ENST00000470463 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
SND1-208ENST00000470463 DIP2BQ9P265 1576 aa16.01■□□□□ 0.15
SND1-208ENST00000470463 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
SND1-208ENST00000470463 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.15
SND1-208ENST00000470463 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
SND1-208ENST00000470463 SYCP2Q9BX26 1530 aa15.95■□□□□ 0.14
SND1-208ENST00000470463 TRIM52Q96A61 297 aa15.95■□□□□ 0.14
SND1-208ENST00000470463 ABCC1P33527 1531 aa15.94■□□□□ 0.14
SND1-208ENST00000470463 CFAP74Q9C0B2 1584 aa15.93■□□□□ 0.14
SND1-208ENST00000470463 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
SND1-208ENST00000470463 FANCAO15360 1455 aa15.92■□□□□ 0.14
SND1-208ENST00000470463 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
SND1-208ENST00000470463 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
SND1-208ENST00000470463 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
SND1-208ENST00000470463 CD109Q6YHK3 1445 aa15.87■□□□□ 0.13
SND1-208ENST00000470463 KDM5DQ9BY66 1539 aa15.87■□□□□ 0.13
SND1-208ENST00000470463 DUOX2Q9NRD8 1548 aa15.87■□□□□ 0.13
SND1-208ENST00000470463 ERBINQ96RT1 1412 aa15.86■□□□□ 0.13
SND1-208ENST00000470463 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
SND1-208ENST00000470463 ADGRL1O94910 1474 aa15.85■□□□□ 0.13
SND1-208ENST00000470463 ARHGEF12Q9NZN5 1544 aa15.85■□□□□ 0.13
SND1-208ENST00000470463 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
SND1-208ENST00000470463 GLI2P10070 1586 aa15.84■□□□□ 0.13
SND1-208ENST00000470463 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
SND1-208ENST00000470463 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
SND1-208ENST00000470463 TEX14Q8IWB6 1497 aa15.84■□□□□ 0.13
SND1-208ENST00000470463 NEO1Q92859 1461 aa15.84■□□□□ 0.13
SND1-208ENST00000470463 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
SND1-208ENST00000470463 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
SND1-208ENST00000470463 SCAPERQ9BY12 1400 aa15.82■□□□□ 0.12
SND1-208ENST00000470463 TRAPPC8Q9Y2L5 1435 aa15.82■□□□□ 0.12
SND1-208ENST00000470463 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
SND1-208ENST00000470463 NUP155O75694 1391 aa15.81■□□□□ 0.12
SND1-208ENST00000470463 PZPP20742 1482 aa15.81■□□□□ 0.12
SND1-208ENST00000470463 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
SND1-208ENST00000470463 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
SND1-208ENST00000470463 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
SND1-208ENST00000470463 UNC13BO14795 1591 aa15.79■□□□□ 0.12
SND1-208ENST00000470463 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
SND1-208ENST00000470463 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
SND1-208ENST00000470463 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
SND1-208ENST00000470463 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.12
SND1-208ENST00000470463 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.11
SND1-208ENST00000470463 MAP3K4Q9Y6R4 1608 aa15.76■□□□□ 0.11
SND1-208ENST00000470463 RPRD2Q5VT52 1461 aaKnown RBP15.76■□□□□ 0.11
SND1-208ENST00000470463 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
SND1-208ENST00000470463 MAGI2Q86UL8 1455 aa15.74■□□□□ 0.11
SND1-208ENST00000470463 PKD2Q13563 968 aa15.74■□□□□ 0.11
SND1-208ENST00000470463 POGZQ7Z3K3 1410 aa15.74■□□□□ 0.11
SND1-208ENST00000470463 KDM5CP41229 1560 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms