RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
VAMP3-202ENST00000470357 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
VAMP3-202ENST00000470357 KIF27Q86VH2 1401 aa10.82□□□□□ -0.68
VAMP3-202ENST00000470357 KDM4FA0A1W2PPD8 638 aa10.81□□□□□ -0.68
VAMP3-202ENST00000470357 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
VAMP3-202ENST00000470357 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
VAMP3-202ENST00000470357 ADAMTS12P58397 1594 aa10.81□□□□□ -0.68
VAMP3-202ENST00000470357 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
VAMP3-202ENST00000470357 ABCC10Q5T3U5 1492 aa10.79□□□□□ -0.68
VAMP3-202ENST00000470357 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
VAMP3-202ENST00000470357 PKD2Q13563 968 aa10.78□□□□□ -0.68
VAMP3-202ENST00000470357 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.68
VAMP3-202ENST00000470357 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
VAMP3-202ENST00000470357 JPH4Q96JJ6 628 aa10.77□□□□□ -0.69
VAMP3-202ENST00000470357 SGIP1Q9BQI5 828 aa10.77□□□□□ -0.69
VAMP3-202ENST00000470357 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
VAMP3-202ENST00000470357 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
VAMP3-202ENST00000470357 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
VAMP3-202ENST00000470357 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
VAMP3-202ENST00000470357 KIF21BO75037 1637 aa10.74□□□□□ -0.69
VAMP3-202ENST00000470357 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
VAMP3-202ENST00000470357 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
VAMP3-202ENST00000470357 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
VAMP3-202ENST00000470357 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
VAMP3-202ENST00000470357 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
VAMP3-202ENST00000470357 CUL7Q14999 1698 aa10.73□□□□□ -0.69
VAMP3-202ENST00000470357 DIP2BQ9P265 1576 aa10.72□□□□□ -0.69
VAMP3-202ENST00000470357 POTEIP0CG38 1075 aa10.7□□□□□ -0.7
VAMP3-202ENST00000470357 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
VAMP3-202ENST00000470357 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
VAMP3-202ENST00000470357 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
VAMP3-202ENST00000470357 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
VAMP3-202ENST00000470357 IGF1RP08069 1367 aa10.67□□□□□ -0.7
VAMP3-202ENST00000470357 KDM6BO15054 1643 aa10.67□□□□□ -0.7
VAMP3-202ENST00000470357 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
VAMP3-202ENST00000470357 RGL2O15211 777 aa10.65□□□□□ -0.7
VAMP3-202ENST00000470357 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
VAMP3-202ENST00000470357 CARMIL1Q5VZK9 1371 aa10.65□□□□□ -0.71
VAMP3-202ENST00000470357 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
VAMP3-202ENST00000470357 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
VAMP3-202ENST00000470357 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
VAMP3-202ENST00000470357 TIE1P35590 1138 aa10.64□□□□□ -0.71
VAMP3-202ENST00000470357 PSEN1P49768 467 aa10.63□□□□□ -0.71
VAMP3-202ENST00000470357 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
VAMP3-202ENST00000470357 TMEM106CQ9BVX2 250 aa10.63□□□□□ -0.71
VAMP3-202ENST00000470357 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
VAMP3-202ENST00000470357 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
VAMP3-202ENST00000470357 TTLL13PA6NNM8 815 aa10.62□□□□□ -0.71
VAMP3-202ENST00000470357 ATN1P54259 1190 aaPredicted RBP10.62□□□□□ -0.71
VAMP3-202ENST00000470357 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
VAMP3-202ENST00000470357 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
VAMP3-202ENST00000470357 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
VAMP3-202ENST00000470357 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
VAMP3-202ENST00000470357 KIAA0586Q9BVV6 1533 aa10.61□□□□□ -0.71
VAMP3-202ENST00000470357 TSPOAP1O95153 1857 aa10.6□□□□□ -0.71
VAMP3-202ENST00000470357 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
VAMP3-202ENST00000470357 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
VAMP3-202ENST00000470357 CTTNBP2Q8WZ74 1663 aa10.58□□□□□ -0.72
VAMP3-202ENST00000470357 PPRC1Q5VV67 1664 aaKnown RBP10.57□□□□□ -0.72
VAMP3-202ENST00000470357 ADGRL1O94910 1474 aa10.57□□□□□ -0.72
VAMP3-202ENST00000470357 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
VAMP3-202ENST00000470357 PTPRGP23470 1445 aa10.57□□□□□ -0.72
VAMP3-202ENST00000470357 GLI2P10070 1586 aa10.56□□□□□ -0.72
VAMP3-202ENST00000470357 ABCC2Q92887 1545 aa10.55□□□□□ -0.72
VAMP3-202ENST00000470357 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.55□□□□□ -0.72
VAMP3-202ENST00000470357 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
VAMP3-202ENST00000470357 TRIM35Q9UPQ4 493 aa10.55□□□□□ -0.72
VAMP3-202ENST00000470357 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
VAMP3-202ENST00000470357 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
VAMP3-202ENST00000470357 PLB1Q6P1J6 1458 aa10.53□□□□□ -0.72
VAMP3-202ENST00000470357 CEP162Q5TB80 1403 aa10.52□□□□□ -0.73
VAMP3-202ENST00000470357 HECW2Q9P2P5 1572 aa10.52□□□□□ -0.73
VAMP3-202ENST00000470357 UHRF1BP1LA0JNW5 1464 aa10.5□□□□□ -0.73
VAMP3-202ENST00000470357 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
VAMP3-202ENST00000470357 SLC39A7Q92504 469 aa10.49□□□□□ -0.73
VAMP3-202ENST00000470357 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
VAMP3-202ENST00000470357 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
VAMP3-202ENST00000470357 CLIP1P30622 1438 aa10.49□□□□□ -0.73
VAMP3-202ENST00000470357 C7P10643 843 aa10.48□□□□□ -0.73
VAMP3-202ENST00000470357 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
VAMP3-202ENST00000470357 UACAQ9BZF9 1416 aa10.48□□□□□ -0.73
VAMP3-202ENST00000470357 EFCAB5A4FU69 1503 aa10.48□□□□□ -0.73
VAMP3-202ENST00000470357 IQGAP2Q13576 1575 aa10.48□□□□□ -0.73
VAMP3-202ENST00000470357 STK25O00506 426 aa10.47□□□□□ -0.73
VAMP3-202ENST00000470357 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
VAMP3-202ENST00000470357 METRNQ9UJH8 293 aa10.47□□□□□ -0.73
VAMP3-202ENST00000470357 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
VAMP3-202ENST00000470357 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
VAMP3-202ENST00000470357 KDM5BQ9UGL1 1544 aa10.47□□□□□ -0.73
VAMP3-202ENST00000470357 MAP3K4Q9Y6R4 1608 aa10.47□□□□□ -0.73
VAMP3-202ENST00000470357 DISP1Q96F81 1524 aa10.46□□□□□ -0.74
VAMP3-202ENST00000470357 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
VAMP3-202ENST00000470357 TEX14Q8IWB6 1497 aa10.43□□□□□ -0.74
VAMP3-202ENST00000470357 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
VAMP3-202ENST00000470357 IER5LQ5T953 404 aa10.43□□□□□ -0.74
VAMP3-202ENST00000470357 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
VAMP3-202ENST00000470357 SEC24BO95487 1268 aa10.42□□□□□ -0.74
VAMP3-202ENST00000470357 COLQQ9Y215 455 aaPredicted RBP10.42□□□□□ -0.74
VAMP3-202ENST00000470357 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
VAMP3-202ENST00000470357 SAMD9Q5K651 1589 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms