RNA–Protein interactions for RNA: ENST00000470455.5

ATP6V1A-204, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

TSL 2

Gene ATP6V1A, Length 2,266 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-204ENST00000470455 CAMSAP2Q08AD1 1489 aa12.52□□□□□ -0.41
ATP6V1A-204ENST00000470455 PLCH2O75038 1416 aa12.52□□□□□ -0.41
ATP6V1A-204ENST00000470455 HNRNPMP52272 730 aaKnown RBP eCLIP12.51□□□□□ -0.41
ATP6V1A-204ENST00000470455 EFCAB2Q5VUJ9 269 aa12.51□□□□□ -0.41
ATP6V1A-204ENST00000470455 ARHGAP5Q13017 1502 aa12.51□□□□□ -0.41
ATP6V1A-204ENST00000470455 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
ATP6V1A-204ENST00000470455 PREX2Q70Z35 1606 aa12.5□□□□□ -0.41
ATP6V1A-204ENST00000470455 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
ATP6V1A-204ENST00000470455 ABCC5O15440 1437 aa12.49□□□□□ -0.41
ATP6V1A-204ENST00000470455 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
ATP6V1A-204ENST00000470455 DAPK1P53355 1430 aa12.48□□□□□ -0.41
ATP6V1A-204ENST00000470455 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
ATP6V1A-204ENST00000470455 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
ATP6V1A-204ENST00000470455 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
ATP6V1A-204ENST00000470455 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.41
ATP6V1A-204ENST00000470455 SAMD9LQ8IVG5 1584 aa12.46□□□□□ -0.41
ATP6V1A-204ENST00000470455 SETD5Q9C0A6 1442 aa12.46□□□□□ -0.42
ATP6V1A-204ENST00000470455 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
ATP6V1A-204ENST00000470455 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
ATP6V1A-204ENST00000470455 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
ATP6V1A-204ENST00000470455 MBD5Q9P267 1494 aa12.44□□□□□ -0.42
ATP6V1A-204ENST00000470455 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
ATP6V1A-204ENST00000470455 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
ATP6V1A-204ENST00000470455 FANCAO15360 1455 aa12.43□□□□□ -0.42
ATP6V1A-204ENST00000470455 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
ATP6V1A-204ENST00000470455 ARAP3Q8WWN8 1544 aa12.43□□□□□ -0.42
ATP6V1A-204ENST00000470455 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
ATP6V1A-204ENST00000470455 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
ATP6V1A-204ENST00000470455 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
ATP6V1A-204ENST00000470455 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
ATP6V1A-204ENST00000470455 KIAA1107Q9UPP5 1409 aa12.42□□□□□ -0.42
ATP6V1A-204ENST00000470455 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
ATP6V1A-204ENST00000470455 NAIPQ13075 1403 aa12.41□□□□□ -0.42
ATP6V1A-204ENST00000470455 ROCK1Q13464 1354 aa12.4□□□□□ -0.42
ATP6V1A-204ENST00000470455 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
ATP6V1A-204ENST00000470455 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.42
ATP6V1A-204ENST00000470455 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
ATP6V1A-204ENST00000470455 GLI2P10070 1586 aa12.39□□□□□ -0.43
ATP6V1A-204ENST00000470455 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
ATP6V1A-204ENST00000470455 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
ATP6V1A-204ENST00000470455 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
ATP6V1A-204ENST00000470455 SCAPERQ9BY12 1400 aa12.39□□□□□ -0.43
ATP6V1A-204ENST00000470455 ABCC1P33527 1531 aa12.38□□□□□ -0.43
ATP6V1A-204ENST00000470455 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
ATP6V1A-204ENST00000470455 HRCP23327 699 aa12.38□□□□□ -0.43
ATP6V1A-204ENST00000470455 ANKRD30AQ9BXX3 1397 aa12.38□□□□□ -0.43
ATP6V1A-204ENST00000470455 ADGRL1O94910 1474 aa12.38□□□□□ -0.43
ATP6V1A-204ENST00000470455 MAP3K4Q9Y6R4 1608 aa12.37□□□□□ -0.43
ATP6V1A-204ENST00000470455 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
ATP6V1A-204ENST00000470455 SHANK2Q9UPX8 1470 aa12.36□□□□□ -0.43
ATP6V1A-204ENST00000470455 CROCC2H7BZ55 1655 aa12.36□□□□□ -0.43
ATP6V1A-204ENST00000470455 ADGRL2O95490 1459 aa12.36□□□□□ -0.43
ATP6V1A-204ENST00000470455 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
ATP6V1A-204ENST00000470455 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
ATP6V1A-204ENST00000470455 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
ATP6V1A-204ENST00000470455 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
ATP6V1A-204ENST00000470455 KDM6BO15054 1643 aa12.33□□□□□ -0.43
ATP6V1A-204ENST00000470455 NEO1Q92859 1461 aa12.33□□□□□ -0.43
ATP6V1A-204ENST00000470455 KIF15Q9NS87 1388 aa12.33□□□□□ -0.44
ATP6V1A-204ENST00000470455 ADGBQ8N7X0 1667 aa12.33□□□□□ -0.44
ATP6V1A-204ENST00000470455 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
ATP6V1A-204ENST00000470455 CFAP74Q9C0B2 1584 aa12.32□□□□□ -0.44
ATP6V1A-204ENST00000470455 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
ATP6V1A-204ENST00000470455 TSPOAP1O95153 1857 aa12.32□□□□□ -0.44
ATP6V1A-204ENST00000470455 MAST1Q9Y2H9 1570 aa12.31□□□□□ -0.44
ATP6V1A-204ENST00000470455 KIF13AQ9H1H9 1805 aa12.31□□□□□ -0.44
ATP6V1A-204ENST00000470455 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
ATP6V1A-204ENST00000470455 RTEL1-TNFRSF6BF6WH68 1400 aa12.29□□□□□ -0.44
ATP6V1A-204ENST00000470455 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
ATP6V1A-204ENST00000470455 POGZQ7Z3K3 1410 aa12.29□□□□□ -0.44
ATP6V1A-204ENST00000470455 ZNF518AQ6AHZ1 1483 aa12.29□□□□□ -0.44
ATP6V1A-204ENST00000470455 PPRC1Q5VV67 1664 aaKnown RBP12.28□□□□□ -0.44
ATP6V1A-204ENST00000470455 TEX14Q8IWB6 1497 aa12.28□□□□□ -0.44
ATP6V1A-204ENST00000470455 ZEB1P37275 1124 aaPredicted RBP12.28□□□□□ -0.44
ATP6V1A-204ENST00000470455 ZFYVE16Q7Z3T8 1539 aa12.26□□□□□ -0.45
ATP6V1A-204ENST00000470455 ATP7AQ04656 1500 aa12.26□□□□□ -0.45
ATP6V1A-204ENST00000470455 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
ATP6V1A-204ENST00000470455 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
ATP6V1A-204ENST00000470455 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
ATP6V1A-204ENST00000470455 DUOX2Q9NRD8 1548 aa12.24□□□□□ -0.45
ATP6V1A-204ENST00000470455 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
ATP6V1A-204ENST00000470455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.45
ATP6V1A-204ENST00000470455 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
ATP6V1A-204ENST00000470455 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
ATP6V1A-204ENST00000470455 KDM5CP41229 1560 aa12.23□□□□□ -0.45
ATP6V1A-204ENST00000470455 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
ATP6V1A-204ENST00000470455 NUP155O75694 1391 aa12.23□□□□□ -0.45
ATP6V1A-204ENST00000470455 KIDINS220Q9ULH0 1771 aa12.22□□□□□ -0.45
ATP6V1A-204ENST00000470455 DHX29Q7Z478 1369 aaKnown RBP12.22□□□□□ -0.45
ATP6V1A-204ENST00000470455 FOXD1Q16676 465 aa12.22□□□□□ -0.45
ATP6V1A-204ENST00000470455 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
ATP6V1A-204ENST00000470455 ERBINQ96RT1 1412 aa12.21□□□□□ -0.45
ATP6V1A-204ENST00000470455 RICTORQ6R327 1708 aa12.21□□□□□ -0.46
ATP6V1A-204ENST00000470455 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.46
ATP6V1A-204ENST00000470455 KIF3BO15066 747 aa12.2□□□□□ -0.46
ATP6V1A-204ENST00000470455 HECW2Q9P2P5 1572 aa12.2□□□□□ -0.46
ATP6V1A-204ENST00000470455 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
ATP6V1A-204ENST00000470455 FRMPD1Q5SYB0 1578 aa12.2□□□□□ -0.46
ATP6V1A-204ENST00000470455 PZPP20742 1482 aa12.19□□□□□ -0.46
ATP6V1A-204ENST00000470455 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms