RNA–Protein interactions for RNA: ENST00000469625.2

CHD1L-206, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 423 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-206ENST00000469625 CD109Q6YHK3 1445 aa9.73□□□□□ -0.85
CHD1L-206ENST00000469625 MAGI3Q5TCQ9 1506 aa9.72□□□□□ -0.85
CHD1L-206ENST00000469625 ABCA9Q8IUA7 1624 aa9.71□□□□□ -0.86
CHD1L-206ENST00000469625 CAPN15O75808 1086 aa9.7□□□□□ -0.86
CHD1L-206ENST00000469625 CLIP1P30622 1438 aa9.7□□□□□ -0.86
CHD1L-206ENST00000469625 CDK13Q14004 1512 aaKnown RBP9.7□□□□□ -0.86
CHD1L-206ENST00000469625 PLEKHD1A6NEE1 506 aa9.69□□□□□ -0.86
CHD1L-206ENST00000469625 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
CHD1L-206ENST00000469625 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
CHD1L-206ENST00000469625 CASKIN1Q8WXD9 1431 aa9.67□□□□□ -0.86
CHD1L-206ENST00000469625 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
CHD1L-206ENST00000469625 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
CHD1L-206ENST00000469625 CCDC18Q5T9S5 1454 aa9.66□□□□□ -0.86
CHD1L-206ENST00000469625 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
CHD1L-206ENST00000469625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHD1L-206ENST00000469625 COL17A1Q9UMD9 1497 aaPredicted RBP9.65□□□□□ -0.87
CHD1L-206ENST00000469625 CEP162Q5TB80 1403 aa9.65□□□□□ -0.87
CHD1L-206ENST00000469625 PHLDB1Q86UU1 1377 aa9.64□□□□□ -0.87
CHD1L-206ENST00000469625 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
CHD1L-206ENST00000469625 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
CHD1L-206ENST00000469625 NEO1Q92859 1461 aa9.64□□□□□ -0.87
CHD1L-206ENST00000469625 KIF14Q15058 1648 aa9.64□□□□□ -0.87
CHD1L-206ENST00000469625 ARAP3Q8WWN8 1544 aa9.63□□□□□ -0.87
CHD1L-206ENST00000469625 TROQ12816 1431 aaPredicted RBP9.63□□□□□ -0.87
CHD1L-206ENST00000469625 CFAP74Q9C0B2 1584 aa9.63□□□□□ -0.87
CHD1L-206ENST00000469625 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
CHD1L-206ENST00000469625 FANCAO15360 1455 aa9.61□□□□□ -0.87
CHD1L-206ENST00000469625 PLCH2O75038 1416 aa9.59□□□□□ -0.87
CHD1L-206ENST00000469625 MYO5CQ9NQX4 1742 aa9.58□□□□□ -0.88
CHD1L-206ENST00000469625 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
CHD1L-206ENST00000469625 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
CHD1L-206ENST00000469625 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
CHD1L-206ENST00000469625 DENND4BO75064 1496 aaPredicted RBP9.57□□□□□ -0.88
CHD1L-206ENST00000469625 FRMPD1Q5SYB0 1578 aa9.57□□□□□ -0.88
CHD1L-206ENST00000469625 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
CHD1L-206ENST00000469625 ADGRL1O94910 1474 aa9.56□□□□□ -0.88
CHD1L-206ENST00000469625 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
CHD1L-206ENST00000469625 RAPGEF3O95398 923 aa9.55□□□□□ -0.88
CHD1L-206ENST00000469625 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
CHD1L-206ENST00000469625 EFCAB2Q5VUJ9 269 aa9.54□□□□□ -0.88
CHD1L-206ENST00000469625 RICTORQ6R327 1708 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 MTUS2Q5JR59 1369 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 ARHGEF40Q8TER5 1519 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 POGZQ7Z3K3 1410 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 VPS8Q8N3P4 1428 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
CHD1L-206ENST00000469625 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
CHD1L-206ENST00000469625 ZFYVE16Q7Z3T8 1539 aa9.51□□□□□ -0.89
CHD1L-206ENST00000469625 ZNF518AQ6AHZ1 1483 aa9.51□□□□□ -0.89
CHD1L-206ENST00000469625 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
CHD1L-206ENST00000469625 CDC42BPBQ9Y5S2 1711 aa9.5□□□□□ -0.89
CHD1L-206ENST00000469625 ABCC1P33527 1531 aa9.5□□□□□ -0.89
CHD1L-206ENST00000469625 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
CHD1L-206ENST00000469625 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
CHD1L-206ENST00000469625 CDC42BPAQ5VT25 1732 aa9.49□□□□□ -0.89
CHD1L-206ENST00000469625 GPATCH8Q9UKJ3 1502 aaKnown RBP9.48□□□□□ -0.89
CHD1L-206ENST00000469625 ABCB7O75027 752 aa9.48□□□□□ -0.89
CHD1L-206ENST00000469625 KDM5CP41229 1560 aa9.48□□□□□ -0.89
CHD1L-206ENST00000469625 YEATS2Q9ULM3 1422 aa9.48□□□□□ -0.89
CHD1L-206ENST00000469625 BCANQ96GW7 911 aa9.47□□□□□ -0.89
CHD1L-206ENST00000469625 ITSN2Q9NZM3 1697 aa9.47□□□□□ -0.89
CHD1L-206ENST00000469625 ARID4BQ4LE39 1312 aaPredicted RBP9.47□□□□□ -0.89
CHD1L-206ENST00000469625 SAMD9LQ8IVG5 1584 aa9.46□□□□□ -0.89
CHD1L-206ENST00000469625 HECW2Q9P2P5 1572 aa9.46□□□□□ -0.89
CHD1L-206ENST00000469625 SUPT6HQ7KZ85 1726 aaKnown RBP9.46□□□□□ -0.89
CHD1L-206ENST00000469625 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
CHD1L-206ENST00000469625 ZNF777Q9ULD5 760 aaPredicted RBP9.46□□□□□ -0.9
CHD1L-206ENST00000469625 PLEKHH2Q8IVE3 1493 aa9.46□□□□□ -0.9
CHD1L-206ENST00000469625 MAP3K1Q13233 1512 aa9.46□□□□□ -0.9
CHD1L-206ENST00000469625 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.9
CHD1L-206ENST00000469625 C9orf84Q5VXU9 1444 aa9.45□□□□□ -0.9
CHD1L-206ENST00000469625 NCOA2Q15596 1464 aa9.45□□□□□ -0.9
CHD1L-206ENST00000469625 LRRC9Q6ZRR7 1453 aa9.45□□□□□ -0.9
CHD1L-206ENST00000469625 ARHGEF12Q9NZN5 1544 aa9.45□□□□□ -0.9
CHD1L-206ENST00000469625 DSG3P32926 999 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 POLA2Q14181 598 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 AFAP1Q8N556 730 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 TRAPPC8Q9Y2L5 1435 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 ATP10AO60312 1499 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 BCORL1Q5H9F3 1711 aa9.44□□□□□ -0.9
CHD1L-206ENST00000469625 ADAMTSL3P82987 1691 aa9.43□□□□□ -0.9
CHD1L-206ENST00000469625 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
CHD1L-206ENST00000469625 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
CHD1L-206ENST00000469625 DIP2CQ9Y2E4 1556 aa9.42□□□□□ -0.9
CHD1L-206ENST00000469625 ABCA6Q8N139 1617 aa9.42□□□□□ -0.9
CHD1L-206ENST00000469625 MADDQ8WXG6 1647 aa9.42□□□□□ -0.9
CHD1L-206ENST00000469625 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
CHD1L-206ENST00000469625 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
CHD1L-206ENST00000469625 SIGLEC1Q9BZZ2 1709 aa9.4□□□□□ -0.9
CHD1L-206ENST00000469625 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
CHD1L-206ENST00000469625 PRKCSHP14314 528 aaPredicted RBP9.4□□□□□ -0.9
CHD1L-206ENST00000469625 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHD1L-206ENST00000469625 ATP7AQ04656 1500 aa9.4□□□□□ -0.91
CHD1L-206ENST00000469625 PTPRMP28827 1452 aa9.4□□□□□ -0.91
CHD1L-206ENST00000469625 CAMSAP2Q08AD1 1489 aa9.4□□□□□ -0.91
CHD1L-206ENST00000469625 INO80Q9ULG1 1556 aaPredicted RBP9.39□□□□□ -0.91
CHD1L-206ENST00000469625 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms