RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 NUP155O75694 1391 aa20.28■□□□□ 0.84
BRAT1-204ENST00000469750 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
BRAT1-204ENST00000469750 STK26Q9P289 416 aa20.27■□□□□ 0.84
BRAT1-204ENST00000469750 NPHP1O15259 732 aa20.27■□□□□ 0.84
BRAT1-204ENST00000469750 HDGFL2Q7Z4V5 671 aaPredicted RBP20.26■□□□□ 0.83
BRAT1-204ENST00000469750 KTN1Q86UP2 1357 aaKnown RBP20.26■□□□□ 0.83
BRAT1-204ENST00000469750 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
BRAT1-204ENST00000469750 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
BRAT1-204ENST00000469750 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
BRAT1-204ENST00000469750 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
BRAT1-204ENST00000469750 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
BRAT1-204ENST00000469750 PTMAP06454 111 aaKnown RBP20.2■□□□□ 0.83
BRAT1-204ENST00000469750 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
BRAT1-204ENST00000469750 KCNJ4P48050 445 aa20.2■□□□□ 0.82
BRAT1-204ENST00000469750 FGD1P98174 961 aa20.19■□□□□ 0.82
BRAT1-204ENST00000469750 TPRNQ4KMQ1 711 aa20.19■□□□□ 0.82
BRAT1-204ENST00000469750 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
BRAT1-204ENST00000469750 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
BRAT1-204ENST00000469750 ERICH6BQ5W0A0 696 aa20.17■□□□□ 0.82
BRAT1-204ENST00000469750 KIF3BO15066 747 aa20.16■□□□□ 0.82
BRAT1-204ENST00000469750 RALBP1Q15311 655 aa20.15■□□□□ 0.82
BRAT1-204ENST00000469750 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
BRAT1-204ENST00000469750 GOLGA2Q08379 1002 aa20.14■□□□□ 0.82
BRAT1-204ENST00000469750 RSPH4AQ5TD94 716 aa20.14■□□□□ 0.82
BRAT1-204ENST00000469750 WIZO95785 1651 aa20.14■□□□□ 0.81
BRAT1-204ENST00000469750 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
BRAT1-204ENST00000469750 HNRNPMP52272 730 aaKnown RBP eCLIP20.13■□□□□ 0.81
BRAT1-204ENST00000469750 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
BRAT1-204ENST00000469750 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
BRAT1-204ENST00000469750 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
BRAT1-204ENST00000469750 IPO8O15397 1037 aaKnown RBP20.12■□□□□ 0.81
BRAT1-204ENST00000469750 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
BRAT1-204ENST00000469750 CALD1Q05682 793 aaKnown RBP20.11■□□□□ 0.81
BRAT1-204ENST00000469750 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
BRAT1-204ENST00000469750 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
BRAT1-204ENST00000469750 TAOK2Q9UL54 1235 aa20.09■□□□□ 0.81
BRAT1-204ENST00000469750 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
BRAT1-204ENST00000469750 HSCBQ8IWL3 235 aa20.09■□□□□ 0.81
BRAT1-204ENST00000469750 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
BRAT1-204ENST00000469750 JPH4Q96JJ6 628 aa20.08■□□□□ 0.8
BRAT1-204ENST00000469750 MCCP23508 829 aa20.07■□□□□ 0.8
BRAT1-204ENST00000469750 L3MBTL2Q969R5 705 aa20.07■□□□□ 0.8
BRAT1-204ENST00000469750 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
BRAT1-204ENST00000469750 DNTTIP2Q5QJE6 756 aaKnown RBP20.05■□□□□ 0.8
BRAT1-204ENST00000469750 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
BRAT1-204ENST00000469750 TERF2IPQ9NYB0 399 aa20.04■□□□□ 0.8
BRAT1-204ENST00000469750 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
BRAT1-204ENST00000469750 WASHC2CQ9Y4E1 1318 aa20.04■□□□□ 0.8
BRAT1-204ENST00000469750 CSB-PGBD3P0DP91 1061 aa20.03■□□□□ 0.8
BRAT1-204ENST00000469750 PLCB2Q00722 1185 aa20.03■□□□□ 0.8
BRAT1-204ENST00000469750 NAP1L5Q96NT1 182 aaPredicted RBP20.02■□□□□ 0.8
BRAT1-204ENST00000469750 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
BRAT1-204ENST00000469750 EID1Q9Y6B2 187 aa20■□□□□ 0.79
BRAT1-204ENST00000469750 TULP1O00294 542 aaPredicted RBP20■□□□□ 0.79
BRAT1-204ENST00000469750 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
BRAT1-204ENST00000469750 APBB1O00213 710 aa19.98■□□□□ 0.79
BRAT1-204ENST00000469750 ITPRIPQ8IWB1 547 aa19.98■□□□□ 0.79
BRAT1-204ENST00000469750 RWDD1Q9H446 243 aaPredicted RBP19.98■□□□□ 0.79
BRAT1-204ENST00000469750 GOLGA6L6A8MZA4 724 aa19.98■□□□□ 0.79
BRAT1-204ENST00000469750 NLRP13Q86W25 1043 aa19.96■□□□□ 0.79
BRAT1-204ENST00000469750 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
BRAT1-204ENST00000469750 STK31Q9BXU1 1019 aa19.95■□□□□ 0.78
BRAT1-204ENST00000469750 KIAA1211Q6ZU35 1233 aa19.94■□□□□ 0.78
BRAT1-204ENST00000469750 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
BRAT1-204ENST00000469750 NRDCO43847 1150 aa19.93■□□□□ 0.78
BRAT1-204ENST00000469750 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
BRAT1-204ENST00000469750 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
BRAT1-204ENST00000469750 DEKP35659 375 aaKnown RBP19.92■□□□□ 0.78
BRAT1-204ENST00000469750 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
BRAT1-204ENST00000469750 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
BRAT1-204ENST00000469750 CCDC144AA2RUR9 1427 aa19.9■□□□□ 0.78
BRAT1-204ENST00000469750 SPRYD3Q8NCJ5 442 aa19.89■□□□□ 0.78
BRAT1-204ENST00000469750 TRAK1Q9UPV9 953 aa19.89■□□□□ 0.77
BRAT1-204ENST00000469750 PTPRGP23470 1445 aa19.89■□□□□ 0.77
BRAT1-204ENST00000469750 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
BRAT1-204ENST00000469750 LMOD3Q0VAK6 560 aa19.88■□□□□ 0.77
BRAT1-204ENST00000469750 PHLDB1Q86UU1 1377 aa19.87■□□□□ 0.77
BRAT1-204ENST00000469750 PDE3BQ13370 1112 aa19.87■□□□□ 0.77
BRAT1-204ENST00000469750 TCERG1O14776 1098 aaKnown RBP19.87■□□□□ 0.77
BRAT1-204ENST00000469750 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
BRAT1-204ENST00000469750 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
BRAT1-204ENST00000469750 AMPHP49418 695 aa19.86■□□□□ 0.77
BRAT1-204ENST00000469750 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
BRAT1-204ENST00000469750 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
BRAT1-204ENST00000469750 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
BRAT1-204ENST00000469750 ST20-MTHFSA0A0A6YYL1 179 aa19.84■□□□□ 0.77
BRAT1-204ENST00000469750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
BRAT1-204ENST00000469750 HMMRO75330 724 aa19.84■□□□□ 0.77
BRAT1-204ENST00000469750 CENPJQ9HC77 1338 aaPredicted RBP19.83■□□□□ 0.77
BRAT1-204ENST00000469750 ISY1Q9ULR0 285 aaKnown RBP19.83■□□□□ 0.77
BRAT1-204ENST00000469750 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
BRAT1-204ENST00000469750 GNL2Q13823 731 aaKnown RBP19.82■□□□□ 0.76
BRAT1-204ENST00000469750 L1TD1Q5T7N2 865 aaKnown RBP19.81■□□□□ 0.76
BRAT1-204ENST00000469750 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
BRAT1-204ENST00000469750 NUTM2FA1L443 756 aa19.81■□□□□ 0.76
BRAT1-204ENST00000469750 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
BRAT1-204ENST00000469750 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
BRAT1-204ENST00000469750 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
BRAT1-204ENST00000469750 CCDC9Q9Y3X0 531 aaKnown RBP19.8■□□□□ 0.76
BRAT1-204ENST00000469750 GORABQ5T7V8 394 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms