RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
SRRM1-208ENST00000470243 POTEB3A0JP26 581 aa9.76□□□□□ -0.85
SRRM1-208ENST00000470243 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
SRRM1-208ENST00000470243 POTEBQ6S5H4 581 aa9.76□□□□□ -0.85
SRRM1-208ENST00000470243 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
SRRM1-208ENST00000470243 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
SRRM1-208ENST00000470243 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
SRRM1-208ENST00000470243 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
SRRM1-208ENST00000470243 CABP2Q9NPB3 220 aa9.71□□□□□ -0.86
SRRM1-208ENST00000470243 PDAP1Q13442 181 aaKnown RBP9.7□□□□□ -0.86
SRRM1-208ENST00000470243 ILDR1Q86SU0 546 aaPredicted RBP9.67□□□□□ -0.86
SRRM1-208ENST00000470243 G3V3G9 751 aa9.66□□□□□ -0.86
SRRM1-208ENST00000470243 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
SRRM1-208ENST00000470243 BCANQ96GW7 911 aa9.65□□□□□ -0.86
SRRM1-208ENST00000470243 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
SRRM1-208ENST00000470243 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
SRRM1-208ENST00000470243 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
SRRM1-208ENST00000470243 HOXB1P14653 301 aaPredicted RBP9.57□□□□□ -0.88
SRRM1-208ENST00000470243 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
SRRM1-208ENST00000470243 ERBB3P21860 1342 aa9.56□□□□□ -0.88
SRRM1-208ENST00000470243 MFRPQ9BY79 579 aa9.56□□□□□ -0.88
SRRM1-208ENST00000470243 DOK7Q18PE1 504 aa9.54□□□□□ -0.88
SRRM1-208ENST00000470243 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
SRRM1-208ENST00000470243 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
SRRM1-208ENST00000470243 TMEM92Q6UXU6 159 aa9.49□□□□□ -0.89
SRRM1-208ENST00000470243 PHF8Q9UPP1 1060 aa9.49□□□□□ -0.89
SRRM1-208ENST00000470243 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
SRRM1-208ENST00000470243 FBXO22Q8NEZ5 403 aa9.48□□□□□ -0.89
SRRM1-208ENST00000470243 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
SRRM1-208ENST00000470243 RNF166Q96A37 237 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-208ENST00000470243 PPP1R37O75864 691 aa9.46□□□□□ -0.9
SRRM1-208ENST00000470243 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
SRRM1-208ENST00000470243 NLRP6P59044 892 aa9.45□□□□□ -0.9
SRRM1-208ENST00000470243 SOX12O15370 315 aa9.44□□□□□ -0.9
SRRM1-208ENST00000470243 NBR1Q14596 966 aa9.44□□□□□ -0.9
SRRM1-208ENST00000470243 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
SRRM1-208ENST00000470243 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
SRRM1-208ENST00000470243 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
SRRM1-208ENST00000470243 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
SRRM1-208ENST00000470243 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
SRRM1-208ENST00000470243 ARSIQ5FYB1 569 aa9.38□□□□□ -0.91
SRRM1-208ENST00000470243 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
SRRM1-208ENST00000470243 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.91
SRRM1-208ENST00000470243 WDR70Q9NW82 654 aa9.36□□□□□ -0.91
SRRM1-208ENST00000470243 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
SRRM1-208ENST00000470243 KCNV2Q8TDN2 545 aa9.35□□□□□ -0.91
SRRM1-208ENST00000470243 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
SRRM1-208ENST00000470243 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
SRRM1-208ENST00000470243 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
SRRM1-208ENST00000470243 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
SRRM1-208ENST00000470243 PTGER2P43116 358 aa9.25□□□□□ -0.93
SRRM1-208ENST00000470243 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
SRRM1-208ENST00000470243 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
SRRM1-208ENST00000470243 NUDT7P0C024 238 aa9.23□□□□□ -0.93
SRRM1-208ENST00000470243 E2F4Q16254 413 aa9.23□□□□□ -0.93
SRRM1-208ENST00000470243 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
SRRM1-208ENST00000470243 C2orf72A6NCS6 295 aa9.22□□□□□ -0.93
SRRM1-208ENST00000470243 MFSD10Q14728 455 aa9.22□□□□□ -0.93
SRRM1-208ENST00000470243 PDE4AP27815 886 aa9.21□□□□□ -0.94
SRRM1-208ENST00000470243 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
SRRM1-208ENST00000470243 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
SRRM1-208ENST00000470243 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
SRRM1-208ENST00000470243 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
SRRM1-208ENST00000470243 KIF3CO14782 793 aa9.18□□□□□ -0.94
SRRM1-208ENST00000470243 PCDHGA4Q9Y5G9 962 aa9.16□□□□□ -0.94
SRRM1-208ENST00000470243 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
SRRM1-208ENST00000470243 SEMA3EO15041 775 aa9.13□□□□□ -0.95
SRRM1-208ENST00000470243 PBX2P40425 430 aa9.13□□□□□ -0.95
SRRM1-208ENST00000470243 LMOD2Q6P5Q4 547 aa9.13□□□□□ -0.95
SRRM1-208ENST00000470243 GPHNQ9NQX3 736 aaPredicted RBP9.13□□□□□ -0.95
SRRM1-208ENST00000470243 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
SRRM1-208ENST00000470243 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
SRRM1-208ENST00000470243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
SRRM1-208ENST00000470243 TMC2Q8TDI7 906 aa9.11□□□□□ -0.95
SRRM1-208ENST00000470243 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
SRRM1-208ENST00000470243 DSG2Q14126 1118 aa9.1□□□□□ -0.95
SRRM1-208ENST00000470243 SLC34A2O95436 690 aa9.09□□□□□ -0.95
SRRM1-208ENST00000470243 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
SRRM1-208ENST00000470243 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
SRRM1-208ENST00000470243 ARIH1Q9Y4X5 557 aaPredicted RBP9.08□□□□□ -0.96
SRRM1-208ENST00000470243 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-208ENST00000470243 ARHGAP33O14559 1287 aa9.06□□□□□ -0.96
SRRM1-208ENST00000470243 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
SRRM1-208ENST00000470243 FOXK1P85037 733 aa9.05□□□□□ -0.96
SRRM1-208ENST00000470243 DPYSL4O14531 572 aa9.04□□□□□ -0.96
SRRM1-208ENST00000470243 PSEN2P49810 448 aa9.04□□□□□ -0.96
SRRM1-208ENST00000470243 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
SRRM1-208ENST00000470243 PLPP6Q8IY26 295 aa9.03□□□□□ -0.96
SRRM1-208ENST00000470243 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
SRRM1-208ENST00000470243 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
SRRM1-208ENST00000470243 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
SRRM1-208ENST00000470243 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
SRRM1-208ENST00000470243 PSDA5PKW4 1024 aaPredicted RBP8.98□□□□□ -0.97
SRRM1-208ENST00000470243 HRO43593 1189 aa8.98□□□□□ -0.97
SRRM1-208ENST00000470243 PDIA6Q15084 440 aa8.98□□□□□ -0.97
SRRM1-208ENST00000470243 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
SRRM1-208ENST00000470243 SMYD5Q6GMV2 418 aa8.97□□□□□ -0.97
SRRM1-208ENST00000470243 TK2O00142 265 aa8.96□□□□□ -0.98
SRRM1-208ENST00000470243 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
SRRM1-208ENST00000470243 STAC3Q96MF2 364 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms